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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3539741..3542487- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005729-T1 ID=KJC3_005729-T1|Name=KJC3_005729-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2747bp|location=Sequence derived from alignment at ch4:3539741..3542487- (Aspergillus niger KJC3)
CAGCTTCTCGGGCAACAAAGGTAATGATGTCCAGCACATACGAACCCCAG
CCAACTTACCCGGCGGAGTGGCTGAACCAGTATGCTCTCTCAGACGTGGT
CTCGGCAGTGCCGGTGAAAGAAGATACTGGAATGAAAGACGGAGTAGGTC
CTGACATTCATGCTCTAGATATGGTGGGCAGTGCTAACGATGGAGGTGCT
GCGTGGACGATAGGATACTGGCTATCAGCGAAAAGTGTATATGACCTCTG
CTGATATCGTCAATTCCCTGGACAAGGTCTCAGTAATGTACAAGTACACA
GATGTTCTGGCATTCGACTCTGCAGAAACGACCCTTTCGTCCACCACGGA
CAGTATGTTAGTCCTGGCTGCGCGGGTCCTGACTGCCGACGGCCCCGTGA
CTCTCAAGGTTAACCCTGCCCAATACACGGGCTGTGTGCTCCGGATCTAT
GTCTCTATCCTGGACCAGCCGGTGACGGTGCAGAGTCCTGACGCATCGCA
GAGTATCCGTTTGGAATTGGGTCCGGGGACGAATCATGTCGGGGCGGCAG
TCACCGTCCAGACGGACAGTATCAGTGTCGCGTACTACCAGCAATATTTC
GACCTCCCGGATGAGGTCTTCGAGGCCTCATTAGCGACACAATTACGGAT
TGCACAAGCGCTATTCTGGCAGAAGCCTTCCATCGCTATGTCATTGTGTG
CCTACGTGGCTACCGCAACGGCCCGTCCCGCGCTTTACCCGGCGCTCAAT
ACGCAGGCAGTTTCCCTGGGCCAGCAATTAGCTGCCCAGGCCATGACCGG
TCCTGACACCTCGTATGCTCCTGCTTTGACTATTAGCCAGTACCGCCAAA
CTGTAGAGGATGCCATCAATGCCCTGGAGGCATTTCAGACGCAGTACGAG
CGTTTTCACGATGAAAAGGCCAGTGTCGACGATCACAAGGCGGCTTGGAC
CACCATGCTCCAGCAAGCCATCAATCAACAAGCCTTGCGTGAGCAGGCTC
GAGATTTGGCCTCCGACAAGTACTCTGATGCCTGTGTCACTCGAGACAGC
TGCTATAATCTGGTCACCTCGGGCCGCCAGGAGTTGGAGTCCGCCCGGAA
AAAGTTTGAGGACGCCCTGGTAGCCTGGGAAGAAAAGCAAGCGTTCCTTG
GCGTGTATGGCCTTTTGTCTGGGATCCTAACATTCGGCGAAAAGTTGTAC
GGTATCTCTGCAGCTTCCGCCCTGGACGATGTGCTGAAAGCAATAGATGG
CGCAAAGGACATCATCGATAAAGTGAAAGAAGCAGAGAAGATCACTGCTG
CAGAGGATCGACGCATCTCCGCCGATACTTTGCAGAAGCTTACGGAGTGC
ATGGGTCCTCTGGAAAATCTGTATTTCTCTATGGTTACAGTCGCTGCGGC
GATCAAGGAATTGGAAACTGATCCAAATGCGGCGATTCCATCGGTGGACG
GTATTTCCGGCACCAGCCAAGGAGATGCCGATGCGAACCTGATCATCACG
TTAGCTGCATGGGATTCTTGGAACGTGAGCTCTGTTGCGCAGCTGGAATT
TGCGGTCGCCCATTCCATCCCAAACGCTGCTGCTTACCGGTTGGCTGTTC
AGAAATATAGCATTAACGGGAAGGCGCTGGCTCAGGCGGATGCTCAAGCC
ACCAAGGCAGGACAGGAATATGTGCTGGCAGAGATGGAAGTGATTACCAG
TCAGAAGGATATCAAAGAGCTGCAAGAGCTGATTGCCAAGTATACCGGTG
AAGAAGAGCTGTATGCTACAGCCGAAGCGAAGTTCTACAATTCCTATCTG
TTCATGCAAACCTCGGTGGCTATGGAGATGCGCAATATGGCATGGGCATA
CAAATACTGGGCGCTGGAAGACAGCCCTTTAGTGCTGGACTCACAAAAGA
CCACAGCCCAATTTCGCAGTGATGTGTATCTCATTGATGAAGCGATGAAT
GCCGTCAACTCCAAGTACGACCGAATCCTGCAGTGTAAGTAGGCGCCTGC
AAATATTCTTCCACCTTCGCCAAAACCCACTGACAACTTCATCCCCAGTA
CTCACACAAACTGTGTCATCCAACGACGTAAGTTCTACCGCCTCCTATCC
AAGGGCCGACATAGTATTTCTGACAAAGCTACAGCTTCCATCCAATTACG
GCCAACTATTACTCTCCGGCCTCCAAAGCGAGACCCACAGCGCCAGTTTC
ACCCTCACTCCAAGCACCGATCCAGACAGTGAGCCCAGCTTCGCCAGCAT
CTTCACAGACGGGTCACACTTCCGCGCAGCCGGCCTAGTAGCCTATCTCC
GGGGCGCGCGTCCACGGTCGGAGAGTCTCCAGAATGGGGTGTACCGCGTC
AACCTCAATCTCTCGACCTCGGGTCTGTATGCGGATATCCAAGATGGTAA
GATCTTTCATTTCACTCGTGCGCCGCAGACTGCCCGAGTGTCTTATGACA
TTGATGCCGATGGCGAAATCGGCGAAATCCATATCGACGGTTCGTTTGGG
GACGAGGTCCATGCGTATCCGACTGTCTTTACTCAGTGGACTATCCAGTT
GTTGGATGGCGACGAGCTGGATTTGAGTCAGCTTACGGGGGTGGATTTGG
CGTGGAGAGTCTACGCGAGGTTTGACTAGGTGGCTGGCCATAGCCAGGAC
TGGACGGATTTATTTTGCCGCAGATACGAATTTCTTGCTGAATAATGATA
TAAGTTTCATAGCGTCGAGCGTGAGCTCTATATGAGAGTGGATAGAT back to topCoding sequence (CDS) from alignment at ch4:3539741..3542487- >KJC3_005729-T1 ID=KJC3_005729-T1|Name=KJC3_005729-T1|organism=Aspergillus niger KJC3|type=CDS|length=3798bp|location=Sequence derived from alignment at ch4:3539741..3542487- (Aspergillus niger KJC3)
GATACTGGCTATCAGCGAAAAGTGTATATGACCTCTGCTGATATCGTCAA
TTCCCTGGACAAGGTCTCAGTAATGTACAAGTACACAGATGTTCTGGCAT
TCGACTCTGCAGAAACGACCCTTTCGTCCACCACGGACAGTATGTTAGTC
CTGGCTGCGCGGGTCCTGACTGCCGACGGCCCCGTGACTCTCAAGGTTAA
CCCTGCCCAATACACGGGCTGTGTGCTCCGGATCTATGTCTCTATCCTGG
ACCAGCCGGTGACGGTGCAGAGTCCTGACGCATCGCAGAGTATCCGTTTG
GAATTGGGTCCGGGGACGAATCATGTCGGGGCGGCAGTCACCGTCCAGAC
GGACAGTATCAGTGTCGCGTACTACCAGCAATATTTCGACCTCCCGGATG
AGGTCTTCGAGGCCTCATTAGCGACACAATTACGGATTGCACAAGCGCTA
TTCTGGCAGAAGCCTTCCATCGCTATGTCATTGTGTGCCTACGTGGCTAC
CGCAACGGCCCGTCCCGCGCTTTACCCGGCGCTCAATACGCAGGCAGTTT
CCCTGGGCCAGCAATTAGCTGCCCAGGCCATGACCGGTCCTGACACCTCG
TATGCTCCTGCTTTGACTATTAGCCAGTACCGCCAAACTGTAGAGGATGC
CATCAATGCCCTGGAGGCATTTCAGACGCAGTACGAGCGTTTTCACGATG
AAAAGGCCAGTGTCGACGATCACAAGGCGGCTTGGACCACCATGCTCCAG
CAAGCCATCAATCAACAAGCCTTGCGTGAGCAGGCTCGAGATTTGGCCTC
CGACAAGTACTCTGATGCCTGTGTCACTCGAGACAGCTGCTATAATCTGG
TCACCTCGGGCCGCCAGGAGTTGGAGTCCGCCCGGAAAAAGTTTGAGGAC
GCCCTGGTAGCCTGGGAAGAAAAGCAAGCGTTCCTTGGCGTGTATGGCCT
TTTGTCTGGGATCCTAACATTCGGCGAAAAGTTGTACGGTATCTCTGCAG
CTTCCGCCCTGGACGATGTGCTGAAAGCAATAGATGGCGCAAAGGACATC
ATCGATAAAGTGAAAGAAGCAGAGAAGATCACTGCTGCAGAGGATCGACG
CATCTCCGCCGATACTTTGCAGAAGCTTACGGAGTGCATGGGTCCTCTGG
AAAATCTGTATTTCTCTATGGTTACAGTCGCTGCGGCGATCAAGGAATTG
GAAACTGATCCAAATGCGGCGATTCCATCGGTGGACGGTATTTCCGGCAC
CAGCCAAGGAGATGCCGATGCGAACCTGATCATCACGTTAGCTGCATGGG
ATTCTTGGAACGTGAGCTCTGTTGCGCAGCTGGAATTTGCGGTCGCCCAT
TCCATCCCAAACGCTGCTGCTTACCGGTTGGCTGTTCAGAAATATAGCAT
TAACGGGAAGGCGCTGGCTCAGGCGGATGCTCAAGCCACCAAGGCAGGAC
AGGAATATGTGCTGGCAGAGATGGAAGTGATTACCAGTCAGAAGGATATC
AAAGAGCTGCAAGAGCTGATTGCCAAGTATACCGGTGAAGAAGAGCTGTA
TGCTACAGCCGAAGCGAAGTTCTACAATTCCTATCTGTTCATGCAAACCT
CGGTGGCTATGGAGATGCGCAATATGGCATGGGCATACAAATACTGGGCG
CTGGAAGACAGCCCTTTAGTGCTGGACTCACAAAAGACCACAGCCCAATT
TCGCAGTGATGTGTATCTCATTGATGAAGCGATGAATGCCGTCAACTCCA
AGTACGACCGAATCCTGCAGTGTAAGTAGATGATGTCCAGCACATACGAA
CCCCAGCCAACTTACCCGGCGGAGTGGCTGAACCAGTATGCTCTCTCAGA
CGTGGTCTCGGCAGTGCCGGTGAAAGAAGATACTGGAATGAAAGACGGAG
ATACTGGCTATCAGCGAAAAGTGTATATGACCTCTGCTGATATCGTCAAT
TCCCTGGACAAGGTCTCAGTAATGTACAAGTACACAGATGTTCTGGCATT
CGACTCTGCAGAAACGACCCTTTCGTCCACCACGGACAGTATGTTAGTCC
TGGCTGCGCGGGTCCTGACTGCCGACGGCCCCGTGACTCTCAAGGTTAAC
CCTGCCCAATACACGGGCTGTGTGCTCCGGATCTATGTCTCTATCCTGGA
CCAGCCGGTGACGGTGCAGAGTCCTGACGCATCGCAGAGTATCCGTTTGG
AATTGGGTCCGGGGACGAATCATGTCGGGGCGGCAGTCACCGTCCAGACG
GACAGTATCAGTGTCGCGTACTACCAGCAATATTTCGACCTCCCGGATGA
GGTCTTCGAGGCCTCATTAGCGACACAATTACGGATTGCACAAGCGCTAT
TCTGGCAGAAGCCTTCCATCGCTATGTCATTGTGTGCCTACGTGGCTACC
GCAACGGCCCGTCCCGCGCTTTACCCGGCGCTCAATACGCAGGCAGTTTC
CCTGGGCCAGCAATTAGCTGCCCAGGCCATGACCGGTCCTGACACCTCGT
ATGCTCCTGCTTTGACTATTAGCCAGTACCGCCAAACTGTAGAGGATGCC
ATCAATGCCCTGGAGGCATTTCAGACGCAGTACGAGCGTTTTCACGATGA
AAAGGCCAGTGTCGACGATCACAAGGCGGCTTGGACCACCATGCTCCAGC
AAGCCATCAATCAACAAGCCTTGCGTGAGCAGGCTCGAGATTTGGCCTCC
GACAAGTACTCTGATGCCTGTGTCACTCGAGACAGCTGCTATAATCTGGT
CACCTCGGGCCGCCAGGAGTTGGAGTCCGCCCGGAAAAAGTTTGAGGACG
CCCTGGTAGCCTGGGAAGAAAAGCAAGCGTTCCTTGGCGTGTATGGCCTT
TTGTCTGGGATCCTAACATTCGGCGAAAAGTTGTACGGTATCTCTGCAGC
TTCCGCCCTGGACGATGTGCTGAAAGCAATAGATGGCGCAAAGGACATCA
TCGATAAAGTGAAAGAAGCAGAGAAGATCACTGCTGCAGAGGATCGACGC
ATCTCCGCCGATACTTTGCAGAAGCTTACGGAGTGCATGGGTCCTCTGGA
AAATCTGTATTTCTCTATGGTTACAGTCGCTGCGGCGATCAAGGAATTGG
AAACTGATCCAAATGCGGCGATTCCATCGGTGGACGGTATTTCCGGCACC
AGCCAAGGAGATGCCGATGCGAACCTGATCATCACGTTAGCTGCATGGGA
TTCTTGGAACGTGAGCTCTGTTGCGCAGCTGGAATTTGCGGTCGCCCATT
CCATCCCAAACGCTGCTGCTTACCGGTTGGCTGTTCAGAAATATAGCATT
AACGGGAAGGCGCTGGCTCAGGCGGATGCTCAAGCCACCAAGGCAGGACA
GGAATATGTGCTGGCAGAGATGGAAGTGATTACCAGTCAGAAGGATATCA
AAGAGCTGCAAGAGCTGATTGCCAAGTATACCGGTGAAGAAGAGCTGTAT
GCTACAGCCGAAGCGAAGTTCTACAATTCCTATCTGTTCATGCAAACCTC
GGTGGCTATGGAGATGCGCAATATGGCATGGGCATACAAATACTGGGCGC
TGGAAGACAGCCCTTTAGTGCTGGACTCACAAAAGACCACAGCCCAATTT
CGCAGTGATGTGTATCTCATTGATGAAGCGATGAATGCCGTCAACTCCAA
GTACGACCGAATCCTGCAGTGTAAGTAGATGATGTCCAGCACATACGAAC
CCCAGCCAACTTACCCGGCGGAGTGGCTGAACCAGTATGCTCTCTCAGAC
GTGGTCTCGGCAGTGCCGGTGAAAGAAGATACTGGAATGAAAGACGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005729-T1.utr3p1 | KJC3_005729-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005729-T1.utr5p1 | KJC3_005729-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3539741..3542487 - |
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