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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3596917..3598024+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005747-T1 ID=KJC3_005747-T1|Name=KJC3_005747-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1108bp|location=Sequence derived from alignment at ch4:3596917..3598024+ (Aspergillus niger KJC3)
ATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCG
GGAAGACCTTCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTC
TCGAGTGGTTCGAGAAGGTATGTGCCGACCTCCCTAAGTTTTCGCCCCCA
AAGTCAATCTCTAATCCTTATTTCTCTTCAATAGGCCCTCAATGTCAACG
TCCCCGGTGGAAAGCTCAACCGTGGTCTCTCCGTCCCCGACACCGGTCTC
GCTCTCCTGAAGAAGCCCCTGACCGATGAGCAATTCAAGCACCTCAGTCT
GCTGGGCTGGCTCACCGAGCTGCTTCAGGCCTTCTTCCTGGTCAGCGACG
ACATCATGGACGGCTCCATCACCCGTCGCGGCCAGCCCTGCTGGTACAAG
CACGAAGGAGTCGGACTGATCGCTATCAACGACGCCTTCCTGCTCGAGTC
TGGCATCTACATTATCCTGAAGAAGTACTTCCGCTCTCACCCCGCCTACA
TCGACCTCGTCGAGCTCTTCCACGAGACCACCTACCAGACCGAGCTGGGC
CAGCTGTGTGACCTGATCACCGCCCCCGAGGACAACGTCAACCTCGACAA
CTTCTCCATGGAGAAGTACATGTTCATCGTCACCTACAAGACCGCCTACT
ACAGCTTCTACCTCCCCGTTGCTCTGGCCCTGCACTACCTCCAGCTCGCT
ACCCCCGAGAACCTGCGTCAGGCCCACGACATCCTCATCCCCCTGGGTCA
GTACTTCCAGGTCCAGGATGACTACCTTGATGCCTACGGTGACCCCGCCT
TCATTGGCAAGATTGGTACCGATATCCAGGATAACAAGTGCTCGTGGTTG
GTCAACCAGGCTCTGCAGCGTTGCAACGCTGAGCAGCGCAAGGTCCTTGA
CACTGCTTACGGTCGTAAGGACGCTGAGCTGGAGGCCAAGGTCAAGGCCC
TGTACAAGGAGCTCGACTTGGAGAAGATCTACAAGGAATACGAGGAGAGC
GTTGTTGGTGAAATCCGCACCAAGATCAACAGCATCAACGAGTCGGAGGG
TCTGAAGAAGGAGGTCTTCGAGGCCTTCCTCGCGAAGATCTACAAGCGCA
CTAAATAA back to topCoding sequence (CDS) from alignment at ch4:3596917..3598024+ >KJC3_005747-T1 ID=KJC3_005747-T1|Name=KJC3_005747-T1|organism=Aspergillus niger KJC3|type=CDS|length=2082bp|location=Sequence derived from alignment at ch4:3596917..3598024+ (Aspergillus niger KJC3)
ATGTCCACCACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCG
GGAAGACCTTCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTC
TCGAGTGGTTCGAGAAGGCCCTCAATGTCAACGTCCCCGGTGGAAAGCTC
AACCGTGGTCTCTCCGTCCCCGACACCGGTCTCGCTCTCCTGAAGAAGCC
CCTGACCGATGAGCAATTCAAGCACCTCAGTCTGCTGGGCTGGCTCACCG
AGCTGCTTCAGGCCTTCTTCCTGGTCAGCGACGACATCATGGACGGCTCC
ATCACCCGTCGCGGCCAGCCCTGCTGGTACAAGCACGAAGGAGTCGGACT
GATCGCTATCAACGACGCCTTCCTGCTCGAGTCTGGCATCTACATTATCC
TGAAGAAGTACTTCCGCTCTCACCCCGCCTACATCGACCTCGTCGAGCTC
TTCCACGAGACCACCTACCAGACCGAGCTGGGCCAGCTGTGTGACCTGAT
CACCGCCCCCGAGGACAACGTCAACCTCGACAACTTCTCCATGGAGAAGT
ACATGTTCATCGTCACCTACAAGACCGCCTACTACAGCTTCTACCTCCCC
GTTGCTCTGGCCCTGCACTACCTCCAGCTCGCTACCCCCGAGAACCTGCG
TCAGGCCCACGACATCCTCATCCCCCTGGGTCAGTACTTCCAGGTCCAGG
ATGACTACCTTGATGCCTACGGTGACCCCGCCTTCATTGGCAAGATTGGT
ACCGATATCCAGGATAACAAGTGCTCGTGGTTGGTCAACCAGGCTCTGCA
GCGTTGCAACGCTGAGCAGCGCAAGGTCCTTGACACTGCTTACGGTCGTA
AGGACGCTGAGCTGGAGGCCAAGGTCAAGGCCCTGTACAAGGAGCTCGAC
TTGGAGAAGATCTACAAGGAATACGAGGAGAGCGTTGTTGGTGAAATCCG
CACCAAGATCAACAGCATCAACGAGTCGGAGGGTCTGAAGAAGGAGGTCT
TCGAGGCCTTCCTCGCGAAGATCTACAAGCGCACTAAATAAATGTCCACC
ACTGCCCGTGCCGATTTCGAGGCCGTCTTCCCCTCTTTGCGGGAAGACCT
TCTGAACTATGCGAAGCAGTACAAGCTGCCCCAGAACGCTCTCGAGTGGT
TCGAGAAGGCCCTCAATGTCAACGTCCCCGGTGGAAAGCTCAACCGTGGT
CTCTCCGTCCCCGACACCGGTCTCGCTCTCCTGAAGAAGCCCCTGACCGA
TGAGCAATTCAAGCACCTCAGTCTGCTGGGCTGGCTCACCGAGCTGCTTC
AGGCCTTCTTCCTGGTCAGCGACGACATCATGGACGGCTCCATCACCCGT
CGCGGCCAGCCCTGCTGGTACAAGCACGAAGGAGTCGGACTGATCGCTAT
CAACGACGCCTTCCTGCTCGAGTCTGGCATCTACATTATCCTGAAGAAGT
ACTTCCGCTCTCACCCCGCCTACATCGACCTCGTCGAGCTCTTCCACGAG
ACCACCTACCAGACCGAGCTGGGCCAGCTGTGTGACCTGATCACCGCCCC
CGAGGACAACGTCAACCTCGACAACTTCTCCATGGAGAAGTACATGTTCA
TCGTCACCTACAAGACCGCCTACTACAGCTTCTACCTCCCCGTTGCTCTG
GCCCTGCACTACCTCCAGCTCGCTACCCCCGAGAACCTGCGTCAGGCCCA
CGACATCCTCATCCCCCTGGGTCAGTACTTCCAGGTCCAGGATGACTACC
TTGATGCCTACGGTGACCCCGCCTTCATTGGCAAGATTGGTACCGATATC
CAGGATAACAAGTGCTCGTGGTTGGTCAACCAGGCTCTGCAGCGTTGCAA
CGCTGAGCAGCGCAAGGTCCTTGACACTGCTTACGGTCGTAAGGACGCTG
AGCTGGAGGCCAAGGTCAAGGCCCTGTACAAGGAGCTCGACTTGGAGAAG
ATCTACAAGGAATACGAGGAGAGCGTTGTTGGTGAAATCCGCACCAAGAT
CAACAGCATCAACGAGTCGGAGGGTCTGAAGAAGGAGGTCTTCGAGGCCT
TCCTCGCGAAGATCTACAAGCGCACTAAATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0008299 | isoprenoid biosynthetic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG092633US |
| DBxref | InterPro:IPR033749 |
| DBxref | InterPro:IPR000092 |
| DBxref | InterPro:IPR008949 |
| DBxref | PFAM:PF00348 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3596917..3598024 + |
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