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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3749093..3751546+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005793-T1 ID=KJC3_005793-T1|Name=KJC3_005793-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2454bp|location=Sequence derived from alignment at ch4:3749093..3751546+ (Aspergillus niger KJC3)
TTGGTGGTGGCGCACGTGTCATGCACATTTGCTTCTTCCCATTCCCTGCA
AATTCCCTAACTATTTTCCTTCCCATTTTTGTTTTAGTATCGAGTTAGTA
AGTACGTAGGTAGTCTGCCTCCTCTCTGTCGCGGTGGATCTGCTCATGGT
CCGTCCACTCCGGAGGTTGTGTGATCGAATGGCATTTCGGTGGCTTCGTT
CAAGACAAACCTCCAGGGTCGGATCCACTCCGTTTCGAGCATGCCATCCC
GTGTGGTCAATATACCCTGTCTGGTCCCTGTCCGGTATATTTGATATCCG
TTCGCCTCCTTGTCGGCTCTTGCTGGCTTCCCCTGGCGGCTTTTTTTCTT
CTTCATCTATTTCTGTTACGCTTCATCTCTCTCCATCTCTCGTCATCTCA
CGTTCTTTCCACTCCTCCTTTCCTCGTTGCTGGTGTTGCATGGGTGACCC
TTGACAACACTAACTGCATTGCATTGCTACCATCCCTCTCACCTCACCTC
ATCCATATCCCCGACCATATAATCTTTCATTATCGGCCTCTGGGGCGTAC
AGACGGTCCCCCTTTTTCTAAATTAATTCCTTTTTTTCATCTTTCTTTTT
TCCTTTCCTTTTCTTTTTTAAATCATCCTTTTTCCTTCCTTCCAAATTCA
CTCCATCTCTTGTCAATTATCCAACATGTATTCTACAACAGCACCTCTTG
ATTTGGATTATCTCAATGAACAGTTGCTTCCTCGACGCTACGAATCCGAA
GAAGAGGAGACGTCAGAATCAGAATATGGGGCCCATGACCATGCCTTTTC
GCCTATCAAGACTGCTGGTCCCTTCGACTCGGATACCAGTGCAGATGAGC
TTTCCAATGTGAATTCCCCAGAGTCGCCAGTGGACAAGTCGTCATTTGCC
CGCCTCCTGTCAGCCTATCCATCCGGCAAACAAAGTCGACCCGTATCCAT
GGATACGGTGAAACGAAGCAGTGGAACGACGTTTGTACCAGATTCGTACA
TCTTTGACGACGAAGACGACGTGATAATTGAGCTGCCCTCCCCTAGTGCT
ACCTCTCCTTTGCAATCTCCCATCTTCCTTCAGCCAACAGTCTACCAACC
TCCCGCGTCTCCCCCGTCGCAACAGTCACGATCTCCGTCTCCGGCTCTAA
GCGAGTCGGATGAAGAGACAGACGTGCTCGTAGCAGAGCAGGTCAAATTC
GTGGAACCCTGCGCCAAACCTAATCTAATCCTAATTAGTCCCGTCACCGA
CGGATCAGTGGTCGAAGAACCTGAACCCATGTCGGCAGTTTCTGCGGTTT
CTGCAGATGTACCCGATCGCTTTCCATCCGGCCAAGGAATCTACTCCTTG
AACCAGGGAACCAAATCCCAGCCCTTGTTGAGCGACAAGCGGCCCGATTA
CCTGGCGCACATGAAGCGCGGCAGCTTGCAGCTGCACGGCAAATATGCGA
AACAAGCGCCCAAACGGGCCGATACGGACCCCTTCACAATGCCGCGAGCT
CTTGCGGACGTTCCTGAAACAGCCCAGGCGATGGCCATGCGCTCGCGTGC
TATGACATGGAATCGACCACAGACGTCCGCCGACAGTGCATCGAACCGCG
GTCCCAAAGCGGGTCTCCTCCGCCGTCCGCCATCTATGCAAAGTGTTGGT
GGTGCTGGTGGTGGTTACTCTCTGTTCCCGAGCACCAGACGAACCCCTGC
ATATCCTGGCGATGAGTTCCACGCTCGGTCCACCTCTGTGTCCCACTCGA
TCGCCAGTTCGGACATGAGCCAGCCACCATCACGCACATCCAGTCCAGCA
CCATACTACTCCTCCCCTACATTCAACCGACACCGCTCGGGTTCATCGTA
CAGTGTATCCAGCGTCCCCGGCAACATCGCACAGCGGCCGCCATTGCGCA
ACTCAATCATGAAGAGCTCAACCGCATCGAGTGTGTACTCGGCCAGCAGT
CTGCGATCGGAAGTGGAGAGCGTGCACAGCCTGGAACCACGGGAGACCGC
CGAGCCCGAAGTTGCCAAGACGGCGCGGCGGAAGAAGAGTTTTCGGCGCA
GCAAACAGCCCAAGCTCGAGAGCACAACAACTGAGCCGCTCCCAACAACC
CCCAAGAGTTTCATGGGGTTCATGTTACGAGGGCGGAGAAAGTCCACCAT
TCAAAAGTCTTAATGCTTAATTTTGTTTGTCATTTTGTTGGAACTAGTGT
TTCATATTCATCTGTTTAACTACCGGTTTGGGGCAAATCGGCTATGATGG
CGTTCGGTTAGCGGGATTAAGGGTTTAGGAATCTGGATCAGGCGGCTACT
TGATTTGAATTGGTTCTTGTTTATTCGCACTGGATGCTACATTCCTGCTA
CTATATTACTCTAGTGTTTGAATTTTTCCTGTACTATAGCAAGGAACAAA
CAGTGGTCTTCCCGGAGCGGGCCCATTCAGAAAATGTTGAACATACTACC
ATCC back to topCoding sequence (CDS) from alignment at ch4:3749093..3751546+ >KJC3_005793-T1 ID=KJC3_005793-T1|Name=KJC3_005793-T1|organism=Aspergillus niger KJC3|type=CDS|length=1488bp|location=Sequence derived from alignment at ch4:3749093..3751546+ (Aspergillus niger KJC3)
ATGTATTCTACAACAGCACCTCTTGATTTGGATTATCTCAATGAACAGTT
GCTTCCTCGACGCTACGAATCCGAAGAAGAGGAGACGTCAGAATCAGAAT
ATGGGGCCCATGACCATGCCTTTTCGCCTATCAAGACTGCTGGTCCCTTC
GACTCGGATACCAGTGCAGATGAGCTTTCCAATGTGAATTCCCCAGAGTC
GCCAGTGGACAAGTCGTCATTTGCCCGCCTCCTGTCAGCCTATCCATCCG
GCAAACAAAGTCGACCCGTATCCATGGATACGGTGAAACGAAGCAGTGGA
ACGACGTTTGTACCAGATTCGTACATCTTTGACGACGAAGACGACGTGAT
AATTGAGCTGCCCTCCCCTAGTGCTACCTCTCCTTTGCAATCTCCCATCT
TCCTTCAGCCAACAGTCTACCAACCTCCCGCGTCTCCCCCGTCGCAACAG
TCACGATCTCCGTCTCCGGCTCTAAGCGAGTCGGATGAAGAGACAGACGT
GCTCGTAGCAGAGCAGGTCAAATTCGTGGAACCCTGCGCCAAACCTAATC
TAATCCTAATTAGTCCCGTCACCGACGGATCAGTGGTCGAAGAACCTGAA
CCCATGTCGGCAGTTTCTGCGGTTTCTGCAGATGTACCCGATCGCTTTCC
ATCCGGCCAAGGAATCTACTCCTTGAACCAGGGAACCAAATCCCAGCCCT
TGTTGAGCGACAAGCGGCCCGATTACCTGGCGCACATGAAGCGCGGCAGC
TTGCAGCTGCACGGCAAATATGCGAAACAAGCGCCCAAACGGGCCGATAC
GGACCCCTTCACAATGCCGCGAGCTCTTGCGGACGTTCCTGAAACAGCCC
AGGCGATGGCCATGCGCTCGCGTGCTATGACATGGAATCGACCACAGACG
TCCGCCGACAGTGCATCGAACCGCGGTCCCAAAGCGGGTCTCCTCCGCCG
TCCGCCATCTATGCAAAGTGTTGGTGGTGCTGGTGGTGGTTACTCTCTGT
TCCCGAGCACCAGACGAACCCCTGCATATCCTGGCGATGAGTTCCACGCT
CGGTCCACCTCTGTGTCCCACTCGATCGCCAGTTCGGACATGAGCCAGCC
ACCATCACGCACATCCAGTCCAGCACCATACTACTCCTCCCCTACATTCA
ACCGACACCGCTCGGGTTCATCGTACAGTGTATCCAGCGTCCCCGGCAAC
ATCGCACAGCGGCCGCCATTGCGCAACTCAATCATGAAGAGCTCAACCGC
ATCGAGTGTGTACTCGGCCAGCAGTCTGCGATCGGAAGTGGAGAGCGTGC
ACAGCCTGGAACCACGGGAGACCGCCGAGCCCGAAGTTGCCAAGACGGCG
CGGCGGAAGAAGAGTTTTCGGCGCAGCAAACAGCCCAAGCTCGAGAGCAC
AACAACTGAGCCGCTCCCAACAACCCCCAAGAGTTTCATGGGGTTCATGT
TACGAGGGCGGAGAAAGTCCACCATTCAAAAGTCTTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005793-T1.utr5p1 | KJC3_005793-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005793-T1.utr3p1 | KJC3_005793-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3749093..3751546 + |
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