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KJC3_005860-T1, KJC3_005860-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005860-T1
Unique NameKJC3_005860-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:3959198..3961322-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005860-T1 ID=KJC3_005860-T1|Name=KJC3_005860-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2125bp|location=Sequence derived from alignment at ch4:3959198..3961322- (Aspergillus niger KJC3)
CCCATTTCTTTTCCATCTTCCCCTTCTCTTCATTTCCATCGTTTCCGTGT
TGCTTCTTTCTCGTTGGGTCGGTGGAGTCCCAAGGTTACAAATACACCCT
TCGAACCCGGGCGCGATCGCACCCATAAATCTTGGTTCCCTCTCAGCACG
CAAGTTTAAGTTACCCGCACGCAGTATCACCATCCTCTGTGCTGCCCGTG
TTGCTGTTAAAATATGGGTGCCTATCGTCTGGGTAAGTTATTCTTTTCGC
TCACGGTTCTGCTTGCCTTCTTTCAAGATGAGTTTCTCGCCGTCTCGCTT
TTGGACGTTGGTTTCACTGTTTGCTTTTCCCATGGCGTTGTTGTCAACTT
GCTTGACTGGGATGGGGATGCGTTTGTTGTCCAGCGGTGACTGCCAACTG
TCATATTGAGCCAAATCTTGAACGAATTTTGTTCGGCTTGCCCCAAGCAT
GCTGTTTTTATTTGCATGATATTTTCGACCGAATCTACACATCTTGCTCA
AATCTAACCATCTACACAGAGCAAGCCTCAACCGGCCGCGCCGGTTGCAA
AAACAAAGAATGTAAAGACCAGGGCATCAAGATCCTCAAGGGCGAGTTGC
GTCATGGCTCCTGGGTTGATACCGAACGGTTTCAGAGCTACTTCTGGCGT
CACTGGTAAGTCTAGGAGATGAAAATTCGGACGAAAGAAGCGCCCTGCTA
ATGCCTTATACAGGGGCTGTGTCACCCCCAAGATCATTGCTAATATGATT
GAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGTCAGCCTTGGATGGCTA
TGACGAACTCCCTGAAGATTTGCAGGAGAAGGTTCGCAGAGCATTGTTGC
AGGGCCATGTTGATGATGAAGATTGGAAGGGGGTAAGTTTTTAGAATCAG
TTTCATACTTAATTTCAACTTTTCTGTCTGTAAGAAGTCTGACTTTTGTC
TCAGGATGTCGAATTAAATCGGCCTGGAAAGACGGGATTTCGGAAGCGTG
TGACCAAGAAGGACAAGGTATGTTCTTCCGCTCCAAGAATCTAGCTCTAT
CGATGCTAATCTGCCCAGGACGAAACCCCAGAGGAGTCCACTCCAAAGAA
GGCCACTCCTCAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAAT
CCGGCTCTGAAGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAA
AAGGCCACTCCCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGA
AGCCGAGTCTGAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCA
AGAAGGCCGCTCCCCAGACCAAGAAGCGTACCAAAGCTGGAGCCGAAGCT
GAAGCTGATGAAGCTAAAGACACGCCCAAGACTAAGAAGCCCAGAAAGAA
CAGTGCTGCCTCCAAGCAAGCACCTGTCGAGGATGACGAGTCCGATGCTC
CTCTGGTCGAAACGAACAAGAAGGCGGCCGCCACTAAGGGTAAGCGGGGC
AAAGCTGCTGCTGCTGCTCCTGCTGCTGAGGAGCCCGCCACTACTCGTCC
CAAAAGGGGCAGACCCGCGGCAAAGAAGAAGCAAGCCCCCGTTGCTGACG
ATGAGGGTGAAGCTGAGCCTGAGCCTGCCGAAAAACCAAAGCGGACATAC
AAGAAGAGAAAGTCTACCTAAAGAATTGGTGCGGTCCTGGAATTCAGGCA
TTAGTGAGCTGGTCATGTAGAAGAAGTTATGAAGGGGAGTGCTTTGTTTC
GGTCTATTCTATCATTCACCTTTCCTTTCATATGTCTTGTCTTCTAATTG
TCATTTTCTCCTGTTATGTGCTACCTGTGATATTGATATCGGTGTCAATA
CTGTGCATTTTAACACTGTCACTACCTTAAGACTGTCCTATGTTGTTGCT
GCTGGCGTGAGCGTGACTATTCTGTGTGTACATGCATGCTGTGCTGGTAT
TTCCAGTCTCATATTTCTATTGTCATGTATCTTGTCCAGCGGTTCTTGTA
TCTAATCAGTCATGTCATGGTTATGTTATGCGTTGATAGGCTGTAATATT
ATCACTATTGCTAGGGCAGGCATTTCATACCTGGCTTGACTCACTATTGA
CAGTAGATCATGAAACTATCAGTCG
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Coding sequence (CDS) from alignment at ch4:3959198..3961322-

>KJC3_005860-T1 ID=KJC3_005860-T1|Name=KJC3_005860-T1|organism=Aspergillus niger KJC3|type=CDS|length=4950bp|location=Sequence derived from alignment at ch4:3959198..3961322- (Aspergillus niger KJC3)
GACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTCCTCAGAGTAA
GAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAAGCTGAGG
AAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCCCCAGACC
AAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTGAGGCTGA
AGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCCGCTCCCCAGA
CCAAGAAGCGTACCAAAGCTGGAGCCGAAGCTGAAGCTGATGAAGCTAAA
GACACGCCCAAGACTAAGAAGCCCAGAAAGAACAGTGCTGCCTCCAAGCA
AGCACCTGTCGAGGATGACGAGTCCGATGCTCCTCTGGTCGAAACGAACA
AGAAGGCGGCCGCCACTAAGGGTAAGCGGGGCAAAGCTGCTGCTGCTGCT
CCTGCTGCTGAGGAGCCCGCCACTACTCGTCCCAAAAGGGGCAGACCCGC
GGCAAAGAAGAAGCAAGCCCCCGTTGCTGACGATGAGGGTGAAGCTGAGC
CTGAGCCTGCCGAAAAACCAAAGCGGACATACAAGAAGAGAAAGTCTACC
TAAGATGTCGAATTAAATCGGCCTGGAAAGACGGGATTTCGGAAGCGTGT
GACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGATCATTGCTAATATG
ATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGTCAGCCTTGGATGG
CTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGTTCGCAGAGCATTGT
TGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGAGCAAGCCTCAACCG
GCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACCAGGGCATCAAGATC
CTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGATACCGAACGGTTTCA
GAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGTCTGGGACGAAACCC
CAGAGGAGTCCACTCCAAAGAAGGCCACTCCTCAGAGTAAGAAACGCGCT
CGCGCTGAGCCCAAGGAGGAATCCGGCTCTGAAGCTGAGGAAGGAGACAC
CAAGGAAAAGCCTAAGGCTAAAAAGGCCACTCCCCAGACCAAGAAGCGCG
CTCGTGCGGAGCCTAAGAAAGAAGCCGAGTCTGAGGCTGAAGAAGAGGTT
ACTAAAGAGACGCCTAAGACCAAGAAGGCCGCTCCCCAGACCAAGAAGCG
TACCAAAGCTGGAGCCGAAGCTGAAGCTGATGAAGCTAAAGACACGCCCA
AGACTAAGAAGCCCAGAAAGAACAGTGCTGCCTCCAAGCAAGCACCTGTC
GAGGATGACGAGTCCGATGCTCCTCTGGTCGAAACGAACAAGAAGGCGGC
CGCCACTAAGGGTAAGCGGGGCAAAGCTGCTGCTGCTGCTCCTGCTGCTG
AGGAGCCCGCCACTACTCGTCCCAAAAGGGGCAGACCCGCGGCAAAGAAG
AAGCAAGCCCCCGTTGCTGACGATGAGGGTGAAGCTGAGCCTGAGCCTGC
CGAAAAACCAAAGCGGACATACAAGAAGAGAAAGTCTACCTAAGATGTCG
AATTAAATCGGCCTGGAAAGACGGGATTTCGGAAGCGTGTGACCAAGAAG
GACAAGGGGCTGTGTCACCCCCAAGATCATTGCTAATATGATTGAAACGG
TCGGTGAAGAAGGCGAGAGAGACTGGTCAGCCTTGGATGGCTATGACGAA
CTCCCTGAAGATTTGCAGGAGAAGGTTCGCAGAGCATTGTTGCAGGGCCA
TGTTGATGATGAAGATTGGAAGGGGAGCAAGCCTCAACCGGCCGCGCCGG
TTGCAAAAACAAAGAATGTAAAGACCAGGGCATCAAGATCCTCAAGGGCG
AGTTGCGTCATGGCTCCTGGGTTGATACCGAACGGTTTCAGAGCTACTTC
TGGCGTCACTGATGGGTGCCTATCGTCTGGGACGAAACCCCAGAGGAGTC
CACTCCAAAGAAGGCCACTCCTCAGAGTAAGAAACGCGCTCGCGCTGAGC
CCAAGGAGGAATCCGGCTCTGAAGCTGAGGAAGGAGACACCAAGGAAAAG
CCTAAGGCTAAAAAGGCCACTCCCCAGACCAAGAAGCGCGCTCGTGCGGA
GCCTAAGAAAGAAGCCGAGTCTGAGGCTGAAGAAGAGGTTACTAAAGAGA
CGCCTAAGACCAAGAAGGCCGCTCCCCAGACCAAGAAGCGTACCAAAGCT
GGAGCCGAAGCTGAAGCTGATGAAGCTAAAGACACGCCCAAGACTAAGAA
GCCCAGAAAGAACAGTGCTGCCTCCAAGCAAGCACCTGTCGAGGATGACG
AGTCCGATGCTCCTCTGGTCGAAACGAACAAGAAGGCGGCCGCCACTAAG
GGTAAGCGGGGCAAAGCTGCTGCTGCTGCTCCTGCTGCTGAGGAGCCCGC
CACTACTCGTCCCAAAAGGGGCAGACCCGCGGCAAAGAAGAAGCAAGCCC
CCGTTGCTGACGATGAGGGTGAAGCTGAGCCTGAGCCTGCCGAAAAACCA
AAGCGGACATACAAGAAGAGAAAGTCTACCTAAGATGTCGAATTAAATCG
GCCTGGAAAGACGGGATTTCGGAAGCGTGTGACCAAGAAGGACAAGGGGC
TGTGTCACCCCCAAGATCATTGCTAATATGATTGAAACGGTCGGTGAAGA
AGGCGAGAGAGACTGGTCAGCCTTGGATGGCTATGACGAACTCCCTGAAG
ATTTGCAGGAGAAGGTTCGCAGAGCATTGTTGCAGGGCCATGTTGATGAT
GAAGATTGGAAGGGGAGCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAAC
AAAGAATGTAAAGACCAGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCA
TGGCTCCTGGGTTGATACCGAACGGTTTCAGAGCTACTTCTGGCGTCACT
GATGGGTGCCTATCGTCTGGGACGAAACCCCAGAGGAGTCCACTCCAAAG
AAGGCCACTCCTCAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGA
ATCCGGCTCTGAAGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTA
AAAAGGCCACTCCCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAA
GAAGCCGAGTCTGAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGAC
CAAGAAGGCCGCTCCCCAGACCAAGAAGCGTACCAAAGCTGGAGCCGAAG
CTGAAGCTGATGAAGCTAAAGACACGCCCAAGACTAAGAAGCCCAGAAAG
AACAGTGCTGCCTCCAAGCAAGCACCTGTCGAGGATGACGAGTCCGATGC
TCCTCTGGTCGAAACGAACAAGAAGGCGGCCGCCACTAAGGGTAAGCGGG
GCAAAGCTGCTGCTGCTGCTCCTGCTGCTGAGGAGCCCGCCACTACTCGT
CCCAAAAGGGGCAGACCCGCGGCAAAGAAGAAGCAAGCCCCCGTTGCTGA
CGATGAGGGTGAAGCTGAGCCTGAGCCTGCCGAAAAACCAAAGCGGACAT
ACAAGAAGAGAAAGTCTACCTAAGATGTCGAATTAAATCGGCCTGGAAAG
ACGGGATTTCGGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCC
CCAAGATCATTGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGA
GACTGGTCAGCCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGA
GAAGGTTCGCAGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGA
AGGGGAGCAAGCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTA
AAGACCAGGGCATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGG
GTTGATACCGAACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCC
TATCGTCTGGGACGAAACCCCAGAGGAGTCCACTCCAAAGAAGGCCACTC
CTCAGAGTAAGAAACGCGCTCGCGCTGAGCCCAAGGAGGAATCCGGCTCT
GAAGCTGAGGAAGGAGACACCAAGGAAAAGCCTAAGGCTAAAAAGGCCAC
TCCCCAGACCAAGAAGCGCGCTCGTGCGGAGCCTAAGAAAGAAGCCGAGT
CTGAGGCTGAAGAAGAGGTTACTAAAGAGACGCCTAAGACCAAGAAGGCC
GCTCCCCAGACCAAGAAGCGTACCAAAGCTGGAGCCGAAGCTGAAGCTGA
TGAAGCTAAAGACACGCCCAAGACTAAGAAGCCCAGAAAGAACAGTGCTG
CCTCCAAGCAAGCACCTGTCGAGGATGACGAGTCCGATGCTCCTCTGGTC
GAAACGAACAAGAAGGCGGCCGCCACTAAGGGTAAGCGGGGCAAAGCTGC
TGCTGCTGCTCCTGCTGCTGAGGAGCCCGCCACTACTCGTCCCAAAAGGG
GCAGACCCGCGGCAAAGAAGAAGCAAGCCCCCGTTGCTGACGATGAGGGT
GAAGCTGAGCCTGAGCCTGCCGAAAAACCAAAGCGGACATACAAGAAGAG
AAAGTCTACCTAAGATGTCGAATTAAATCGGCCTGGAAAGACGGGATTTC
GGAAGCGTGTGACCAAGAAGGACAAGGGGCTGTGTCACCCCCAAGATCAT
TGCTAATATGATTGAAACGGTCGGTGAAGAAGGCGAGAGAGACTGGTCAG
CCTTGGATGGCTATGACGAACTCCCTGAAGATTTGCAGGAGAAGGTTCGC
AGAGCATTGTTGCAGGGCCATGTTGATGATGAAGATTGGAAGGGGAGCAA
GCCTCAACCGGCCGCGCCGGTTGCAAAAACAAAGAATGTAAAGACCAGGG
CATCAAGATCCTCAAGGGCGAGTTGCGTCATGGCTCCTGGGTTGATACCG
AACGGTTTCAGAGCTACTTCTGGCGTCACTGATGGGTGCCTATCGTCTGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005860KJC3_005860Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005860-T1KJC3_005860-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005860-T1.cdsKJC3_005860-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005860-T1.utr3p1KJC3_005860-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005860-T1.exon5KJC3_005860-T1.exon5Aspergillus niger KJC3exon
KJC3_005860-T1.exon4KJC3_005860-T1.exon4Aspergillus niger KJC3exon
KJC3_005860-T1.exon3KJC3_005860-T1.exon3Aspergillus niger KJC3exon
KJC3_005860-T1.exon2KJC3_005860-T1.exon2Aspergillus niger KJC3exon
KJC3_005860-T1.exon1KJC3_005860-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005860-T1.utr5p1KJC3_005860-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036957
DBxrefInterPro:IPR001510
DBxrefPFAM:PF00645
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:3959198..3961322 -
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