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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4007233..4008467- Legend: exonfive_prime_UTRCDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005878-T1 ID=KJC3_005878-T1|Name=KJC3_005878-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1235bp|location=Sequence derived from alignment at ch4:4007233..4008467- (Aspergillus niger KJC3)
GCGATATTCGCCCAGCTAAGGCACAGATATCTCCAATGGAGCAAAGATGA
GAAGCAATGCAAACATCCAGCAGCCAATGCCTCGATGGCAACCTAAGCTC
TAGCTCCACTACAAGAAAATGTATAAAGCATAAAGCAGAGCAATCCCGCT
CCAACACACCTTAACCCATATCATCTCACTTCCATTTCCACTCCATCCCA
ACAATACTACTTGTGTACAAAATGGCATCTCCCCAAACCACCACCCCCCT
CCCAGTCGTAGCCATTGCCGGCGCAACCGGCCATCTAGGCAAGCACGTCG
TCTCAGCCTTCCTAGCCTCCAACCTACGCAACCGCTTCTCGGAAGTCATC
CTCCTCTCGCGACAAGACAGCCATCAACATCCACCAACAGGCCTCCCCAC
CCCCTCCAACAGCACGCACCCCAAACTCACCATTCGCAAATACACCGAAG
ACGACCCAGCCAGCATCACTCGCGCCCTCCACGGCGCTTCAATCCTCATC
AATACCGTCGGCCCCTCCGGCCACTCCTTCAAAGAGAAACTGCTCCACGC
CATCCCCCAAACATCCATCCAACTCTACTTCCCCTCCGAATTCGGGGTGA
ATCACTACGTGCACGACTTTCCGCATCTAGAATGGGACGCGAAGAAGAAG
CACATGGCGCTGGCGGAGCAGCTACTCACCCAAGGCCCGAAGAAGGTGAA
GATCTGTCGTGTCTTCTGTGGATTGTTCCTGGAGGATAGTATCGGTCCGT
GGTTCGGGTTTGATACGAAGCGTGGAAGGTATGAGAGTGTTGGGAGTAGT
AGGGTGCCCGTGTCGTTTACTTCGTTGGGGGATGTGGGCAGGAGTGTTGC
TGCGTTGGCGAGTTTGAGGGTGGATGAGGTGCCGGAGGTGGTGCATGTTG
CTGGGGATAGTAGAAGTGTCGTGGAGATTGCGGAGGTTATGGGTGGTGCT
GGTGGCGGTGGTGAAGATGGAAAAGGGGAGATAGAGGTGGTGGAGGTTGG
GTTGGAGGAGTATAAGAGGGATGTTACTACGGGGAAGAAGGATTCGTGGG
ATCCGGCGCCTTATTTGAGGTTTTTGATGGGCGAGGGCAAGATTATGCAT
ACGAGGGATGGGTTGGGGGATGATGATGAATTGGTTAATCCGGGGGAGAG
GTTGTGGAAGTGGGAGACGTTGAGGGATTTGGCGGAGAGGACGGGGGGAA
GACCTTGGGGGGATTATGCGTGGCCGCCGAAGTAG back to topCoding sequence (CDS) from alignment at ch4:4007233..4008467- >KJC3_005878-T1 ID=KJC3_005878-T1|Name=KJC3_005878-T1|organism=Aspergillus niger KJC3|type=CDS|length=1014bp|location=Sequence derived from alignment at ch4:4007233..4008467- (Aspergillus niger KJC3)
ATGGCATCTCCCCAAACCACCACCCCCCTCCCAGTCGTAGCCATTGCCGG
CGCAACCGGCCATCTAGGCAAGCACGTCGTCTCAGCCTTCCTAGCCTCCA
ACCTACGCAACCGCTTCTCGGAAGTCATCCTCCTCTCGCGACAAGACAGC
CATCAACATCCACCAACAGGCCTCCCCACCCCCTCCAACAGCACGCACCC
CAAACTCACCATTCGCAAATACACCGAAGACGACCCAGCCAGCATCACTC
GCGCCCTCCACGGCGCTTCAATCCTCATCAATACCGTCGGCCCCTCCGGC
CACTCCTTCAAAGAGAAACTGCTCCACGCCATCCCCCAAACATCCATCCA
ACTCTACTTCCCCTCCGAATTCGGGGTGAATCACTACGTGCACGACTTTC
CGCATCTAGAATGGGACGCGAAGAAGAAGCACATGGCGCTGGCGGAGCAG
CTACTCACCCAAGGCCCGAAGAAGGTGAAGATCTGTCGTGTCTTCTGTGG
ATTGTTCCTGGAGGATAGTATCGGTCCGTGGTTCGGGTTTGATACGAAGC
GTGGAAGGTATGAGAGTGTTGGGAGTAGTAGGGTGCCCGTGTCGTTTACT
TCGTTGGGGGATGTGGGCAGGAGTGTTGCTGCGTTGGCGAGTTTGAGGGT
GGATGAGGTGCCGGAGGTGGTGCATGTTGCTGGGGATAGTAGAAGTGTCG
TGGAGATTGCGGAGGTTATGGGTGGTGCTGGTGGCGGTGGTGAAGATGGA
AAAGGGGAGATAGAGGTGGTGGAGGTTGGGTTGGAGGAGTATAAGAGGGA
TGTTACTACGGGGAAGAAGGATTCGTGGGATCCGGCGCCTTATTTGAGGT
TTTTGATGGGCGAGGGCAAGATTATGCATACGAGGGATGGGTTGGGGGAT
GATGATGAATTGGTTAATCCGGGGGAGAGGTTGTGGAAGTGGGAGACGTT
GAGGGATTTGGCGGAGAGGACGGGGGGAAGACCTTGGGGGGATTATGCGT
GGCCGCCGAAGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005878-T1.utr5p1 | KJC3_005878-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008030 |
| DBxref | PFAM:PF05368 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4007233..4008467 - |
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