|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3832682..3834116+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005815-T1 ID=KJC3_005815-T1|Name=KJC3_005815-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1435bp|location=Sequence derived from alignment at ch4:3832682..3834116+ (Aspergillus niger KJC3)
ATGGCCGAAACCGAGTCCCCACCTGGCCCCAAAGACAAACTAGAGGTTGC
CTTGTTCCTTGCCGCTAGCAAAGGGTATGATACCATTGTCACGCTTCTGT
TAGGCACCCCTGGCGTGACTCTGGACTGCAAGGATGAACTAGGTCGGACG
CCATTCTTCTGGGCCGCCGCCGAGGGCCACGACAAGGTCCTCCAATTGCT
CCTTGGAACCGGTGCTGTGGACCCAAACATCAAAGACGCTAAGCGTGGAC
AGTCGGCAATTTGTGCAGCTGCGGAGGGCGGCCATGAGAGCGTTGTTGCC
CGGTTGCTTGGTGTCGGAGTGGATTGCCATGCTGCGGACTCTCAAGGGAA
GACACCGTTGGCATATGCGGTCGAAAAAGAGAGTGTATCGATCCTGAATA
TACTGCTAAAAGCGGGGGCAGATCCAAATGTGATAGATGAGGGCGGCCTG
ATCCCATTATCGACTGCGGTAGAGAAAGGCAATCCTGATATTGTGGAAAT
GCTTTTGAAGTCCGGGGCTGATCCCAATGCTGTGGCTTCGAATGGGTGTC
CGCCACTATTGTCGGCGGTGCAGGCTGATAATGAAGTCATCGTGCAGTTG
CTTCTGGAAGCGAAAGCGGATCCTAATCTTAAAGACTCGGAAGGGAATGC
GCCACTATTGTGCGCTGTCGAAGCAGGAAATGAAACCATGGTGCAGTTGC
TGCTGAAGGCAGAAGCAGACCCCAATGTGAAGGATGCAGAAGGAAAAGCA
CCGTTGTCATACGCTGTAGAAGTGGGTAACGAAATCATTGTGCAGATGCT
GCTGAAGGCGAAAGCAGATCCCGACGTCAAGAATCCAGAAGGAAGAGCGC
CGTTGTCATGCGCTGTGGAAGGGGGGGACGAGATCATGGTGCAGATGCTG
CTCAGGGCTAACGCTGACCCTGATGTGAAGGACGGGGACGGGAGGCCACC
GTTGCTATGGGCGGTTGACAAAGGATCCGAGGAGGTAGTGCGATTATTGA
TTGCGTCTCGAAGGGTGGACCTCAATGCAGTCGATGATGGTGGCCGTTCT
GCACTGTGGTGGGCTGCAATGTCTGGGCAATTGAATATCGTCCGGCTGCT
AGTTCGGTACGGAGCAGATATGGAGATGCAGCCTTCCTCAGGAGAGAAGT
ACGAGCAATGTGGCACGCCCTTGTACCAGGCTGGCCGTCGGGGCCACTTC
GATGTGGTCAAGTATCTGATAAAGAAGGGGGCAAATATCAATGCTCCGGC
TGGAGAACCAGGTCTGTCGCTACTGATATCGCTGGTGCTCTTTGACCGAA
CTAAGAGGGGCAGACGAATGCTTGAGCTTCTGCTCGATAGAGGCGCGGAC
ATCAACTCACAAGACGGGTCCGGGAAGACAATCCTGGATCTTGCAGCGGC
AGCCGGCGACGTCGAGCTGGCCGAACTCGCATTAG back to topCoding sequence (CDS) from alignment at ch4:3832682..3834116+ >KJC3_005815-T1 ID=KJC3_005815-T1|Name=KJC3_005815-T1|organism=Aspergillus niger KJC3|type=CDS|length=2766bp|location=Sequence derived from alignment at ch4:3832682..3834116+ (Aspergillus niger KJC3)
ATGGCCGAAACCGAGTCCCCACCTGGCCCCAAAGACAAACTAGAGGTTGC
CTTGTTCCTTGCCGCTAGCAAAGGGTATGATACCATTGTCACGCTTCTGT
TAGGCACCCCTGGCGTGACTCTGGACTGCAAGGATGAACTAGGTCGGACG
CCATTCTTCTGGGCCGCCGCCGAGGGCCACGACAAGGTCCTCCAATTGCT
CCTTGGAACCGGTGCTGTGGACCCAAACATCAAAGACGCTAAGCGTGGAC
AGTCGGCAATTTGTGCAGCTGCGGAGGGCGGCCATGAGAGCGTTGTTGCC
CGGTTGCTTGGTGTCGGAGTGGATTGCCATGCTGCGGACTCTCAAGGGAA
GACACCGTTGGCATATGCGGTCGAAAAAGAGAGTGTATCGATCCTGAATA
TACTGCTAAAAGCGGGGGCAGATCCAAATGTGATAGATGAGGGCGGCCTG
ATCCCATTATCGACTGCGGTAGAGAAAGGCAATCCTGATATTGTGGAAAT
GCTTTTGAAGTCCGGGGCTGATCCCAATGCTGTGGCTTCGAATGGGTGTC
CGCCACTATTGTCGGCGGTGCAGGCTGATAATGAAGTCATCGTGCAGTTG
CTTCTGGAAGCGAAAGCGGATCCTAATCTTAAAGACTCGGAAGGGAATGC
GCCACTATTGTGCGCTGTCGAAGCAGGAAATGAAACCATGGTGCAGTTGC
TGCTGAAGGCAGAAGCAGACCCCAATGTGAAGGATGCAGAAGGAAAAGCA
CCGTTGTCATACGCTGTAGAAGTGGGTAACGAAATCATTGTGCAGATGCT
GCTGAAGGCGAAAGCAGATCCCGACGTCAAGAATCCAGAAGGAAGAGCGC
CGTTGTCATGCGCTGTGGAAGGGGGGGACGAGATCATGGTGCAGATGCTG
CTCAGGGCTAACGCTGACCCTGATGTGAAGGACGGGGACGGGAGGCCACC
GTTGCTATGGGCGGTTGACAAAGGATCCGAGGAGGTAGTGCGATTATTGA
TTGCGTCTCGAAGGGTGGACCTCAATGCAGTCGATGATGGTGGCCGTTCT
GCACTGTGGTGGGCTGCAATGTCTGGGCAATTGAATATCGTCCGGCTGCT
AGTTCGGTACGGAGCAGATATGGAGATGCAGCCTTCCTCAGGAGAGAAGT
ACGAGCAATGTGGCACGCCCTTGTACCAGGCTGGCCGTCGGGGCCACTTC
GATGTGGTCAAGTATCTGATAAAGAAGGGGGCAAATATCAATGCTCCGGC
TGGAGAACCAGACGAATGCTTGAGCTTCTGCTCGATAGAGGCGCGGACAT
CAACTCACAAGACGGGTCCGGGAAGACAATCCTGGATCTTGCAGCGGCAG
CCGGCGACGTCGAGCTGGCCGAACTCGCATTAGATGGCCGAAACCGAGTC
CCCACCTGGCCCCAAAGACAAACTAGAGGTTGCCTTGTTCCTTGCCGCTA
GCAAAGGGTATGATACCATTGTCACGCTTCTGTTAGGCACCCCTGGCGTG
ACTCTGGACTGCAAGGATGAACTAGGTCGGACGCCATTCTTCTGGGCCGC
CGCCGAGGGCCACGACAAGGTCCTCCAATTGCTCCTTGGAACCGGTGCTG
TGGACCCAAACATCAAAGACGCTAAGCGTGGACAGTCGGCAATTTGTGCA
GCTGCGGAGGGCGGCCATGAGAGCGTTGTTGCCCGGTTGCTTGGTGTCGG
AGTGGATTGCCATGCTGCGGACTCTCAAGGGAAGACACCGTTGGCATATG
CGGTCGAAAAAGAGAGTGTATCGATCCTGAATATACTGCTAAAAGCGGGG
GCAGATCCAAATGTGATAGATGAGGGCGGCCTGATCCCATTATCGACTGC
GGTAGAGAAAGGCAATCCTGATATTGTGGAAATGCTTTTGAAGTCCGGGG
CTGATCCCAATGCTGTGGCTTCGAATGGGTGTCCGCCACTATTGTCGGCG
GTGCAGGCTGATAATGAAGTCATCGTGCAGTTGCTTCTGGAAGCGAAAGC
GGATCCTAATCTTAAAGACTCGGAAGGGAATGCGCCACTATTGTGCGCTG
TCGAAGCAGGAAATGAAACCATGGTGCAGTTGCTGCTGAAGGCAGAAGCA
GACCCCAATGTGAAGGATGCAGAAGGAAAAGCACCGTTGTCATACGCTGT
AGAAGTGGGTAACGAAATCATTGTGCAGATGCTGCTGAAGGCGAAAGCAG
ATCCCGACGTCAAGAATCCAGAAGGAAGAGCGCCGTTGTCATGCGCTGTG
GAAGGGGGGGACGAGATCATGGTGCAGATGCTGCTCAGGGCTAACGCTGA
CCCTGATGTGAAGGACGGGGACGGGAGGCCACCGTTGCTATGGGCGGTTG
ACAAAGGATCCGAGGAGGTAGTGCGATTATTGATTGCGTCTCGAAGGGTG
GACCTCAATGCAGTCGATGATGGTGGCCGTTCTGCACTGTGGTGGGCTGC
AATGTCTGGGCAATTGAATATCGTCCGGCTGCTAGTTCGGTACGGAGCAG
ATATGGAGATGCAGCCTTCCTCAGGAGAGAAGTACGAGCAATGTGGCACG
CCCTTGTACCAGGCTGGCCGTCGGGGCCACTTCGATGTGGTCAAGTATCT
GATAAAGAAGGGGGCAAATATCAATGCTCCGGCTGGAGAACCAGACGAAT
GCTTGAGCTTCTGCTCGATAGAGGCGCGGACATCAACTCACAAGACGGGT
CCGGGAAGACAATCCTGGATCTTGCAGCGGCAGCCGGCGACGTCGAGCTG
GCCGAACTCGCATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.8 |
| DBxref | InterPro:IPR036770 |
| DBxref | InterPro:IPR020683 |
| DBxref | InterPro:IPR002110 |
| DBxref | PFAM:PF13857 |
| DBxref | PFAM:PF13637 |
| DBxref | PFAM:PF13606 |
| DBxref | PFAM:PF12796 |
| DBxref | PFAM:PF00023 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:3832682..3834116 + |
|
