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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4011653..4013241+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005880-T1 ID=KJC3_005880-T1|Name=KJC3_005880-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1589bp|location=Sequence derived from alignment at ch4:4011653..4013241+ (Aspergillus niger KJC3)
CCTAATAATGTCGAGGGCCACCAAGACTTCATCACCCACCGCTGGTCGGG
ACTCGCCGCCAACTTACTCACGACGGTATGGTCGGAAATATCTTGAGCTT
GACAACCTTCAGGATGCCAGCGTGTGCCACCGCAAGGTCGGCAAAGCACG
CGCTGACTGCCGACTTCGAACCTCCCAGTCGAAATGGGGATGCTTGGGTG
AAGCATCAAGGCCGGCGGGAATCGTCTACATGGATCTATCGTTTGATCAG
CCTATAGACTGTATGCTACTGAGTGCTACAGTCAAAATCACGTTGCAAGG
TGCCCCCCAGCACCAGCTTGACCTGGATAAGCCTGTACGCCTCCATCTGA
CCGACCACTACGGGCCTAAGTATCTCAGCGGAGATCCAAAGAATGTGGTC
AAGAAAACGATCTTGCATCTTGCGCCCCAGGTCAATGTACTGGGAAACGG
AGGCGGCGGTATCGGTATCGATAGCGAGAAGTCAATTACTTATGACAGCC
GATGGACATTCACAGGTAATCTGCGCCCTGCGCAAAAGACCGACCTGGAA
TATCGTACTATTAAGTGGGAGTTACGCGAGGAAGACCCTGAGTCTCAATC
AGTTCACAGCAATACGATCCACACTGCCTTTGCTTTCCAGCATGAGGGAA
GGCCCTTCCTCATGAGGATTGAGATCAAGGGAAAACTACAAAAGGGCAGG
AAGCGCTTCAAAGAAAGGGCTCGTCAATTGAGGTTCCCATCCCGTCATGA
GGGTGATGAGGGATCCAGTGATATTCTGGTGTATCCAAGCGTTTTGACGC
AGCCTTCAAGCCCTCGTTTAGATCGTCTTGCAGTGGATCTGCCCATGGTT
ATGGAAAGAGAGAACTGCCTTCGCATTCCAGTGCAGATCCCTACTGCATT
GCCAATATCGTTCACAGAGAGTAACGAAAACATTCCCGACAGAGCAGCGG
CAGACATTCAGAATATCCCAAACATGCTCGAAAACCCATATACGGGGAGC
CTACCGGGCATTTGGCCCGTTTTAGAGGACTCTGGACGCCACACTGAGAC
AGTGCGGTCATCTGGCTCCAACTCGTCTTTTTCCTCAGAAACGTTAGTAA
ACAGCATAGAGTCCTGCGGTGCAGACGATCCAATGGATGCGTGCATCTCA
AAACTTGGAGACGCTGTGCACACCTTTCAGGCCTCGCAAATTATTGGCCA
AGATGCATTACAGGCATCTGGGATTGTACAGCACGCAAATTCCATCTCGA
TGGTTCCAGTGAAACCGAACGGACCACCTGAACGGAGGCATGGCGAGAAA
GGAAGCGGTAGGACAGGCAGCCCTGAAGCAGCGCTGATGCTGTTATCGCG
CTATCCATCATTGATCATCTTAATCCAAATCCTCGCTGCTCTCCTGGATT
TCTTGCGGATGACAGCGAAGTCCGCACAGTTATCTGGTCGGGAAAGCGAT
AAAAAGGTCAGCGAGAGGGCCATAGCATATAGCAGCTGAACAAGCACGTT
GCGGAGACTCCATAACACCCTATGAGAGAAAAGGGTGGCGGTCATTTGAC
AAAGACTTCTTCCTCCAAAAGCCCGTAGACTAGTAGAGA back to topCoding sequence (CDS) from alignment at ch4:4011653..4013241+ >KJC3_005880-T1 ID=KJC3_005880-T1|Name=KJC3_005880-T1|organism=Aspergillus niger KJC3|type=CDS|length=1482bp|location=Sequence derived from alignment at ch4:4011653..4013241+ (Aspergillus niger KJC3)
ATGTCGAGGGCCACCAAGACTTCATCACCCACCGCTGGTCGGGACTCGCC
GCCAACTTACTCACGACGGTATGGTCGGAAATATCTTGAGCTTGACAACC
TTCAGGATGCCAGCGTGTGCCACCGCAAGGTCGGCAAAGCACGCGCTGAC
TGCCGACTTCGAACCTCCCAGTCGAAATGGGGATGCTTGGGTGAAGCATC
AAGGCCGGCGGGAATCGTCTACATGGATCTATCGTTTGATCAGCCTATAG
ACTGTATGCTACTGAGTGCTACAGTCAAAATCACGTTGCAAGGTGCCCCC
CAGCACCAGCTTGACCTGGATAAGCCTGTACGCCTCCATCTGACCGACCA
CTACGGGCCTAAGTATCTCAGCGGAGATCCAAAGAATGTGGTCAAGAAAA
CGATCTTGCATCTTGCGCCCCAGGTCAATGTACTGGGAAACGGAGGCGGC
GGTATCGGTATCGATAGCGAGAAGTCAATTACTTATGACAGCCGATGGAC
ATTCACAGGTAATCTGCGCCCTGCGCAAAAGACCGACCTGGAATATCGTA
CTATTAAGTGGGAGTTACGCGAGGAAGACCCTGAGTCTCAATCAGTTCAC
AGCAATACGATCCACACTGCCTTTGCTTTCCAGCATGAGGGAAGGCCCTT
CCTCATGAGGATTGAGATCAAGGGAAAACTACAAAAGGGCAGGAAGCGCT
TCAAAGAAAGGGCTCGTCAATTGAGGTTCCCATCCCGTCATGAGGGTGAT
GAGGGATCCAGTGATATTCTGGTGTATCCAAGCGTTTTGACGCAGCCTTC
AAGCCCTCGTTTAGATCGTCTTGCAGTGGATCTGCCCATGGTTATGGAAA
GAGAGAACTGCCTTCGCATTCCAGTGCAGATCCCTACTGCATTGCCAATA
TCGTTCACAGAGAGTAACGAAAACATTCCCGACAGAGCAGCGGCAGACAT
TCAGAATATCCCAAACATGCTCGAAAACCCATATACGGGGAGCCTACCGG
GCATTTGGCCCGTTTTAGAGGACTCTGGACGCCACACTGAGACAGTGCGG
TCATCTGGCTCCAACTCGTCTTTTTCCTCAGAAACGTTAGTAAACAGCAT
AGAGTCCTGCGGTGCAGACGATCCAATGGATGCGTGCATCTCAAAACTTG
GAGACGCTGTGCACACCTTTCAGGCCTCGCAAATTATTGGCCAAGATGCA
TTACAGGCATCTGGGATTGTACAGCACGCAAATTCCATCTCGATGGTTCC
AGTGAAACCGAACGGACCACCTGAACGGAGGCATGGCGAGAAAGGAAGCG
GTAGGACAGGCAGCCCTGAAGCAGCGCTGATGCTGTTATCGCGCTATCCA
TCATTGATCATCTTAATCCAAATCCTCGCTGCTCTCCTGGATTTCTTGCG
GATGACAGCGAAGTCCGCACAGTTATCTGGTCGGGAAAGCGATAAAAAGG
TCAGCGAGAGGGCCATAGCATATAGCAGCTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005880-T1.utr5p1 | KJC3_005880-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005880-T1.utr3p1 | KJC3_005880-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4011653..4013241 + |
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