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KJC3_005836-T1, KJC3_005836-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005836-T1
Unique NameKJC3_005836-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3885690..3887516-

Legend: CDSpolypeptideexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005836-T1 ID=KJC3_005836-T1|Name=KJC3_005836-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1827bp|location=Sequence derived from alignment at ch4:3885690..3887516- (Aspergillus niger KJC3)
ATGTCCGGGAACACAGCGGAGGGCCAACAAGTCCCTACCCACGAAACCGA
CTATTCAACATGGACTACGTCGAGACTTGTTGCCCGAATCACTGAACTAG
AACGCCAGTTACATTCCCGCACAGCAGAGTACGCTGCATCCCCTGCGAAG
CAGCCCGAGGACGCGGCCAAAGACGCTGCCAAGAGTGCACCGAGTGATGG
GAAAGTGAACCAGAAGGAGCCTTCATCTCCTGCGGTGGGAGCGGAGAAGA
AGAAGCAGGTGAAGCCGCCAAAGCCGCCGAAACCGCGCCGGGAAATTGAT
CCGTCGAGATACAATACACGGTTCATCGCGTTGAAGTTCGCCTACCTTGG
ACAGCGGTACAATGGGCTTGAGCATGCAAACGGGAATGCCACGCCGCTAC
CTACGATCGAGGAGGAGATGTACAAGGCTCTACGGAAGACGCGGTTGATT
TTCCCGACGGATACAACCGGTGATGAATTCGTGGAGAGCTATGCGCCGAG
AGAGACGAAGCCGTATTATATCAATTGGGATGGATGTGAATATTCCAAGG
CTGGGCGTACGGACCGAGGAGTCAGTGCCTTCGGGCAAGTGATTGGCATT
AGAGTGCGGAGTGCACGGCCGAAGCGCGACGAGGTTGTGCAGTCGGACGA
AAACGCCGATACCACCATGCAGAATACGGACGAGGCTAATGCTTCGGTCG
ACGATGGCTGGGACGACATCAAAGATGAGCTACCCTACGTGAGCATGTTG
AACAAGGTGCTTCCTGAGGATATTCGTGTATTGGCATGGTGCCCGCGTCC
TCCTGAGGGGTTCGATGCCCGCTTTTCTTGCGGGGAACGCCATTACAAGT
ATTTCTTCACGCAGCCAGCCTTTTCTCCTACGCCGGGCGCTTCGGGCTTT
GTGCCGCGAGATGGAACAGGCAAGCCTCCGAAGCTGAGAGAGGGTTGGTT
AGACATTGAAGCGATGCGCAAAGCTGCGAAGTATTTCGAAGGGACACACG
ACTTCCGGAACTTCTGTAAATTGGACGTGACGAAACAAATCGAGTCTTTC
TACCGAGACATCTTCCGTGCCGACATTGAGCTTCTCGATGCTCGCACCAA
TCCACTGGGCTATGTGACTCAGCCGGAATTCCAGGCTAGACCGGCCTCAG
GTGCGGATGAAAGCGCAGAGTCTTCAGCGGCACCTCTGCCAACAGCAGCG
CAGGTATATGTCTTCCATCTGGAGGGTTCTGCTTTCCTGTGGCATCAGGT
CCGACATATGGTCAATGTCCTTTTCCTCGTCGGTCAGGGACTCGAGGAAC
CATCCATTGTACAGGATCTCCTTGACGTGACCAAGAACCCGCGAAAACCA
ACCTACGAGATGGCTTCTGATGCCCCCCTGGTGCTTTGGGACTGCATCTA
CCCCGATAAGAAGAGCGGCAGCCGTGCTGATAGCTTGGATTGGGTTTATG
CGGGCGACGTTCGGCAGATCAAGTCTCACCTCGGTAAGGGAGGTGGAAAG
TTTGGTCTTGGAGGGATTGTAGAGGAGCTCTGGTCCGTTTGGAGGCAGCG
CAAGATGGAGGAAATCCTTGCTGGCGCATTACTGGACTTGGCCGTTAGTC
AGGGCGACAAGAGGCTCACTATTGGTGATGGAGTCGAGCCAATCTGGGAG
AGAAAGAACCGGGGTAAGAAAATCTTCGTTGGGTCGAATGAAGCCAGAAC
CGGCGGGTACTATGTCCCAGTCATGCAGAAGAGAAAGACAGAGCTCGTGG
AAGTCCAGAACGCGAGGTGGCTGGCGGCAAAGCAGCGCAGGATGGAGAAT
GGCGCAAAGGCCACCAAGATGGAATAG
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Coding sequence (CDS) from alignment at ch4:3885690..3887516-

>KJC3_005836-T1 ID=KJC3_005836-T1|Name=KJC3_005836-T1|organism=Aspergillus niger KJC3|type=CDS|length=1827bp|location=Sequence derived from alignment at ch4:3885690..3887516- (Aspergillus niger KJC3)
ATGTCCGGGAACACAGCGGAGGGCCAACAAGTCCCTACCCACGAAACCGA
CTATTCAACATGGACTACGTCGAGACTTGTTGCCCGAATCACTGAACTAG
AACGCCAGTTACATTCCCGCACAGCAGAGTACGCTGCATCCCCTGCGAAG
CAGCCCGAGGACGCGGCCAAAGACGCTGCCAAGAGTGCACCGAGTGATGG
GAAAGTGAACCAGAAGGAGCCTTCATCTCCTGCGGTGGGAGCGGAGAAGA
AGAAGCAGGTGAAGCCGCCAAAGCCGCCGAAACCGCGCCGGGAAATTGAT
CCGTCGAGATACAATACACGGTTCATCGCGTTGAAGTTCGCCTACCTTGG
ACAGCGGTACAATGGGCTTGAGCATGCAAACGGGAATGCCACGCCGCTAC
CTACGATCGAGGAGGAGATGTACAAGGCTCTACGGAAGACGCGGTTGATT
TTCCCGACGGATACAACCGGTGATGAATTCGTGGAGAGCTATGCGCCGAG
AGAGACGAAGCCGTATTATATCAATTGGGATGGATGTGAATATTCCAAGG
CTGGGCGTACGGACCGAGGAGTCAGTGCCTTCGGGCAAGTGATTGGCATT
AGAGTGCGGAGTGCACGGCCGAAGCGCGACGAGGTTGTGCAGTCGGACGA
AAACGCCGATACCACCATGCAGAATACGGACGAGGCTAATGCTTCGGTCG
ACGATGGCTGGGACGACATCAAAGATGAGCTACCCTACGTGAGCATGTTG
AACAAGGTGCTTCCTGAGGATATTCGTGTATTGGCATGGTGCCCGCGTCC
TCCTGAGGGGTTCGATGCCCGCTTTTCTTGCGGGGAACGCCATTACAAGT
ATTTCTTCACGCAGCCAGCCTTTTCTCCTACGCCGGGCGCTTCGGGCTTT
GTGCCGCGAGATGGAACAGGCAAGCCTCCGAAGCTGAGAGAGGGTTGGTT
AGACATTGAAGCGATGCGCAAAGCTGCGAAGTATTTCGAAGGGACACACG
ACTTCCGGAACTTCTGTAAATTGGACGTGACGAAACAAATCGAGTCTTTC
TACCGAGACATCTTCCGTGCCGACATTGAGCTTCTCGATGCTCGCACCAA
TCCACTGGGCTATGTGACTCAGCCGGAATTCCAGGCTAGACCGGCCTCAG
GTGCGGATGAAAGCGCAGAGTCTTCAGCGGCACCTCTGCCAACAGCAGCG
CAGGTATATGTCTTCCATCTGGAGGGTTCTGCTTTCCTGTGGCATCAGGT
CCGACATATGGTCAATGTCCTTTTCCTCGTCGGTCAGGGACTCGAGGAAC
CATCCATTGTACAGGATCTCCTTGACGTGACCAAGAACCCGCGAAAACCA
ACCTACGAGATGGCTTCTGATGCCCCCCTGGTGCTTTGGGACTGCATCTA
CCCCGATAAGAAGAGCGGCAGCCGTGCTGATAGCTTGGATTGGGTTTATG
CGGGCGACGTTCGGCAGATCAAGTCTCACCTCGGTAAGGGAGGTGGAAAG
TTTGGTCTTGGAGGGATTGTAGAGGAGCTCTGGTCCGTTTGGAGGCAGCG
CAAGATGGAGGAAATCCTTGCTGGCGCATTACTGGACTTGGCCGTTAGTC
AGGGCGACAAGAGGCTCACTATTGGTGATGGAGTCGAGCCAATCTGGGAG
AGAAAGAACCGGGGTAAGAAAATCTTCGTTGGGTCGAATGAAGCCAGAAC
CGGCGGGTACTATGTCCCAGTCATGCAGAAGAGAAAGACAGAGCTCGTGG
AAGTCCAGAACGCGAGGTGGCTGGCGGCAAAGCAGCGCAGGATGGAGAAT
GGCGCAAAGGCCACCAAGATGGAATAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0009451RNA modification
GO:0001522pseudouridine synthesis
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0009982pseudouridine synthase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005836KJC3_005836Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005836-T1.cdsKJC3_005836-T1.cdsAspergillus niger KJC3CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005836-T1.exon1KJC3_005836-T1.exon1Aspergillus niger KJC3exon


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005836-T1KJC3_005836-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09263UAJ
DBxrefInterPro:IPR020103
DBxrefInterPro:IPR001406
DBxrefInterPro:IPR020095
DBxrefInterPro:IPR020097
DBxrefPFAM:PF01416
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3885690..3887516 -
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