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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3721971..3723974- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005785-T2 ID=KJC3_005785-T2|Name=KJC3_005785-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2004bp|location=Sequence derived from alignment at ch4:3721971..3723974- (Aspergillus niger KJC3)
AGGGTTTTCATGCGCTACTTAAACGATAGTAATCATTGCACGGGTGTCTG
CCTTCCAATGCATGACGACCGCTCAAGATATGGAGGAAACATACCGCTCC
AACTATCCAAGCAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACTCA
AGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAACG
CCAACATGGAGGAATACACGACGGAAACCACCACAGGAGAGATCATCAAG
CCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTAAC
CTTCAGTATCGACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTTCA
AATGGTATTGTACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTTTT
GCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTCGG
CGTTTCTCGAGAAGTTAGCCTTGTTGTTGTTACTGTTTTTGTCATCGGCT
TTGGTGTTGGTAAGTCATCTTAGTAATTTTGCTTCGATATGGTCACTGAC
TGCGCTCAGGTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCCGG
CGGATTATATACGCATCCACACTTTTCTTAGCTGTCATATTCATTATTCC
CTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCATTG
ATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGGCG
GATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCAGC
CAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCTTG
CAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTGCA
TTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGAGACATATGCGCC
AACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGACC
CTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGAAG
TTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCGAT
TGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACGGTTTACTATACA
TGTTCTTCGTTGCGTAAGTGGTGTGCTATCTGATACTATTACTATCTTGC
TAACTGCAGTGTCAGCTATCCTGTGGTATATCAATCTGGGAAAGGATGGA
GTGCCGGCTCAACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTACTT
ATGAGTGCGGCTTGTGCGCCTTTTGTCAATAAACACTACCTATCTCTTTA
TGCTAAGTACGGAGGAAAGCCCCCAGCTGAAGCTCGATTGATTCCGATGA
TGGCTTCTTGTTGGTTTATACCCATCGGTCTGTTCATTTTCGCTTGGACC
TCATATCCCACTATCCATTGGATTGGACCTGCAATTGGAGGTTGGCCTGT
TGGATTTGGCTTCATCTTCTTGTATAATTCGGCCAACAATTATCTGGGTA
TGTTCATCCTTATAGGTCATTGGGCGTTTCCGCTGACATTGTTCTAGTGG
ATACGTATCAGCATCAAGCCGCTTCTGCACTTGCCGCAAAGACATTCCTT
CGTTCAATGTGGGGTGCATCTACTGTACTCTTTACTGAGCAGATGTACGA
TCGCCTTGGGTACCAATGGGCAAGCTCGTTGCTCGCTTTCATTGCCCTAG
CTTGCTGTGCGATCCCGTATGTCTTCTACTTCAAGGGGGCATCCATTCGA
CGATTTTCGCGTTATGCCTTCAGCGACGACGAAGAGAATGGTGAGAAGAG
CTAAGCATTTGTACAGATGACCGTATGAAGATATTGATCATCTGGAACTT
TTTAACCCCAACAAGCTATCTCTTATCAAACACTCCTAATCTCCGCTCTT
GAACCCTGCCAAATGCTGGAAAGACTGATGCGTTATTGATACCAAAGATT
TATA back to topCoding sequence (CDS) from alignment at ch4:3721971..3723974- >KJC3_005785-T2 ID=KJC3_005785-T2|Name=KJC3_005785-T2|organism=Aspergillus niger KJC3|type=CDS|length=4302bp|location=Sequence derived from alignment at ch4:3721971..3723974- (Aspergillus niger KJC3)
CTATCCTGTGGTATATCAATCTGGGAAAGGATGGAGTGCCGGCTCAACTG
GCCTAATGTTCATCCCACTCGCCATTGGCGTACTTATGAGTGCGGCTTGT
GCGCCTTTTGTCAATAAACACTACCTATCTCTTTATGCTAAGTACGGAGG
AAAGCCCCCAGCTGAAGCTCGATTGATTCCGATGATGGCTTCTTGTTGGT
TTATACCCATCGGTCTGTTCATTTTCGCTTGGACCTCATATCCCACTATC
CATTGGATTGGACCTGCAATTGGAGGTTGGCCTGTTGGATTTGGCTTCAT
CTTCTTGTATAATTCGGCCAACAATTATCTGGGTATGTTCATCCTTATAG
GTCATTGGGCGTTTCCGCTGACATTGTTCTAGGTCCCATGGCTTTTGCTC
CCCTGTCTGAAATGGTGGGCCGGCGGATTATATACGCATCCACACTTTTC
TTAGCTGTCATATTCATTATTCCCTGCGCCGTCGCTCCAAATATTGGAAC
CCTCATCGTCTGCAGAGCCATTGATGGGATCGCGTTCAGTGCTCCAATGA
CGCTAGTGGGTGGTACTTTGGCGGATCTTTGGAAGAATGAAGAACGAGGC
GTTCCAATGGCAGCATTCTCAGCCAGCCCATTTATTGGGCCTGCTATTGG
ACCACTAGCTGGTGGATTTCTTGCAGATGCTACCAACTGGAAATGGCTTT
ACTGGTTGCAGTTGATCCTTGCATTTGTTGCTTGGGTGCTGATCACTTTC
ACGGTTCCGGAGACATATGCGCCAACTCTCCTTAAGAGGAGAGCGAAGAA
ACTGAGAAAGCAAGAAGACGACCCTAGCTACGTAACAGAGACGGAACTAG
ATTCTCGACCTATGGGGGAGAAGTTGCGAGTTTTCCTCTTCCGCCCGTTC
CAGCTTTTGTTTCTGGAACCGATTGTTCTGTTCATCGCGCTTTACATGTC
GGTTCTATACGGTTTACTATACATGTTCTTCGTTGCATGACGACCGCTCA
AGATATGGAGGAAACATACCGCTCCAACTATCCAAGCAACCATGTCTCCC
GAGTCCTTACAGCCGATCCTACTCAAGGTCAGGTTGATCCTTTGGATCTT
CCTTACCGTCAGGTGACCGAGAACGCCAACATGGAGGAATACACGACGGA
AACCACCACAGGAGAGATCATCAAGCCAGTCCGGTCCGCTGCTACAGGGA
AAACAGAAGACTGGAAGCTGGTAACCTTCAGTATCGACGATCCCGAAAAT
CCGAAGAATTGGTCCAAAGCCTTCAAATGGTATTGTACCATGGTGGTTTC
GTTCACATGCTTTGTCGTCGCTTTTGCTAGTAGCGTCATCACAGCCGATA
TTGAAGGCCCTGCAGAACAGTTCGGCGTTTCTCGAGAAGTTAGCCTTGTT
GTTGTTACTGTTTTTGTCATCGGCTTTGGTGTTGCTATCCTGTGGTATAT
CAATCTGGGAAAGGATGGAGTGCCGGCTCAACTGGCCTAATGTTCATCCC
ACTCGCCATTGGCGTACTTATGAGTGCGGCTTGTGCGCCTTTTGTCAATA
AACACTACCTATCTCTTTATGCTAAGTACGGAGGAAAGCCCCCAGCTGAA
GCTCGATTGATTCCGATGATGGCTTCTTGTTGGTTTATACCCATCGGTCT
GTTCATTTTCGCTTGGACCTCATATCCCACTATCCATTGGATTGGACCTG
CAATTGGAGGTTGGCCTGTTGGATTTGGCTTCATCTTCTTGTATAATTCG
GCCAACAATTATCTGGGTATGTTCATCCTTATAGGTCATTGGGCGTTTCC
GCTGACATTGTTCTAGGTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGT
GGGCCGGCGGATTATATACGCATCCACACTTTTCTTAGCTGTCATATTCA
TTATTCCCTGCGCCGTCGCTCCAAATATTGGAACCCTCATCGTCTGCAGA
GCCATTGATGGGATCGCGTTCAGTGCTCCAATGACGCTAGTGGGTGGTAC
TTTGGCGGATCTTTGGAAGAATGAAGAACGAGGCGTTCCAATGGCAGCAT
TCTCAGCCAGCCCATTTATTGGGCCTGCTATTGGACCACTAGCTGGTGGA
TTTCTTGCAGATGCTACCAACTGGAAATGGCTTTACTGGTTGCAGTTGAT
CCTTGCATTTGTTGCTTGGGTGCTGATCACTTTCACGGTTCCGGAGACAT
ATGCGCCAACTCTCCTTAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAA
GACGACCCTAGCTACGTAACAGAGACGGAACTAGATTCTCGACCTATGGG
GGAGAAGTTGCGAGTTTTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGG
AACCGATTGTTCTGTTCATCGCGCTTTACATGTCGGTTCTATACGGTTTA
CTATACATGTTCTTCGTTGCATGACGACCGCTCAAGATATGGAGGAAACA
TACCGCTCCAACTATCCAAGCAACCATGTCTCCCGAGTCCTTACAGCCGA
TCCTACTCAAGGTCAGGTTGATCCTTTGGATCTTCCTTACCGTCAGGTGA
CCGAGAACGCCAACATGGAGGAATACACGACGGAAACCACCACAGGAGAG
ATCATCAAGCCAGTCCGGTCCGCTGCTACAGGGAAAACAGAAGACTGGAA
GCTGGTAACCTTCAGTATCGACGATCCCGAAAATCCGAAGAATTGGTCCA
AAGCCTTCAAATGGTATTGTACCATGGTGGTTTCGTTCACATGCTTTGTC
GTCGCTTTTGCTAGTAGCGTCATCACAGCCGATATTGAAGGCCCTGCAGA
ACAGTTCGGCGTTTCTCGAGAAGTTAGCCTTGTTGTTGTTACTGTTTTTG
TCATCGGCTTTGGTGTTGCTATCCTGTGGTATATCAATCTGGGAAAGGAT
GGAGTGCCGGCTCAACTGGCCTAATGTTCATCCCACTCGCCATTGGCGTA
CTTATGAGTGCGGCTTGTGCGCCTTTTGTCAATAAACACTACCTATCTCT
TTATGCTAAGTACGGAGGAAAGCCCCCAGCTGAAGCTCGATTGATTCCGA
TGATGGCTTCTTGTTGGTTTATACCCATCGGTCTGTTCATTTTCGCTTGG
ACCTCATATCCCACTATCCATTGGATTGGACCTGCAATTGGAGGTTGGCC
TGTTGGATTTGGCTTCATCTTCTTGTATAATTCGGCCAACAATTATCTGG
GTATGTTCATCCTTATAGGTCATTGGGCGTTTCCGCTGACATTGTTCTAG
GTCCCATGGCTTTTGCTCCCCTGTCTGAAATGGTGGGCCGGCGGATTATA
TACGCATCCACACTTTTCTTAGCTGTCATATTCATTATTCCCTGCGCCGT
CGCTCCAAATATTGGAACCCTCATCGTCTGCAGAGCCATTGATGGGATCG
CGTTCAGTGCTCCAATGACGCTAGTGGGTGGTACTTTGGCGGATCTTTGG
AAGAATGAAGAACGAGGCGTTCCAATGGCAGCATTCTCAGCCAGCCCATT
TATTGGGCCTGCTATTGGACCACTAGCTGGTGGATTTCTTGCAGATGCTA
CCAACTGGAAATGGCTTTACTGGTTGCAGTTGATCCTTGCATTTGTTGCT
TGGGTGCTGATCACTTTCACGGTTCCGGAGACATATGCGCCAACTCTCCT
TAAGAGGAGAGCGAAGAAACTGAGAAAGCAAGAAGACGACCCTAGCTACG
TAACAGAGACGGAACTAGATTCTCGACCTATGGGGGAGAAGTTGCGAGTT
TTCCTCTTCCGCCCGTTCCAGCTTTTGTTTCTGGAACCGATTGTTCTGTT
CATCGCGCTTTACATGTCGGTTCTATACGGTTTACTATACATGTTCTTCG
TTGCATGACGACCGCTCAAGATATGGAGGAAACATACCGCTCCAACTATC
CAAGCAACCATGTCTCCCGAGTCCTTACAGCCGATCCTACTCAAGGTCAG
GTTGATCCTTTGGATCTTCCTTACCGTCAGGTGACCGAGAACGCCAACAT
GGAGGAATACACGACGGAAACCACCACAGGAGAGATCATCAAGCCAGTCC
GGTCCGCTGCTACAGGGAAAACAGAAGACTGGAAGCTGGTAACCTTCAGT
ATCGACGATCCCGAAAATCCGAAGAATTGGTCCAAAGCCTTCAAATGGTA
TTGTACCATGGTGGTTTCGTTCACATGCTTTGTCGTCGCTTTTGCTAGTA
GCGTCATCACAGCCGATATTGAAGGCCCTGCAGAACAGTTCGGCGTTTCT
CGAGAAGTTAGCCTTGTTGTTGTTACTGTTTTTGTCATCGGCTTTGGTGT
TG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005785-T2.utr3p1 | KJC3_005785-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005785-T2.utr5p1 | KJC3_005785-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR011701 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3721971..3723974 - |
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