You are here

Home

KJC3_005756-T1, KJC3_005756-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005756-T1
Unique NameKJC3_005756-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3623532..3625748+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005756-T1 ID=KJC3_005756-T1|Name=KJC3_005756-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2217bp|location=Sequence derived from alignment at ch4:3623532..3625748+ (Aspergillus niger KJC3)
ACTTATACAACTCCACCTCCACGTCCACGTCCACGTCCACGCTCGCGCTT
CCCTCCCCTCACTCGTCTACTTAAAATTCTTTTTCTCTATTTGACTTTTC
CACCCCTACGCTTGAAACCCGTTCAGCTGCATGTTTCGACTGCCGTGCAG
AAACCTTGGAATGAGCCTTGAATGACCCAACAGCCCACCGTTTCCTGCCC
TCCATTTTTAGGCATTCTCGGTTGACGCTGCCTACCACCACCTGCCTTTT
AGCAACCCTTGCCTCCTCCAACTCTTATATCTCCTCGCCCGGTCCCCTCG
TTCTCTAGTCCTGTCACTTCTATTGTCATTGTCTTTGTCCCCTTCTAGTC
TGGACTTCGAGACTGGGTCGTGGATTAACCTTAACTGCTTTATCCATCCT
ATCCATTCACTCAGCCTCTCCCGCTCCAATCCTGACCGTCGATCTTCTTC
CCTCCTCAGACCGCCAATCACCCCCACTCACTCCCTCGACGCGACCAAAA
CATCTCGTCTGCAACCACGGCCTCGTTATCTGTCTATACACCCCCTTCGG
TTCACTTGATCCTGTGTTCCTCGTCCATTCCGGCCTATCTACAGCATGGC
CGCTCTCACCATGACCCCTACCACTATGCGGCAGCCATTCGCCAGCTTGG
ACGCGCCACGCATGCGCTCCTTGCTCAAGACTAGAATGAACATGAAGAAC
AAGCAAGATGGTATGGACACTTGAACCTTCGCCCCATGCTCATCACGCGC
ATTATAGCTAACATACATTACTATAGGTGCCATTCTCTCGGGAAAGAGAC
AGCCCCTGTCGGACGTGGACTCGGAGAATATCGACCCAACCACTTTCAAA
CAATCCACCAAACGCAAGCGTGGTGCCGACGATGATGACCTGGAACCTGC
CAAGGAACCCTGCAAGCCCTTCAAAACCTCTCGCATGGTTCTGACCACCG
TGAAGTCGACCACCGTCACTCCTCGCAAGCCAACCACACCCACCAAACCC
ACCGTGTCTACCCCCAAGTCCGCTCCCAACCTGAGGCCGGCCGGACGTTC
ACCACCGCCCAAGTCTTGCAAGCCATTCTCTCGCCGCTCTACTATTGCTA
AAAGCCGTCCCGAGTCCGTCAATCGCAAGTCCGTCCACCGCCCATTCTCC
CTTGCAACCGCTCTGTCTGGCGCAAAGGCAAAGAGTCAGCCCACCCCCAA
AGCTCCTGCTTCCTGGTCATTCGATATCCATGTCGACACCGAACAGGAAG
AGATGACCAACCTCATGCAACACTCCACCTGTGTCCTAGACATCAGCGAT
CAGGAAGGTAAAGTGGAGACTTCCGGTCGAGGCAAAGAGAACGTTCCTCC
AGCAGAACTCGGAATCGACCTTCCTCGTTCTCGTCAGCAGGAGTCCCCCG
CGGCTGCGGCACGCAAGTCTGTCATGCTGGAAGAGTCTCGTGAGCCGTTG
GGTGACCTCAATGCTGCTGACTACTACGGTGATGACTGCCATGCCTTCTC
CTATGCCGTTGTCTATGATGACGAGACCGAGGAGAATGCGAAGAAGGCCC
CTTCAGTACCACGCTCAAACCCCAACACCACCCGGAGCAAGCTCTCCAAC
GTCTCTTCCGTCTCTTCCTTGCTTGAAGCAACCACCCCTGTCAAGCCTAC
CGCTGAAGCCGAAGTCGAACCTTCTGAGGCGGCTATCGAAATCTGGGAGA
GCGAGAGTGCTGCGGAAGAAGCCGCCGATGCCAACTGAATCTGCGGCCAC
CACTTCATAGCTCACCACTGACTATCGCCCATCATCCATACCAACAAGAG
TTATATCACACGGCGTTCGGATTACCTCAGGGTTGTACAGCATCGTTTTT
GGATACCCTACTTATACAGTCTTTTTGATTTCGTTTGGAGCCCGTTTTAT
ACCGACCAGATCCGTCACGAGACGAATTTTCTTGAGTCTTTTTCCTATTA
TCATGTCCAGAACCTACACCATACCCTCCTAGTCGACTTTCTACATTTAT
CCGAACTACTACCTACCTCGACACGAGTCACTATCATTGGCCTGAAGTAT
AATGGCCCCCTCCGTCACCTCACTCTTTTGCGCATCTGATGAATGCCGCG
TCCATTACCTACCTCCTAATGACCTAAGAATGTGTTACGTCGCTTAATGC
CTGTATGAGATACATACCCTCAGTTTAATCAAAAGCAAAAAAAGAGAGAA
TGAGAATAAGAATAAAT
back to top

Coding sequence (CDS) from alignment at ch4:3623532..3625748+

>KJC3_005756-T1 ID=KJC3_005756-T1|Name=KJC3_005756-T1|organism=Aspergillus niger KJC3|type=CDS|length=2154bp|location=Sequence derived from alignment at ch4:3623532..3625748+ (Aspergillus niger KJC3)
ATGGCCGCTCTCACCATGACCCCTACCACTATGCGGCAGCCATTCGCCAG
CTTGGACGCGCCACGCATGCGCTCCTTGCTCAAGACTAGAATGAACATGA
AGAACAAGCAAGATGGTGCCATTCTCTCGGGAAAGAGACAGCCCCTGTCG
GACGTGGACTCGGAGAATATCGACCCAACCACTTTCAAACAATCCACCAA
ACGCAAGCGTGGTGCCGACGATGATGACCTGGAACCTGCCAAGGAACCCT
GCAAGCCCTTCAAAACCTCTCGCATGGTTCTGACCACCGTGAAGTCGACC
ACCGTCACTCCTCGCAAGCCAACCACACCCACCAAACCCACCGTGTCTAC
CCCCAAGTCCGCTCCCAACCTGAGGCCGGCCGGACGTTCACCACCGCCCA
AGTCTTGCAAGCCATTCTCTCGCCGCTCTACTATTGCTAAAAGCCGTCCC
GAGTCCGTCAATCGCAAGTCCGTCCACCGCCCATTCTCCCTTGCAACCGC
TCTGTCTGGCGCAAAGGCAAAGAGTCAGCCCACCCCCAAAGCTCCTGCTT
CCTGGTCATTCGATATCCATGTCGACACCGAACAGGAAGAGATGACCAAC
CTCATGCAACACTCCACCTGTGTCCTAGACATCAGCGATCAGGAAGGTAA
AGTGGAGACTTCCGGTCGAGGCAAAGAGAACGTTCCTCCAGCAGAACTCG
GAATCGACCTTCCTCGTTCTCGTCAGCAGGAGTCCCCCGCGGCTGCGGCA
CGCAAGTCTGTCATGCTGGAAGAGTCTCGTGAGCCGTTGGGTGACCTCAA
TGCTGCTGACTACTACGGTGATGACTGCCATGCCTTCTCCTATGCCGTTG
TCTATGATGACGAGACCGAGGAGAATGCGAAGAAGGCCCCTTCAGTACCA
CGCTCAAACCCCAACACCACCCGGAGCAAGCTCTCCAACGTCTCTTCCGT
CTCTTCCTTGCTTGAAGCAACCACCCCTGTCAAGCCTACCGCTGAAGCCG
AAGTCGAACCTTCTGAGGCGGCTATCGAAATCTGGGAGAGCGAGAGTGCT
GCGGAAGAAGCCGCCGATGCCAACTGAATGGCCGCTCTCACCATGACCCC
TACCACTATGCGGCAGCCATTCGCCAGCTTGGACGCGCCACGCATGCGCT
CCTTGCTCAAGACTAGAATGAACATGAAGAACAAGCAAGATGGTGCCATT
CTCTCGGGAAAGAGACAGCCCCTGTCGGACGTGGACTCGGAGAATATCGA
CCCAACCACTTTCAAACAATCCACCAAACGCAAGCGTGGTGCCGACGATG
ATGACCTGGAACCTGCCAAGGAACCCTGCAAGCCCTTCAAAACCTCTCGC
ATGGTTCTGACCACCGTGAAGTCGACCACCGTCACTCCTCGCAAGCCAAC
CACACCCACCAAACCCACCGTGTCTACCCCCAAGTCCGCTCCCAACCTGA
GGCCGGCCGGACGTTCACCACCGCCCAAGTCTTGCAAGCCATTCTCTCGC
CGCTCTACTATTGCTAAAAGCCGTCCCGAGTCCGTCAATCGCAAGTCCGT
CCACCGCCCATTCTCCCTTGCAACCGCTCTGTCTGGCGCAAAGGCAAAGA
GTCAGCCCACCCCCAAAGCTCCTGCTTCCTGGTCATTCGATATCCATGTC
GACACCGAACAGGAAGAGATGACCAACCTCATGCAACACTCCACCTGTGT
CCTAGACATCAGCGATCAGGAAGGTAAAGTGGAGACTTCCGGTCGAGGCA
AAGAGAACGTTCCTCCAGCAGAACTCGGAATCGACCTTCCTCGTTCTCGT
CAGCAGGAGTCCCCCGCGGCTGCGGCACGCAAGTCTGTCATGCTGGAAGA
GTCTCGTGAGCCGTTGGGTGACCTCAATGCTGCTGACTACTACGGTGATG
ACTGCCATGCCTTCTCCTATGCCGTTGTCTATGATGACGAGACCGAGGAG
AATGCGAAGAAGGCCCCTTCAGTACCACGCTCAAACCCCAACACCACCCG
GAGCAAGCTCTCCAACGTCTCTTCCGTCTCTTCCTTGCTTGAAGCAACCA
CCCCTGTCAAGCCTACCGCTGAAGCCGAAGTCGAACCTTCTGAGGCGGCT
ATCGAAATCTGGGAGAGCGAGAGTGCTGCGGAAGAAGCCGCCGATGCCAA
CTGA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005756KJC3_005756Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005756-T1.utr5p1KJC3_005756-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005756-T1.exon1KJC3_005756-T1.exon1Aspergillus niger KJC3exon
KJC3_005756-T1.exon2KJC3_005756-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005756-T1.cdsKJC3_005756-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005756-T1.utr3p1KJC3_005756-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005756-T1KJC3_005756-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3623532..3625748 +
Powered by Drupal