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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3770840..3773380- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005800-T1 ID=KJC3_005800-T1|Name=KJC3_005800-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2541bp|location=Sequence derived from alignment at ch4:3770840..3773380- (Aspergillus niger KJC3)
AGCGCATCCAAATCCACTTTACGCGGTCAACGTATCCGGAGCGCGTCTTG
TCCAGCCCTGCCATCCGTCGCGTGTTGAGATAGATGTTGCTGGGCTACGA
CCAACCCGGCTCGCTTTCTACTGAGATTCATGTGATTGACTGAGACAATA
TATAATATCTGAAATTGATGCCTTGCGGTAGCCAAGTTTAGGCTCCTAAG
TCCTAGTGTCAGAGTCGCGACGCCGCTCGGAAACATCCTATTGTTGTACG
GACCTCGCAAAATCAAATCGGCTTACAAGAGGCACATCATGGCGGCCGTG
GACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGTGTGAGTACTCCTTC
ATCTTGCCCTTTCTGGTATTGCAAAGACCTTGTCCTTTGAGGCGTGTTGA
ACAACACCGTGCGCAGGCTTGTGACAGCAATCTAACACTGGTGGCTAGGT
CCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTT
CCGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGAC
AAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCA
TGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGGTGAGATTTATTAGC
ATTCCCAATATTGCATCGCTTTGCCGCGCTACAACTATGTGCAGGGACAT
GGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATC
GACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACC
ACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAA
AGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAA
CCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGA
AATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTG
AGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCTCAAAAT
GGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAAT
CTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGTTGGATT
ATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCA
CAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAA
TACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAG
ATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCTGAACAGGAGGAG
ACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGAC
GTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACT
GGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAA
GGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCT
ACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAG
ATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTT
CGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTAT
AAATAATAAAGGCGAGGCAGCCTCAACTACCGTCCGACGGGTACCACCTA
ATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGAT
CAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCAGCCTCC
CAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGA
TTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGG
AGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGC
ACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTA
GTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTG
GACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAAT
TCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGA
AGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATATCATATG
GCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGA
TCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCC
ATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGAT
CCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGG
GAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCA
CATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGA back to topCoding sequence (CDS) from alignment at ch4:3770840..3773380- >KJC3_005800-T1 ID=KJC3_005800-T1|Name=KJC3_005800-T1|organism=Aspergillus niger KJC3|type=CDS|length=6246bp|location=Sequence derived from alignment at ch4:3770840..3773380- (Aspergillus niger KJC3)
GGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCGCTGAGCGCAACAAC
ATAATCGACAAGCTAAGGCCGATATTCGACTACGTTGCTGGAGATCGCAG
TCCACCACCTGCCCCGAAACATACCACTGCAGCCTCGTCGAAGCCAAGAG
CCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAGAGGTTGTCCCTGCT
GTAAAACCGCACCGAAGTATGGCACCGCCCGCCTATCATCCCTATGAGCC
CTATGAAATGAGCCAAGGATTCGACGAGGATGAATCTTTAGAACAGGCAA
CGCTTGAGTCATCGTCTATGATCGCGGATGATGAGATTATGGCAATGTCT
CAAAATGGTACATACTCACGAAAGCGCAAGCGTGGGATAAACGAGGCCCC
AGCAATCTCAATTAGTGAACAGGAACACATACTCTATGGTGATCAGTTGT
TGGATTATTTCATGACAGTAGGGGATGCACCGGAAGCGACACGCATTCCT
CCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGCGCGATTGACGAATC
TGGAAATACTGCTCTCCATTGGGCATGCGCCATGGGTGACTTGGAGATTG
TGAGAGATCTACTACGGAGAGGGGCAAATATCAAAGCACTATCTGAACAG
GAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACGAACAATTATGAGAA
GAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGACACAGTCTCATTCC
GAGACTGGTTCGGCGCCACTCTATTCCACCACATAGCAGAGACTACTCGG
AGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGCGAAGTATTGCTAGA
CAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGATTTATTGCTGTCTT
GTCAAGATCAGAATGGGGACACTGCTGCTCTGATTGCTGCTCGAAATGGC
GCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGTCCGCGATCTGGTGA
GCTTATAAATAATAAAGGCGAGGCAGCCTCAACTACCGTCCGACGGGTAC
CACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGTCTATCACGATGGGT
AATGATCAATTAGATCCCGACGTCACAGCACCTGTCACATCAGATCACCA
GCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTACCTCGGCATTAATGT
CTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGAAACTCACCGCAGGC
TACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGACGATGTTGCGAATCC
GGAGGCACTTTATGCGCAACTTGAATCGGATCGGCAAAAGATTCAGAAAC
AGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAGAGTCAATCGACGCG
CAGCTGGACCGCTACGAACAATTAAGACATAGCTACGAATCCGTCTTGGA
GCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGCATCAACGCCAGTGC
CCGAGAAGGAAGATACGGGATCTGACCAGGACCAACAACTTCGCACATAT
CATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGT
GAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGTAAGCACTAAATTCG
ATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCCTCAAAGAGGAAGAT
CTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTAGAATTCGATCGAAT
GAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCCAGAGGCCAGGGAGT
CGGCCACATTCCCCATTCCTGGTCCGACGGTATCCGTGGATGCCTGAGTC
CCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTCATGCGAAGGCGTTC
CGATGACTGGATAAATGCTACACATATTCTGAAAGTTGCCGGGTTTGACA
AGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGCAGAAAGGGGTCCAT
GAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGATGGCGGCCGTGGACT
TCTCCAAAGTTTACTCTGCTACTTATAGCAGTGGACATGGATTCCGCTTC
CTGAGGGCCGCATGCTCGCTGAGCGCAACAACATAATCGACAAGCTAAGG
CCGATATTCGACTACGTTGCTGGAGATCGCAGTCCACCACCTGCCCCGAA
ACATACCACTGCAGCCTCGTCGAAGCCAAGAGCCCCAAAGAATACAAACA
AGAGAGTCGCGAATGAAGAGGTTGTCCCTGCTGTAAAACCGCACCGAAGT
ATGGCACCGCCCGCCTATCATCCCTATGAGCCCTATGAAATGAGCCAAGG
ATTCGACGAGGATGAATCTTTAGAACAGGCAACGCTTGAGTCATCGTCTA
TGATCGCGGATGATGAGATTATGGCAATGTCTCAAAATGGTACATACTCA
CGAAAGCGCAAGCGTGGGATAAACGAGGCCCCAGCAATCTCAATTAGTGA
ACAGGAACACATACTCTATGGTGATCAGTTGTTGGATTATTTCATGACAG
TAGGGGATGCACCGGAAGCGACACGCATTCCTCCCCCACAACCGCCTGCC
AACTTCCAGGTCGATCGCGCGATTGACGAATCTGGAAATACTGCTCTCCA
TTGGGCATGCGCCATGGGTGACTTGGAGATTGTGAGAGATCTACTACGGA
GAGGGGCAAATATCAAAGCACTATCTGAACAGGAGGAGACACCCCTCGTG
CGTGCCGTGCTGTTCACGAACAATTATGAGAAGAGGACGTTTCCACCGCT
ATTAGATCTTCTCTTGGACACAGTCTCATTCCGAGACTGGTTCGGCGCCA
CTCTATTCCACCACATAGCAGAGACTACTCGGAGCAAAGGCAAATGGAAG
AGCTCGCGATATTACTGCGAAGTATTGCTAGACAAGCTACGCGTTACGTT
CTCGGCTGAGGAAGTTGATTTATTGCTGTCTTGTCAAGATCAGAATGGGG
ACACTGCTGCTCTGATTGCTGCTCGAAATGGCGCGTTTCGTTTGGTTGAC
CTACTACTCGCTCGGTGTCCGCGATCTGGTGAGCTTATAAATAATAAAGG
CGAGGCAGCCTCAACTACCGTCCGACGGGTACCACCTAATGAGCGCGACG
TCCCTCTTCCCCCTTCGTCTATCACGATGGGTAATGATCAATTAGATCCC
GACGTCACAGCACCTGTCACATCAGATCACCAGCCTCCCAGCCTTCCGCA
GGATTCCTCCCCTGCTACCTCGGCATTAATGTCTAAGATTGCCGTCATAA
TGGCCGAGGCGAACAGGAAACTCACCGCAGGCTACGGGAGCTCCAAGGCA
AACCAGCAAGATTCAGACGATGTTGCGAATCCGGAGGCACTTTATGCGCA
ACTTGAATCGGATCGGCAAAAGATTCAGAAACAGGTTAGTATGCTGGTGG
CGAAAGAAGCCGAAGAAGAGTCAATCGACGCGCAGCTGGACCGCTACGAA
CAATTAAGACATAGCTACGAATCCGTCTTGGAGCAAATTCACCAGGCTCG
ACTCAGAGAGAGGATCGCATCAACGCCAGTGCCCGAGAAGGAAGATACGG
GATCTGACCAGGACCAACAACTTCGCACATATCATATGGCCCGTCAATTG
TGCTCTGCTCAGAAGGCTCGGCGCGCAGCCGTGAAGGATCTTGTCCAACA
GACGGCCGATGCGGGTGTAAGCACTAAATTCGATGTCCATCGCAAGTTGG
TAGCACTTGCCACCGGCCTCAAAGAGGAAGATCTAGATCCAATGGCCGCA
GAGCTGGCTGAAACACTAGAATTCGATCGAATGAATGGGAAGGCTGCAGG
AGCCGAGTCACCAGAGCCAGAGGCCAGGGAGTCGGCCACATTCCCCATTC
CTGGTCCGACGGTATCCGTGGATGCCTGAGTCCCGGTTTATGAGTTCAAA
ATCGACGGTGACAGTGTCATGCGAAGGCGTTCCGATGACTGGATAAATGC
TACACATATTCTGAAAGTTGCCGGGTTTGACAAGCCTGCGAGGACTCGCA
TCCTGGAACGCGAGGTGCAGAAAGGGGTCCATGAAAAGGTGCAAGGTGGC
TATGGGAAATATCAAGATGGCGGCCGTGGACTTCTCCAAAGTTTACTCTG
CTACTTATAGCAGTGGACATGGATTCCGCTTCCTGAGGGCCGCATGCTCG
CTGAGCGCAACAACATAATCGACAAGCTAAGGCCGATATTCGACTACGTT
GCTGGAGATCGCAGTCCACCACCTGCCCCGAAACATACCACTGCAGCCTC
GTCGAAGCCAAGAGCCCCAAAGAATACAAACAAGAGAGTCGCGAATGAAG
AGGTTGTCCCTGCTGTAAAACCGCACCGAAGTATGGCACCGCCCGCCTAT
CATCCCTATGAGCCCTATGAAATGAGCCAAGGATTCGACGAGGATGAATC
TTTAGAACAGGCAACGCTTGAGTCATCGTCTATGATCGCGGATGATGAGA
TTATGGCAATGTCTCAAAATGGTACATACTCACGAAAGCGCAAGCGTGGG
ATAAACGAGGCCCCAGCAATCTCAATTAGTGAACAGGAACACATACTCTA
TGGTGATCAGTTGTTGGATTATTTCATGACAGTAGGGGATGCACCGGAAG
CGACACGCATTCCTCCCCCACAACCGCCTGCCAACTTCCAGGTCGATCGC
GCGATTGACGAATCTGGAAATACTGCTCTCCATTGGGCATGCGCCATGGG
TGACTTGGAGATTGTGAGAGATCTACTACGGAGAGGGGCAAATATCAAAG
CACTATCTGAACAGGAGGAGACACCCCTCGTGCGTGCCGTGCTGTTCACG
AACAATTATGAGAAGAGGACGTTTCCACCGCTATTAGATCTTCTCTTGGA
CACAGTCTCATTCCGAGACTGGTTCGGCGCCACTCTATTCCACCACATAG
CAGAGACTACTCGGAGCAAAGGCAAATGGAAGAGCTCGCGATATTACTGC
GAAGTATTGCTAGACAAGCTACGCGTTACGTTCTCGGCTGAGGAAGTTGA
TTTATTGCTGTCTTGTCAAGATCAGAATGGGGACACTGCTGCTCTGATTG
CTGCTCGAAATGGCGCGTTTCGTTTGGTTGACCTACTACTCGCTCGGTGT
CCGCGATCTGGTGAGCTTATAAATAATAAAGGCGAGGCAGCCTCAACTAC
CGTCCGACGGGTACCACCTAATGAGCGCGACGTCCCTCTTCCCCCTTCGT
CTATCACGATGGGTAATGATCAATTAGATCCCGACGTCACAGCACCTGTC
ACATCAGATCACCAGCCTCCCAGCCTTCCGCAGGATTCCTCCCCTGCTAC
CTCGGCATTAATGTCTAAGATTGCCGTCATAATGGCCGAGGCGAACAGGA
AACTCACCGCAGGCTACGGGAGCTCCAAGGCAAACCAGCAAGATTCAGAC
GATGTTGCGAATCCGGAGGCACTTTATGCGCAACTTGAATCGGATCGGCA
AAAGATTCAGAAACAGGTTAGTATGCTGGTGGCGAAAGAAGCCGAAGAAG
AGTCAATCGACGCGCAGCTGGACCGCTACGAACAATTAAGACATAGCTAC
GAATCCGTCTTGGAGCAAATTCACCAGGCTCGACTCAGAGAGAGGATCGC
ATCAACGCCAGTGCCCGAGAAGGAAGATACGGGATCTGACCAGGACCAAC
AACTTCGCACATATCATATGGCCCGTCAATTGTGCTCTGCTCAGAAGGCT
CGGCGCGCAGCCGTGAAGGATCTTGTCCAACAGACGGCCGATGCGGGTGT
AAGCACTAAATTCGATGTCCATCGCAAGTTGGTAGCACTTGCCACCGGCC
TCAAAGAGGAAGATCTAGATCCAATGGCCGCAGAGCTGGCTGAAACACTA
GAATTCGATCGAATGAATGGGAAGGCTGCAGGAGCCGAGTCACCAGAGCC
AGAGGCCAGGGAGTCGGCCACATTCCCCATTCCTGGTCCGACGGTATCCG
TGGATGCCTGAGTCCCGGTTTATGAGTTCAAAATCGACGGTGACAGTGTC
ATGCGAAGGCGTTCCGATGACTGGATAAATGCTACACATATTCTGAAAGT
TGCCGGGTTTGACAAGCCTGCGAGGACTCGCATCCTGGAACGCGAGGTGC
AGAAAGGGGTCCATGAAAAGGTGCAAGGTGGCTATGGGAAATATCAAGAT
GGCGGCCGTGGACTTCTCCAAAGTTTACTCTGCTACTTATAGCAGT back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005800-T1.utr5p1 | KJC3_005800-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR003163 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR036887 |
| DBxref | InterPro:IPR002110 |
| DBxref | InterPro:IPR018004 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3770840..3773380 - |
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