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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:3970623..3972497- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005865-T1 ID=KJC3_005865-T1|Name=KJC3_005865-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1875bp|location=Sequence derived from alignment at ch4:3970623..3972497- (Aspergillus niger KJC3)
TGGACCACAACACAATACGAGATGGGGCAGAACAACGGGATGTCATCACT
CCGAGTCGGAGATAACGGGCTTTACACCGGCATCGCCGTTCCTCATTTTT
ATTCACCAAACAGGGGACTGCCCTTGCTTTTAAAGTCTAACATGGGCTAA
AGCATACTGGGCTGTATTATTCTTTGAGATCTACGGCGGGAAGTATCCAT
TTACCTTCATTATCAAGGCAGCCGCCACCAAGCATCGTATAAAACCTTCC
CCGCCCTGGAATCTTGAGACAATGCGAACATTCCTGCGAGGCTTCTTTTG
TTTCCGACAGCACAGTGCTCCTGCACCTAGATTGTCATCCCCACAGAGAT
GCAACATGGTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTTTAC
TCTCTGGCCGTTGTCCTCTCCCCGGCTTCCGAGGGACCTGAGGATGTCAA
GGAGAAAGCCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGAGTATG
CCACTCTGTAGCTATCAGAAGACTTTATAGTATCGTGTTACTAACGCACC
TCTGAAGCTCATGGAAATCGCCGTCAGTGGGTGACGCTCTTCACATGTGG
GGGTAAGTTGCAAGACTTTCCTTGCTTTTACTATGCAAGCCTGACACTGC
ACTTTGAAGAGGAATCATAACGGGGAAAATCAAATTCCCGGATGTCACGC
CTCCTACTGTACCTGTTCAGCAGCCCAAGTTTCTGCCAGACCGAGAAACC
TCTAGTCTACGGGCGACATGGCTTGGCCATGCTTGTTACTACGTCGAATT
CCCCAATGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGACCGTTGCT
CTCCCTTCTCATTCATGGGCCCAAAGCGCTACACTGAGATGCCATGCCGC
ATCGAGGACATCCCATTCATTGATGCGGTTGTAATATCCCACAACCATTA
CGATCATCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTCCATCCCA
ATTGCCACTTCTTTGCACCCCTGGGCAATAAAGCATGGTTCAGCAGCATC
GGGATTGACAAAATGACTGAACTGGATTGGTGGGAAGAGCGAGACATTGT
TCTTTCACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCCGGCGAAG
GCCAGAATTCAAATCGATCTGATATCACGGCTCGCATCAGCTGCTTGCCT
TCGCAGCATACAAGCAATCGAGGTGTATTTGATCGATCAAAGACCCTGTG
GGCGTCGTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTTGCAGGGT
ATGTATAATCTCCGAAGAGATGCCTTCAAGTAATCTAACCAAGAACGTCA
TACAGAGACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGGCGCCGA
TGACCATGCTCCGGAGTACACTTTCCCCTCATGTCCCGCATTTAAACAAA
TTGGTCGATTCCGGGGGCCTTTCGACCTCGGGTTGATCCCGATTGGCGCC
TACTCACCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGATGATGC
AGTACAAATTTTCCGGGATACCAACTGCAAGAGAGCCATGGCTATTCACT
GGGGAACTTGGGTTTTGACAGATGAAGATGTCCTTGAACCGCCCAAGAAA
TTAAAGGAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGCGTTTGA
CGTTTGTGACATCGGCGAAAGCCGGGAATTCTAAGGGTCATGTGCGCCTG
GGAAAGTTTGGGGTACTTATTCTACTTACTTTAATATTGCTGTACGATAC
CTGCACGTTGATCATTGTGCGCGCACCGGATAGACGCTCACAACTCTATA
ATCCATAAAAATCTCTCTTCCCCTC back to topCoding sequence (CDS) from alignment at ch4:3970623..3972497- >KJC3_005865-T1 ID=KJC3_005865-T1|Name=KJC3_005865-T1|organism=Aspergillus niger KJC3|type=CDS|length=5148bp|location=Sequence derived from alignment at ch4:3970623..3972497- (Aspergillus niger KJC3)
AGACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGGCGCCGATGACC
ATGCTCCGGAGTACACTTTCCCCTCATGTCCCGCATTTAAACAAATTGGT
CGATTCCGGGGGCCTTTCGACCTCGGGTTGATCCCGATTGGCGCCTACTC
ACCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGATGATGCAGTAC
AAATTTTCCGGGATACCAACTGCAAGAGAGCCATGGCTATTCACTGGGGA
ACTTGGGTTTTGACAGATGAAGATGTCCTTGAACCGCCCAAGAAATTAAA
GGAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGCGTTTGACGTTT
GTGACATCGGCGAAAGCCGGGAATTCTAAAGGAATCATAACGGGGAAAAT
CAAATTCCCGGATGTCACGCCTCCTACTGTACCTGTTCAGCAGCCCAAGT
TTCTGCCAGACCGAGAAACCTCTAGTCTACGGGCGACATGGCTTGGCCAT
GCTTGTTACTACGTCGAATTCCCCAATGGCCTACGAGTACTGTTCGACCC
CGTATTTGAGGACCGTTGCTCTCCCTTCTCATTCATGGGCCCAAAGCGCT
ACACTGAGATGCCATGCCGCATCGAGGACATCCCATTCATTGATGCGGTT
GTAATATCCCACAACCATTACGATCATCTTTCTCATCCAACCGTCAAGGA
AATCTCGCGGCTCCATCCCAATTGCCACTTCTTTGCACCCCTGGGCAATA
AAGCATGGTTCAGCAGCATCGGGATTGACAAAATGACTGAACTGGATTGG
TGGGAAGAGCGAGACATTGTTCTTTCACCCTCGCATGAACCAGTCACGGA
GGCCGGTGCTGCCGGCGAAGGCCAGAATTCAAATCGATCTGATATCACGG
CTCGCATCAGCTGCTTGCCTTCGCAGCATACAAGCAATCGAGGTGTATTT
GATCGATCAAAGACCCTGTGGGCGTCGTGGGGCATCGAAGCTGGAGGTCG
GAAGTTGTGGTTTGCAGGCTCATGGAAATCGCCGTCAGTGGGTGACGCTC
TTCACATGTGGGGATGCGAACATTCCTGCGAGGCTTCTTTTGTTTCCGAC
AGCACAGTGCTCCTGCACCTAGATTGTCATCCCCACAGAGATGCAACATG
GTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTTTACTCTCTGGC
CGTTGTCCTCTCCCCGGCTTCCGAGGGACCTGAGGATGTCAAGGAGAAAG
CCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGAAGACACAGGATAT
CGGCATGTGCCAGAGCTTCCTGCTGGCGCCGATGACCATGCTCCGGAGTA
CACTTTCCCCTCATGTCCCGCATTTAAACAAATTGGTCGATTCCGGGGGC
CTTTCGACCTCGGGTTGATCCCGATTGGCGCCTACTCACCCAGATGGTTC
ATGAGCCCTATGCATGCAGACCCTGATGATGCAGTACAAATTTTCCGGGA
TACCAACTGCAAGAGAGCCATGGCTATTCACTGGGGAACTTGGGTTTTGA
CAGATGAAGATGTCCTTGAACCGCCCAAGAAATTAAAGGAAGCACTCACT
AAGTATGGGTTTCCAGAGGTCGGGGCGTTTGACGTTTGTGACATCGGCGA
AAGCCGGGAATTCTAAAGGAATCATAACGGGGAAAATCAAATTCCCGGAT
GTCACGCCTCCTACTGTACCTGTTCAGCAGCCCAAGTTTCTGCCAGACCG
AGAAACCTCTAGTCTACGGGCGACATGGCTTGGCCATGCTTGTTACTACG
TCGAATTCCCCAATGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGAC
CGTTGCTCTCCCTTCTCATTCATGGGCCCAAAGCGCTACACTGAGATGCC
ATGCCGCATCGAGGACATCCCATTCATTGATGCGGTTGTAATATCCCACA
ACCATTACGATCATCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTC
CATCCCAATTGCCACTTCTTTGCACCCCTGGGCAATAAAGCATGGTTCAG
CAGCATCGGGATTGACAAAATGACTGAACTGGATTGGTGGGAAGAGCGAG
ACATTGTTCTTTCACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCC
GGCGAAGGCCAGAATTCAAATCGATCTGATATCACGGCTCGCATCAGCTG
CTTGCCTTCGCAGCATACAAGCAATCGAGGTGTATTTGATCGATCAAAGA
CCCTGTGGGCGTCGTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTT
GCAGGCTCATGGAAATCGCCGTCAGTGGGTGACGCTCTTCACATGTGGGG
ATGCGAACATTCCTGCGAGGCTTCTTTTGTTTCCGACAGCACAGTGCTCC
TGCACCTAGATTGTCATCCCCACAGAGATGCAACATGGTCAAAGCTACTT
CCGCTGCTTCAACGTCGGCGGCCCTTTACTCTCTGGCCGTTGTCCTCTCC
CCGGCTTCCGAGGGACCTGAGGATGTCAAGGAGAAAGCCCACCATCTCAA
GAATGGCTTTCAAAACCCCTGGGAAGACACAGGATATCGGCATGTGCCAG
AGCTTCCTGCTGGCGCCGATGACCATGCTCCGGAGTACACTTTCCCCTCA
TGTCCCGCATTTAAACAAATTGGTCGATTCCGGGGGCCTTTCGACCTCGG
GTTGATCCCGATTGGCGCCTACTCACCCAGATGGTTCATGAGCCCTATGC
ATGCAGACCCTGATGATGCAGTACAAATTTTCCGGGATACCAACTGCAAG
AGAGCCATGGCTATTCACTGGGGAACTTGGGTTTTGACAGATGAAGATGT
CCTTGAACCGCCCAAGAAATTAAAGGAAGCACTCACTAAGTATGGGTTTC
CAGAGGTCGGGGCGTTTGACGTTTGTGACATCGGCGAAAGCCGGGAATTC
TAAAGGAATCATAACGGGGAAAATCAAATTCCCGGATGTCACGCCTCCTA
CTGTACCTGTTCAGCAGCCCAAGTTTCTGCCAGACCGAGAAACCTCTAGT
CTACGGGCGACATGGCTTGGCCATGCTTGTTACTACGTCGAATTCCCCAA
TGGCCTACGAGTACTGTTCGACCCCGTATTTGAGGACCGTTGCTCTCCCT
TCTCATTCATGGGCCCAAAGCGCTACACTGAGATGCCATGCCGCATCGAG
GACATCCCATTCATTGATGCGGTTGTAATATCCCACAACCATTACGATCA
TCTTTCTCATCCAACCGTCAAGGAAATCTCGCGGCTCCATCCCAATTGCC
ACTTCTTTGCACCCCTGGGCAATAAAGCATGGTTCAGCAGCATCGGGATT
GACAAAATGACTGAACTGGATTGGTGGGAAGAGCGAGACATTGTTCTTTC
ACCCTCGCATGAACCAGTCACGGAGGCCGGTGCTGCCGGCGAAGGCCAGA
ATTCAAATCGATCTGATATCACGGCTCGCATCAGCTGCTTGCCTTCGCAG
CATACAAGCAATCGAGGTGTATTTGATCGATCAAAGACCCTGTGGGCGTC
GTGGGGCATCGAAGCTGGAGGTCGGAAGTTGTGGTTTGCAGGCTCATGGA
AATCGCCGTCAGTGGGTGACGCTCTTCACATGTGGGGATGCGAACATTCC
TGCGAGGCTTCTTTTGTTTCCGACAGCACAGTGCTCCTGCACCTAGATTG
TCATCCCCACAGAGATGCAACATGGTCAAAGCTACTTCCGCTGCTTCAAC
GTCGGCGGCCCTTTACTCTCTGGCCGTTGTCCTCTCCCCGGCTTCCGAGG
GACCTGAGGATGTCAAGGAGAAAGCCCACCATCTCAAGAATGGCTTTCAA
AACCCCTGGGAAGACACAGGATATCGGCATGTGCCAGAGCTTCCTGCTGG
CGCCGATGACCATGCTCCGGAGTACACTTTCCCCTCATGTCCCGCATTTA
AACAAATTGGTCGATTCCGGGGGCCTTTCGACCTCGGGTTGATCCCGATT
GGCGCCTACTCACCCAGATGGTTCATGAGCCCTATGCATGCAGACCCTGA
TGATGCAGTACAAATTTTCCGGGATACCAACTGCAAGAGAGCCATGGCTA
TTCACTGGGGAACTTGGGTTTTGACAGATGAAGATGTCCTTGAACCGCCC
AAGAAATTAAAGGAAGCACTCACTAAGTATGGGTTTCCAGAGGTCGGGGC
GTTTGACGTTTGTGACATCGGCGAAAGCCGGGAATTCTAAAGGAATCATA
ACGGGGAAAATCAAATTCCCGGATGTCACGCCTCCTACTGTACCTGTTCA
GCAGCCCAAGTTTCTGCCAGACCGAGAAACCTCTAGTCTACGGGCGACAT
GGCTTGGCCATGCTTGTTACTACGTCGAATTCCCCAATGGCCTACGAGTA
CTGTTCGACCCCGTATTTGAGGACCGTTGCTCTCCCTTCTCATTCATGGG
CCCAAAGCGCTACACTGAGATGCCATGCCGCATCGAGGACATCCCATTCA
TTGATGCGGTTGTAATATCCCACAACCATTACGATCATCTTTCTCATCCA
ACCGTCAAGGAAATCTCGCGGCTCCATCCCAATTGCCACTTCTTTGCACC
CCTGGGCAATAAAGCATGGTTCAGCAGCATCGGGATTGACAAAATGACTG
AACTGGATTGGTGGGAAGAGCGAGACATTGTTCTTTCACCCTCGCATGAA
CCAGTCACGGAGGCCGGTGCTGCCGGCGAAGGCCAGAATTCAAATCGATC
TGATATCACGGCTCGCATCAGCTGCTTGCCTTCGCAGCATACAAGCAATC
GAGGTGTATTTGATCGATCAAAGACCCTGTGGGCGTCGTGGGGCATCGAA
GCTGGAGGTCGGAAGTTGTGGTTTGCAGGCTCATGGAAATCGCCGTCAGT
GGGTGACGCTCTTCACATGTGGGGATGCGAACATTCCTGCGAGGCTTCTT
TTGTTTCCGACAGCACAGTGCTCCTGCACCTAGATTGTCATCCCCACAGA
GATGCAACATGGTCAAAGCTACTTCCGCTGCTTCAACGTCGGCGGCCCTT
TACTCTCTGGCCGTTGTCCTCTCCCCGGCTTCCGAGGGACCTGAGGATGT
CAAGGAGAAAGCCCACCATCTCAAGAATGGCTTTCAAAACCCCTGGGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005865-T1.utr3p1 | KJC3_005865-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005865-T1.utr5p1 | KJC3_005865-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036866 |
| DBxref | InterPro:IPR001279 |
| DBxref | PFAM:PF13483 |
| DBxref | PFAM:PF12706 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
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| ch4 | supercontig | ch4:3970623..3972497 - |
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