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KJC3_005839-T1, KJC3_005839-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005839-T1
Unique NameKJC3_005839-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3890998..3892264+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005839-T1 ID=KJC3_005839-T1|Name=KJC3_005839-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1267bp|location=Sequence derived from alignment at ch4:3890998..3892264+ (Aspergillus niger KJC3)
CGGAAGTGTTATTTGTCAATCATTGCGGTCACTCCCTCTTCAATTCGTGA
GAATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGT
AAATACTATCTTGTTGCTCCTCCCTCCTGATTCGCGCCTAGTAACTCACC
GGGTTGTCGTTATCCCAGGCCCTTCCTCCGTGCAGCTCCCATTTGCAGCA
TTGTCGCTCAACCCGGCGAAAACCTCCGTAAGAGCTGGGTCTACAGAGTC
TCGAGAGCGCAGACGCCATGACCCTTTCCTTATGGCGCAATCTCGCCAAC
GCAAGGCCGCCAACATCTCTCGCCAGAAAGCCCTCACCAAAGAGCGCGAA
GGGTCTGTCGGAGACCCCGTCCAAAGCGAACCTACACCCTTTATCCAGGA
ACTCAGAAAGACCCAAGCGACTTTGCAGGACACAGACCTCAATTACTTCG
TCACACCGGATGGTCTCAATGAGGCGATGGAGTACTCGAAGAACCTGACA
TCACCGATTCGGAACCCGGACCGCGACACTGCTGATCCTCAGCTCGAGAA
AGAAGCGGCTGAGAAGCATCTTCAAGAACATCGGAATGCACAGGAAGCCA
TCCGTCGTATTGTCAGTGTCGCCAACGGAAACACAAAGGACCACATGCGG
CTTCACATCCAGAAATGCATTGAGACCTTTGGCCGGCATAAGACCGACAG
CGTATTGCCGCCCAAGCCATCTGGCGTATCGCATGACTCTGCGACTGTTC
ATCTTGAGAAAACTCCCCGCGTTGGTCCGGATACTGGCTCTCCGGAAGTA
CAGGTTGCCATTCTCACTGCAAAGATCATGAACTTGTCTAGACATCTCCA
GACGACGAAAAAGGACCGACACAACAAGCGCAACTTGCGTCTACTTGTTC
ACAAGAGACAGAAGTTGCTTCGTTACTTGCGGAGGAAGGAAAGAGGTGGT
CCCCGGTGGCAGAATCTGATGGAGAAGCTGGGTCTCTCGGAAGCTGCTTG
GAAGGGTGAGATCTCCATGTAAATTAGCTATTTGGCGCTTGTATTCTACA
TATTTTCTTTTCTTTGTATTTTCTCTGCCTAAGCTCAATCTCAGCGTGTA
ACCTTATGTCTCGATCAAGGGTTCTTCCTGTTTTATAGTCTGTATGACAA
AGAACCCGTGGGTAATCTACTATCTGCGTGATCTGCTGTGAAAATGTCTC
CTGTATATATTTTATAACCTTTCGTGCCGTAACACGATGTGCCTCAGCAG
ATGTACTTCACTCGTCT
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Coding sequence (CDS) from alignment at ch4:3890998..3892264+

>KJC3_005839-T1 ID=KJC3_005839-T1|Name=KJC3_005839-T1|organism=Aspergillus niger KJC3|type=CDS|length=1800bp|location=Sequence derived from alignment at ch4:3890998..3892264+ (Aspergillus niger KJC3)
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
ATGCCTCCCCGCATTCTACTCCAGCCTTCATTGAGGGCCCTCACAGGCCC
TTCCTCCGTGCAGCTCCCATTTGCAGCATTGTCGCTCAACCCGGCGAAAA
CCTCCGTAAGAGCTGGGTCTACAGAGTCTCGAGAGCGCAGACGCCATGAC
CCTTTCCTTATGGCGCAATCTCGCCAACGCAAGGCCGCCAACATCTCTCG
CCAGAAAGCCCTCACCAAAGAGCGCGAAGGGTCTGTCGGAGACCCCGTCC
AAAGCGAACCTACACCCTTTATCCAGGAACTCAGAAAGACCCAAGCGACT
TTGCAGGACACAGACCTCAATTACTTCGTCACACCGGATGGTCTCAATGA
GGCGATGGAGTACTCGAAGAACCTGACATCACCGATTCGGAACCCGGACC
GCGACACTGCTGATCCTCAGCTCGAGAAAGAAGCGGCTGAGAAGCATCTT
CAAGAACATCGGAATGCACAGGAAGCCATCCGTCGTATTGTCAGTGTCGC
CAACGGAAACACAAAGGACCACATGCGGCTTCACATCCAGAAATGCATTG
AGACCTTTGGCCGGCATAAGACCGACAGCGTATTGCCGCCCAAGCCATCT
GGCGTATCGCATGACTCTGCGACTGTTCATCTTGAGAAAACTCCCCGCGT
TGGTCCGGATACTGGCTCTCCGGAAGTACAGGTTGCCATTCTCACTGCAA
AGATCATGAACTTGTCTAGACATCTCCAGACGACGAAAAAGGACCGACAC
AACAAGCGCAACTTGCGTCTACTTGTTCACAAGAGACAGAAGTTGCTTCG
TTACTTGCGGAGGAAGGAAAGAGGTGGTCCCCGGTGGCAGAATCTGATGG
AGAAGCTGGGTCTCTCGGAAGCTGCTTGGAAGGGTGAGATCTCCATGTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005839KJC3_005839Aspergillus niger KJC3gene


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005839-T1.utr5p1KJC3_005839-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005839-T1.exon1KJC3_005839-T1.exon1Aspergillus niger KJC3exon
KJC3_005839-T1.exon2KJC3_005839-T1.exon2Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005839-T1.cdsKJC3_005839-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005839-T1.utr3p1KJC3_005839-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005839-T1KJC3_005839-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092643JW
DBxrefInterPro:IPR009068
DBxrefInterPro:IPR005290
DBxrefInterPro:IPR000589
DBxrefPFAM:PF00312
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3890998..3892264 +
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