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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3721971..3723974- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005785-T1 ID=KJC3_005785-T1|Name=KJC3_005785-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2004bp|location=Sequence derived from alignment at ch4:3721971..3723974- (Aspergillus niger KJC3)
AGGGTTTTCATGCGCTACTTAAACGATAGTAATCATTGCACGGGTGTCTG
CCTTCCAATGCATGACGACCGCTCAAGATATGGAGGAAACATACCGCTCC
AACTATCCAAGCAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACTCA
AGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAACG
CCAACATGGAGGAATACACGACGGAAACCACCACAGGAGAGATCATCAAG
CCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTAAC
CTTCAGTATCGACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTTCA
AATGGTATTGTACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTTTT
GCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTCGG
CGTTTCTCGAGAAGTTAGCCTTGTTGTTGTTACTGTTTTTGTCATCGGCT
TTGGTGTTGGTAAGTCATCTTAGTAATTTTGCTTCGATATGGTCACTGAC
TGCGCTCAGGTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCCGG
CGGATTATATACGCATCCACACTTTTCTTAGCTGTCATATTCATTATTCC
CTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCATTG
ATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGGCG
GATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCAGC
CAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCTTG
CAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTGCA
TTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGAGACATATGCGCC
AACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGACC
CTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGAAG
TTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCGAT
TGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACGGTTTACTATACA
TGTTCTTCGTTGCGTAAGTGGTGTGCTATCTGATACTATTACTATCTTGC
TAACTGCAGTGTCAGCTATCCTGTGGTATATCAATCTGGGAAAGGATGGA
GTGCCGGCTCAACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTACTT
ATGAGTGCGGCTTGTGCGCCTTTTGTCAATAAACACTACCTATCTCTTTA
TGCTAAGTACGGAGGAAAGCCCCCAGCTGAAGCTCGATTGATTCCGATGA
TGGCTTCTTGTTGGTTTATACCCATCGGTCTGTTCATTTTCGCTTGGACC
TCATATCCCACTATCCATTGGATTGGACCTGCAATTGGAGGTTGGCCTGT
TGGATTTGGCTTCATCTTCTTGTATAATTCGGCCAACAATTATCTGGGTA
TGTTCATCCTTATAGGTCATTGGGCGTTTCCGCTGACATTGTTCTAGTGG
ATACGTATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTT
CGTTCAATGTGGGGTGCATCTACTGTACTCTTTACTGAGCAGATGTACGA
TCGCCTTGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAG
CTTGCTGTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATTCGA
CGATTTTCGCGTTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAG
CTAAGCATTTGTACAGATGACCGTATGAAGATATTGATCATCTGGAACTT
TTTAACCCCAACAAGCTATCTCTTATCAAACACTCCTAATCTCCGCTCTT
GAACCCTGCCAAATGCTGGAAAGACTGATGCGTTATTGATACCAAAGATT
TATA back to topCoding sequence (CDS) from alignment at ch4:3721971..3723974- >KJC3_005785-T1 ID=KJC3_005785-T1|Name=KJC3_005785-T1|organism=Aspergillus niger KJC3|type=CDS|length=6564bp|location=Sequence derived from alignment at ch4:3721971..3723974- (Aspergillus niger KJC3)
TGGATACGTATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTC
CTTCGTTCAATGTGGGGTGCATCTACTGTACTCTTTACTGAGCAGATGTA
CGATCGCCTTGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCC
TAGCTTGCTGTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATT
CGACGATTTTCGCGTTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAA
GAGCTAACTATCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGGC
TCAACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTGC
GGCTTGTGCGCCTTTTGTCAATAAACACTACCTATCTCTTTATGCTAAGT
ACGGAGGAAAGCCCCCAGCTGAAGCTCGATTGATTCCGATGATGGCTTCT
TGTTGGTTTATACCCATCGGTCTGTTCATTTTCGCTTGGACCTCATATCC
CACTATCCATTGGATTGGACCTGCAATTGGAGGTTGGCCTGTTGGATTTG
GCTTCATCTTCTTGTATAATTCGGCCAACAATTATCTGGGTCCCATGGCT
TTTGCTCCCCTGTCTGAAATGGTGGGCCGGCGGATTATATACGCATCCAC
ACTTTTCTTAGCTGTCATATTCATTATTCCCTGCGCCGTCGCTCCAAATA
TTGGAACCCTCATCGTCTGCAGAGCCATTGATGGGATCGCGTTCAGTGCT
CCAATGACGCTAGTGGGTGGTACTTTGGCGGATCTTTGGAAGAATGAAGA
ACGAGGCGTTCCAATGGCAGCATTCTCAGCCAGCCCATTTATTGGGCCTG
CTATTGGACCACTAGCTGGTGGATTTCTTGCAGATGCTACCAACTGGAAA
TGGCTTTACTGGTTGCAGTTGATCCTTGCATTTGTTGCTTGGGTGCTGAT
CACTTTCACGGTTCCGGAGACATATGCGCCAACTCTCCTTAAGAGGAGAG
CGAAGAAACTGAGAAAGCAAGAAGACGACCCTAGCTACGTAACAGAGACG
GAACTAGATTCTCGACCTATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCG
CCCGTTCCAGCTTTTGTTTCTGGAACCGATTGTTCTGTTCATCGCGCTTT
ACATGTCGGTTCTATACGGTTTACTATACATGTTCTTCGTTGCATGACGA
CCGCTCAAGATATGGAGGAAACATACCGCTCCAACTATCCAAGCAACCAT
GTCTCCCGAGTCCTTACAGCCGATCCTACTCAAGGTCAGGTTGATCCTTT
GGATCTTCCTTACCGTCAGGTGACCGAGAACGCCAACATGGAGGAATACA
CGACGGAAACCACCACAGGAGAGATCATCAAGCCAGTCCGGTCCGCTGCT
ACAGGGAAAACAGAAGACTGGAAGCTGGTAACCTTCAGTATCGACGATCC
CGAAAATCCGAAGAATTGGTCCAAAGCCTTCAAATGGTATTGTACCATGG
TGGTTTCGTTCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGTCATCACA
GCCGATATTGAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAGAAGTTAG
CCTTGTTGTTGTTACTGTTTTTGTCATCGGCTTTGGTGTTGTGGATACGT
ATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTTCGTTCA
ATGTGGGGTGCATCTACTGTACTCTTTACTGAGCAGATGTACGATCGCCT
TGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAGCTTGCT
GTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATTCGACGATTT
TCGCGTTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAGCTAACT
ATCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGGCTCAACTGGC
CTAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTGCGGCTTGTGC
GCCTTTTGTCAATAAACACTACCTATCTCTTTATGCTAAGTACGGAGGAA
AGCCCCCAGCTGAAGCTCGATTGATTCCGATGATGGCTTCTTGTTGGTTT
ATACCCATCGGTCTGTTCATTTTCGCTTGGACCTCATATCCCACTATCCA
TTGGATTGGACCTGCAATTGGAGGTTGGCCTGTTGGATTTGGCTTCATCT
TCTTGTATAATTCGGCCAACAATTATCTGGGTCCCATGGCTTTTGCTCCC
CTGTCTGAAATGGTGGGCCGGCGGATTATATACGCATCCACACTTTTCTT
AGCTGTCATATTCATTATTCCCTGCGCCGTCGCTCCAAATATTGGAACCC
TCATCGTCTGCAGAGCCATTGATGGGATCGCGTTCAGTGCTCCAATGACG
CTAGTGGGTGGTACTTTGGCGGATCTTTGGAAGAATGAAGAACGAGGCGT
TCCAATGGCAGCATTCTCAGCCAGCCCATTTATTGGGCCTGCTATTGGAC
CACTAGCTGGTGGATTTCTTGCAGATGCTACCAACTGGAAATGGCTTTAC
TGGTTGCAGTTGATCCTTGCATTTGTTGCTTGGGTGCTGATCACTTTCAC
GGTTCCGGAGACATATGCGCCAACTCTCCTTAAGAGGAGAGCGAAGAAAC
TGAGAAAGCAAGAAGACGACCCTAGCTACGTAACAGAGACGGAACTAGAT
TCTCGACCTATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCGCCCGTTCCA
GCTTTTGTTTCTGGAACCGATTGTTCTGTTCATCGCGCTTTACATGTCGG
TTCTATACGGTTTACTATACATGTTCTTCGTTGCATGACGACCGCTCAAG
ATATGGAGGAAACATACCGCTCCAACTATCCAAGCAACCATGTCTCCCGA
GTCCTTACAGCCGATCCTACTCAAGGTCAGGTTGATCCTTTGGATCTTCC
TTACCGTCAGGTGACCGAGAACGCCAACATGGAGGAATACACGACGGAAA
CCACCACAGGAGAGATCATCAAGCCAGTCCGGTCCGCTGCTACAGGGAAA
ACAGAAGACTGGAAGCTGGTAACCTTCAGTATCGACGATCCCGAAAATCC
GAAGAATTGGTCCAAAGCCTTCAAATGGTATTGTACCATGGTGGTTTCGT
TCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGTCATCACAGCCGATATT
GAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAGAAGTTAGCCTTGTTGT
TGTTACTGTTTTTGTCATCGGCTTTGGTGTTGTGGATACGTATCAGCATC
AAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTTCGTTCAATGTGGGGT
GCATCTACTGTACTCTTTACTGAGCAGATGTACGATCGCCTTGGGTACCA
ATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAGCTTGCTGTGCGATCC
CGTATGTCTTCTACTTCAAGGGGGCATCCATTCGACGATTTTCGCGTTAT
GCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAGCTAACTATCCTGTGG
TATATCAATCTGGGAAAGGATGGAGTGCCGGCTCAACTGGCCTAATGTTC
ATCCCACTCGCCATTGGCGTACTTATGAGTGCGGCTTGTGCGCCTTTTGT
CAATAAACACTACCTATCTCTTTATGCTAAGTACGGAGGAAAGCCCCCAG
CTGAAGCTCGATTGATTCCGATGATGGCTTCTTGTTGGTTTATACCCATC
GGTCTGTTCATTTTCGCTTGGACCTCATATCCCACTATCCATTGGATTGG
ACCTGCAATTGGAGGTTGGCCTGTTGGATTTGGCTTCATCTTCTTGTATA
ATTCGGCCAACAATTATCTGGGTCCCATGGCTTTTGCTCCCCTGTCTGAA
ATGGTGGGCCGGCGGATTATATACGCATCCACACTTTTCTTAGCTGTCAT
ATTCATTATTCCCTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCT
GCAGAGCCATTGATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGT
GGTACTTTGGCGGATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGC
AGCATTCTCAGCCAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTG
GTGGATTTCTTGCAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAG
TTGATCCTTGCATTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGA
GACATATGCGCCAACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGC
AAGAAGACGACCCTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCT
ATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTT
TCTGGAACCGATTGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACG
GTTTACTATACATGTTCTTCGTTGCATGACGACCGCTCAAGATATGGAGG
AAACATACCGCTCCAACTATCCAAGCAACCATGTCTCCCGAGTCCTTACA
GCCGATCCTACTCAAGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCA
GGTGACCGAGAACGCCAACATGGAGGAATACACGACGGAAACCACCACAG
GAGAGATCATCAAGCCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGAC
TGGAAGCTGGTAACCTTCAGTATCGACGATCCCGAAAATCCGAAGAATTG
GTCCAAAGCCTTCAAATGGTATTGTACCATGGTGGTTTCGTTCACATGCT
TTGTCGTCGCTTTTGCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCT
GCAGAACAGTTCGGCGTTTCTCGAGAAGTTAGCCTTGTTGTTGTTACTGT
TTTTGTCATCGGCTTTGGTGTTGTGGATACGTATCAGCATCAAGCCGCTT
CTGCACTTGCCGCAAAGACATTCCTTCGTTCAATGTGGGGTGCATCTACT
GTACTCTTTACTGAGCAGATGTACGATCGCCTTGGGTACCAATGGGCAAG
CTCGTTGCTCGCTTTCATTGCCCTAGCTTGCTGTGCGATCCCGTATGTCT
TCTACTTCAAGGGGGCATCCATTCGACGATTTTCGCGTTATGCCTTCAGC
GACGACGAAGAGAATGGTGAGAAGAGCTAACTATCCTGTGGTATATCAAT
CTGGGAAAGGATGGAGTGCCGGCTCAACTGGCCTAATGTTCATCCCACTC
GCCATTGGCGTACTTATGAGTGCGGCTTGTGCGCCTTTTGTCAATAAACA
CTACCTATCTCTTTATGCTAAGTACGGAGGAAAGCCCCCAGCTGAAGCTC
GATTGATTCCGATGATGGCTTCTTGTTGGTTTATACCCATCGGTCTGTTC
ATTTTCGCTTGGACCTCATATCCCACTATCCATTGGATTGGACCTGCAAT
TGGAGGTTGGCCTGTTGGATTTGGCTTCATCTTCTTGTATAATTCGGCCA
ACAATTATCTGGGTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGC
CGGCGGATTATATACGCATCCACACTTTTCTTAGCTGTCATATTCATTAT
TCCCTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCA
TTGATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTG
GCGGATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTC
AGCCAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTC
TTGCAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTT
GCATTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGAGACATATGC
GCCAACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACG
ACCCTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCTATGGGGGAG
AAGTTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACC
GATTGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACGGTTTACTAT
ACATGTTCTTCGTTGCATGACGACCGCTCAAGATATGGAGGAAACATACC
GCTCCAACTATCCAAGCAACCATGTCTCCCGAGTCCTTACAGCCGATCCT
ACTCAAGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCAGGTGACCGA
GAACGCCAACATGGAGGAATACACGACGGAAACCACCACAGGAGAGATCA
TCAAGCCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGACTGGAAGCTG
GTAACCTTCAGTATCGACGATCCCGAAAATCCGAAGAATTGGTCCAAAGC
CTTCAAATGGTATTGTACCATGGTGGTTTCGTTCACATGCTTTGTCGTCG
CTTTTGCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCTGCAGAACAG
TTCGGCGTTTCTCGAGAAGTTAGCCTTGTTGTTGTTACTGTTTTTGTCAT
CGGCTTTGGTGTTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005785-T1.utr3p1 | KJC3_005785-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005785-T1.utr5p1 | KJC3_005785-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3721971..3723974 - |
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