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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4008899..4011430- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005879-T1 ID=KJC3_005879-T1|Name=KJC3_005879-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2532bp|location=Sequence derived from alignment at ch4:4008899..4011430- (Aspergillus niger KJC3)
CCCTCGCGCTATTGTTCCGTCAACAAGCACCCTCTTAAAATGCACAACAT
TTGGCAAAGGTCCTCCTCCACAAGAAGGAGACGATCCAGAGATCGACAAG
GCCTCTTTAACCGCTTTTCCTGGGATGAACGAGCGATTCATGGAAGGGCG
CACGACGCCCTCGTTGTTCCTGAAAAGAATGTCCATTCATCCCGTGCGGA
GCCTGTACACTCTGGAGAAGCAATTGTCGTTCGTAATACTGCAGCTCATA
ACAACGACACTAAGATTTCTTCACTAGGCACACTCTCCAGAATACTGTCG
GTATCACAGGATGGGCCACGAAACGATGGGTCTACCATCTGGACTCCCTC
ATCGACAAAAGATAAGACCATTCATTATGAGATGGACATCGTGGAGGATG
TGGGAAGCCTGTTGGAGGAATTCTCGCGACTCAAGAGACTAGGCCATTTC
CAGGAAGCGGAACAATACTTTCAAGATTCCTTGAGTGCGTTTATGGAACT
ATCACCAGTTACAATTGAGTTCGCAGACATGCTAGTCGAACAAGGTTCGT
ACGAGCGTTTGCATCGCGTTCTGTCGCAGCACCAACAGCAGGAGCTAGAT
ACATTTGACAGTATCTCAAGCCTGCCGGAGAACAACCGTGCCAGATTTCT
ATATCAAGCGAACTTGCACCTCATACAGCAATTCGCGGCCATGCAGTCCC
ACGGGTCGCTGGACGAGGCATATGTAACAGTCCGATCCTTGGAGCGCCAA
ATGCGTGTCCTAAGGCGACGTTGGAGGAGGGACTCGACTCTTGATCTGGA
CTCGGCTGAAGTAAGTCCGATTTAATGGGATACTCAAGCGACTGGCAAAG
ACTAATAGTACAGGCAGGTGCAAGTGATCCGTTATGCGCTATTGATTCTA
TCGCAGGTTGAGCGTGAAACAAATTTGATTGCAGAGCATGAGTTCAATTT
CTGGTCTAACTGGCACTATCTGTACAGCGCTCTCGTGACTGAAGGGCGAG
TATGGGATGCGCGAGATCTAATACTCGCTTCCATTCAGACGGAAGGTCCA
GCAAATTCGTGGAACTTGATCTTCGAAGTAGAACTTGATTCTCCCAAGGA
TGCGTTTCGCAAACTCATTGGCGACTGGGGCTTGCATCGGTACGATGAGT
CAACATATCTCGCCATTCTAGATATTCTAGTGTGTCTGAGCCGCGGTTTG
TCCTCATGGTCTATCTCGTTACCAGAGAGACAGGACTTGCTCACTGCTCA
ACGATGCCTCCAGTATGGGCAAGCCCTTGCAACCTGCCTCAAGGAGAACA
ACCCGCAGCTGGTAAAATCTCGTCCTTACCTACAGTGGGTTATTGCTGAA
GCGGAACTGGAGAGGAAGCTTCAACCCAACACCTCAGGTTTAGATCTGCG
AGACCACCTTAGCAAATTTCCAGGCCTGACCATCTGGAGGGGCGCTGTTC
CTATTTATCTTCCTATCAAAATGGAGAACCCGAAGTGGACGGTGCCTAGA
GACGGTGGACGGAGCTATGATCTTCTTGAAACCGTCCTTCAAGCGGCACA
AGACCTGAAGGACTACAGGACAGAGGCCTTATGCTTGGGTGAGCTAATCT
ATCGTTCAGTAAACACGAGCGAAAGATTGACTCGGTTATCCCATCTCCAG
AAGTCCATTCAGGGGGATATTGTCGGCTATCGACAGACGTCCCTGTCGTG
GTTCCTTCTTGCTGACACTGAACAAGACTACAAGCTTCTTCTAGACAGCT
TGAAAAACATACAGGAACCGAAACGATCCCTAGGATTTCTCTATTCTCTG
AGTGACTGGTGTGCAATTGTTATCGAACGAGCTATTTCACACTGCCTGGC
GGAGGATGTATCGTCTTCTGAAGAAGCTTTCCAAAACACCAAGGAGGGCT
TCTCTATCTACCTCCCGCAATACATAAAAGACCAGTTAGAGGCGCTCGGT
CTGAATAAGGTATACTTCGCAGTCTCAAGGGTCGGAAAGCCCCAGGCACC
TGACATACGACATCGCAATATCACAGACGTTCCGACAATGGAACAGTATA
CTCGACCCCACGATTCTTTTGAGAGTTTGGGTGACGAGAGACATGGGCAG
TCTGAGCCACTGCTCTCCTTTCAGAGACGACCAGAGCGCACGTACACAGA
AACTGTGAAAATCAATGATAGTGATGATGATGACGATTATGATGATGATG
ATGATTCCGATGATGACGTTGGCGAGTATACCACCGACAGCAGCTTCGAC
ACAGCTAGATCAGATGATGGTTGGGTGAATGGTGAGAGGGCTCATTTGAC
ATCGCTCGTTCGTAGTACTTCACGATTTGGTCCAAGTGAGTCAAGGGCCT
GAATTATTTTGCAGCCAATCGTTGCTTACCTTTACGTCTTCTAGATTCGA
GAAGCGCGACCGTTGAAGATGTCAGTAGTAGCATATATGAGGGATAATCG
TGCGACTATGCGTTGTGAAATTCCAAGTGAAGTAGTTTCGACGGCTAGAA
TCTATAATACATAGAACTAAAGTACCTCGACT back to topCoding sequence (CDS) from alignment at ch4:4008899..4011430- >KJC3_005879-T1 ID=KJC3_005879-T1|Name=KJC3_005879-T1|organism=Aspergillus niger KJC3|type=CDS|length=6876bp|location=Sequence derived from alignment at ch4:4008899..4011430- (Aspergillus niger KJC3)
ATTCGAGAAGCGCGACCGTTGAAGATGTCAGTAGTAGCATATATGAGGGA
TAAGTGCAAGTGATCCGTTATGCGCTATTGATTCTATCGCAGGTTGAGCG
TGAAACAAATTTGATTGCAGAGCATGAGTTCAATTTCTGGTCTAACTGGC
ACTATCTGTACAGCGCTCTCGTGACTGAAGGGCGAGTATGGGATGCGCGA
GATCTAATACTCGCTTCCATTCAGACGGAAGGTCCAGCAAATTCGTGGAA
CTTGATCTTCGAAGTAGAACTTGATTCTCCCAAGGATGCGTTTCGCAAAC
TCATTGGCGACTGGGGCTTGCATCGGTACGATGAGTCAACATATCTCGCC
ATTCTAGATATTCTAGTGTGTCTGAGCCGCGGTTTGTCCTCATGGTCTAT
CTCGTTACCAGAGAGACAGGACTTGCTCACTGCTCAACGATGCCTCCAGT
ATGGGCAAGCCCTTGCAACCTGCCTCAAGGAGAACAACCCGCAGCTGGTA
AAATCTCGTCCTTACCTACAGTGGGTTATTGCTGAAGCGGAACTGGAGAG
GAAGCTTCAACCCAACACCTCAGGTTTAGATCTGCGAGACCACCTTAGCA
AATTTCCAGGCCTGACCATCTGGAGGGGCGCTGTTCCTATTTATCTTCCT
ATCAAAATGGAGAACCCGAAGTGGACGGTGCCTAGAGACGGTGGACGGAG
CTATGATCTTCTTGAAACCGTCCTTCAAGCGGCACAAGACCTGAAGGACT
ACAGGACAGAGGCCTTATGCTTGGGTGAGCTAATCTATCGTTCAGTAAAC
ACGAGCGAAAGATTGACTCGGTTATCCCATCTCCAGAAGTCCATTCAGGG
GGATATTGTCGGCTATCGACAGACGTCCCTGTCGTGGTTCCTTCTTGCTG
ACACTGAACAAGACTACAAGCTTCTTCTAGACAGCTTGAAAAACATACAG
GAACCGAAACGATCCCTAGGATTTCTCTATTCTCTGAGTGACTGGTGTGC
AATTGTTATCGAACGAGCTATTTCACACTGCCTGGCGGAGGATGTATCGT
CTTCTGAAGAAGCTTTCCAAAACACCAAGGAGGGCTTCTCTATCTACCTC
CCGCAATACATAAAAGACCAGTTAGAGGCGCTCGGTCTGAATAAGGTATA
CTTCGCAGTCTCAAGGGTCGGAAAGCCCCAGGCACCTGACATACGACATC
GCAATATCACAGACGTTCCGACAATGGAACAGTATACTCGACCCCACGAT
TCTTTTGAGAGTTTGGGTGACGAGAGACATGGGCAGTCTGAGCCACTGCT
CTCCTTTCAGAGACGACCAGAGCGCACGTACACAGAAACTGTGAAAATCA
ATGATAGTGATGATGATGACGATTATGATGATGATGATGATTCCGATGAT
GACGTTGGCGAGTATACCACCGACAGCAGCTTCGACACAGCTAGATCAGA
TGATGGTTGGGTGAATGGTGAGAGGGCTCATTTGACATCGCTCGTTCGTA
GTACTTCACGATTTGGTCCAAATGCACAACATTTGGCAAAGGTCCTCCTC
CACAAGAAGGAGACGATCCAGAGATCGACAAGGCCTCTTTAACCGCTTTT
CCTGGGATGAACGAGCGATTCATGGAAGGGCGCACGACGCCCTCGTTGTT
CCTGAAAAGAATGTCCATTCATCCCGTGCGGAGCCTGTACACTCTGGAGA
AGCAATTGTCGTTCGTAATACTGCAGCTCATAACAACGACACTAAGATTT
CTTCACTAGGCACACTCTCCAGAATACTGTCGGTATCACAGGATGGGCCA
CGAAACGATGGGTCTACCATCTGGACTCCCTCATCGACAAAAGATAAGAC
CATTCATTATGAGATGGACATCGTGGAGGATGTGGGAAGCCTGTTGGAGG
AATTCTCGCGACTCAAGAGACTAGGCCATTTCCAGGAAGCGGAACAATAC
TTTCAAGATTCCTTGAGTGCGTTTATGGAACTATCACCAGTTACAATTGA
GTTCGCAGACATGCTAGTCGAACAAGGTTCGTACGAGCGTTTGCATCGCG
TTCTGTCGCAGCACCAACAGCAGGAGCTAGATACATTTGACAGTATCTCA
AGCCTGCCGGAGAACAACCGTGCCAGATTTCTATATCAAGCGAACTTGCA
CCTCATACAGCAATTCGCGGCCATGCAGTCCCACGGGTCGCTGGACGAGG
CATATGTAACAGTCCGATCCTTGGAGCGCCAAATGCGTGTCCTAAGGCGA
CGTTGGAGGAGGGACTCGACTCTTGATCTGGACTCGGCTGAAATTCGAGA
AGCGCGACCGTTGAAGATGTCAGTAGTAGCATATATGAGGGATAAGTGCA
AGTGATCCGTTATGCGCTATTGATTCTATCGCAGGTTGAGCGTGAAACAA
ATTTGATTGCAGAGCATGAGTTCAATTTCTGGTCTAACTGGCACTATCTG
TACAGCGCTCTCGTGACTGAAGGGCGAGTATGGGATGCGCGAGATCTAAT
ACTCGCTTCCATTCAGACGGAAGGTCCAGCAAATTCGTGGAACTTGATCT
TCGAAGTAGAACTTGATTCTCCCAAGGATGCGTTTCGCAAACTCATTGGC
GACTGGGGCTTGCATCGGTACGATGAGTCAACATATCTCGCCATTCTAGA
TATTCTAGTGTGTCTGAGCCGCGGTTTGTCCTCATGGTCTATCTCGTTAC
CAGAGAGACAGGACTTGCTCACTGCTCAACGATGCCTCCAGTATGGGCAA
GCCCTTGCAACCTGCCTCAAGGAGAACAACCCGCAGCTGGTAAAATCTCG
TCCTTACCTACAGTGGGTTATTGCTGAAGCGGAACTGGAGAGGAAGCTTC
AACCCAACACCTCAGGTTTAGATCTGCGAGACCACCTTAGCAAATTTCCA
GGCCTGACCATCTGGAGGGGCGCTGTTCCTATTTATCTTCCTATCAAAAT
GGAGAACCCGAAGTGGACGGTGCCTAGAGACGGTGGACGGAGCTATGATC
TTCTTGAAACCGTCCTTCAAGCGGCACAAGACCTGAAGGACTACAGGACA
GAGGCCTTATGCTTGGGTGAGCTAATCTATCGTTCAGTAAACACGAGCGA
AAGATTGACTCGGTTATCCCATCTCCAGAAGTCCATTCAGGGGGATATTG
TCGGCTATCGACAGACGTCCCTGTCGTGGTTCCTTCTTGCTGACACTGAA
CAAGACTACAAGCTTCTTCTAGACAGCTTGAAAAACATACAGGAACCGAA
ACGATCCCTAGGATTTCTCTATTCTCTGAGTGACTGGTGTGCAATTGTTA
TCGAACGAGCTATTTCACACTGCCTGGCGGAGGATGTATCGTCTTCTGAA
GAAGCTTTCCAAAACACCAAGGAGGGCTTCTCTATCTACCTCCCGCAATA
CATAAAAGACCAGTTAGAGGCGCTCGGTCTGAATAAGGTATACTTCGCAG
TCTCAAGGGTCGGAAAGCCCCAGGCACCTGACATACGACATCGCAATATC
ACAGACGTTCCGACAATGGAACAGTATACTCGACCCCACGATTCTTTTGA
GAGTTTGGGTGACGAGAGACATGGGCAGTCTGAGCCACTGCTCTCCTTTC
AGAGACGACCAGAGCGCACGTACACAGAAACTGTGAAAATCAATGATAGT
GATGATGATGACGATTATGATGATGATGATGATTCCGATGATGACGTTGG
CGAGTATACCACCGACAGCAGCTTCGACACAGCTAGATCAGATGATGGTT
GGGTGAATGGTGAGAGGGCTCATTTGACATCGCTCGTTCGTAGTACTTCA
CGATTTGGTCCAAATGCACAACATTTGGCAAAGGTCCTCCTCCACAAGAA
GGAGACGATCCAGAGATCGACAAGGCCTCTTTAACCGCTTTTCCTGGGAT
GAACGAGCGATTCATGGAAGGGCGCACGACGCCCTCGTTGTTCCTGAAAA
GAATGTCCATTCATCCCGTGCGGAGCCTGTACACTCTGGAGAAGCAATTG
TCGTTCGTAATACTGCAGCTCATAACAACGACACTAAGATTTCTTCACTA
GGCACACTCTCCAGAATACTGTCGGTATCACAGGATGGGCCACGAAACGA
TGGGTCTACCATCTGGACTCCCTCATCGACAAAAGATAAGACCATTCATT
ATGAGATGGACATCGTGGAGGATGTGGGAAGCCTGTTGGAGGAATTCTCG
CGACTCAAGAGACTAGGCCATTTCCAGGAAGCGGAACAATACTTTCAAGA
TTCCTTGAGTGCGTTTATGGAACTATCACCAGTTACAATTGAGTTCGCAG
ACATGCTAGTCGAACAAGGTTCGTACGAGCGTTTGCATCGCGTTCTGTCG
CAGCACCAACAGCAGGAGCTAGATACATTTGACAGTATCTCAAGCCTGCC
GGAGAACAACCGTGCCAGATTTCTATATCAAGCGAACTTGCACCTCATAC
AGCAATTCGCGGCCATGCAGTCCCACGGGTCGCTGGACGAGGCATATGTA
ACAGTCCGATCCTTGGAGCGCCAAATGCGTGTCCTAAGGCGACGTTGGAG
GAGGGACTCGACTCTTGATCTGGACTCGGCTGAAATTCGAGAAGCGCGAC
CGTTGAAGATGTCAGTAGTAGCATATATGAGGGATAAGTGCAAGTGATCC
GTTATGCGCTATTGATTCTATCGCAGGTTGAGCGTGAAACAAATTTGATT
GCAGAGCATGAGTTCAATTTCTGGTCTAACTGGCACTATCTGTACAGCGC
TCTCGTGACTGAAGGGCGAGTATGGGATGCGCGAGATCTAATACTCGCTT
CCATTCAGACGGAAGGTCCAGCAAATTCGTGGAACTTGATCTTCGAAGTA
GAACTTGATTCTCCCAAGGATGCGTTTCGCAAACTCATTGGCGACTGGGG
CTTGCATCGGTACGATGAGTCAACATATCTCGCCATTCTAGATATTCTAG
TGTGTCTGAGCCGCGGTTTGTCCTCATGGTCTATCTCGTTACCAGAGAGA
CAGGACTTGCTCACTGCTCAACGATGCCTCCAGTATGGGCAAGCCCTTGC
AACCTGCCTCAAGGAGAACAACCCGCAGCTGGTAAAATCTCGTCCTTACC
TACAGTGGGTTATTGCTGAAGCGGAACTGGAGAGGAAGCTTCAACCCAAC
ACCTCAGGTTTAGATCTGCGAGACCACCTTAGCAAATTTCCAGGCCTGAC
CATCTGGAGGGGCGCTGTTCCTATTTATCTTCCTATCAAAATGGAGAACC
CGAAGTGGACGGTGCCTAGAGACGGTGGACGGAGCTATGATCTTCTTGAA
ACCGTCCTTCAAGCGGCACAAGACCTGAAGGACTACAGGACAGAGGCCTT
ATGCTTGGGTGAGCTAATCTATCGTTCAGTAAACACGAGCGAAAGATTGA
CTCGGTTATCCCATCTCCAGAAGTCCATTCAGGGGGATATTGTCGGCTAT
CGACAGACGTCCCTGTCGTGGTTCCTTCTTGCTGACACTGAACAAGACTA
CAAGCTTCTTCTAGACAGCTTGAAAAACATACAGGAACCGAAACGATCCC
TAGGATTTCTCTATTCTCTGAGTGACTGGTGTGCAATTGTTATCGAACGA
GCTATTTCACACTGCCTGGCGGAGGATGTATCGTCTTCTGAAGAAGCTTT
CCAAAACACCAAGGAGGGCTTCTCTATCTACCTCCCGCAATACATAAAAG
ACCAGTTAGAGGCGCTCGGTCTGAATAAGGTATACTTCGCAGTCTCAAGG
GTCGGAAAGCCCCAGGCACCTGACATACGACATCGCAATATCACAGACGT
TCCGACAATGGAACAGTATACTCGACCCCACGATTCTTTTGAGAGTTTGG
GTGACGAGAGACATGGGCAGTCTGAGCCACTGCTCTCCTTTCAGAGACGA
CCAGAGCGCACGTACACAGAAACTGTGAAAATCAATGATAGTGATGATGA
TGACGATTATGATGATGATGATGATTCCGATGATGACGTTGGCGAGTATA
CCACCGACAGCAGCTTCGACACAGCTAGATCAGATGATGGTTGGGTGAAT
GGTGAGAGGGCTCATTTGACATCGCTCGTTCGTAGTACTTCACGATTTGG
TCCAAATGCACAACATTTGGCAAAGGTCCTCCTCCACAAGAAGGAGACGA
TCCAGAGATCGACAAGGCCTCTTTAACCGCTTTTCCTGGGATGAACGAGC
GATTCATGGAAGGGCGCACGACGCCCTCGTTGTTCCTGAAAAGAATGTCC
ATTCATCCCGTGCGGAGCCTGTACACTCTGGAGAAGCAATTGTCGTTCGT
AATACTGCAGCTCATAACAACGACACTAAGATTTCTTCACTAGGCACACT
CTCCAGAATACTGTCGGTATCACAGGATGGGCCACGAAACGATGGGTCTA
CCATCTGGACTCCCTCATCGACAAAAGATAAGACCATTCATTATGAGATG
GACATCGTGGAGGATGTGGGAAGCCTGTTGGAGGAATTCTCGCGACTCAA
GAGACTAGGCCATTTCCAGGAAGCGGAACAATACTTTCAAGATTCCTTGA
GTGCGTTTATGGAACTATCACCAGTTACAATTGAGTTCGCAGACATGCTA
GTCGAACAAGGTTCGTACGAGCGTTTGCATCGCGTTCTGTCGCAGCACCA
ACAGCAGGAGCTAGATACATTTGACAGTATCTCAAGCCTGCCGGAGAACA
ACCGTGCCAGATTTCTATATCAAGCGAACTTGCACCTCATACAGCAATTC
GCGGCCATGCAGTCCCACGGGTCGCTGGACGAGGCATATGTAACAGTCCG
ATCCTTGGAGCGCCAAATGCGTGTCCTAAGGCGACGTTGGAGGAGGGACT
CGACTCTTGATCTGGACTCGGCTGAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005879-T1.utr3p1 | KJC3_005879-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005879-T1.utr5p1 | KJC3_005879-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
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| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4008899..4011430 - |
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