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KJC3_005897-T1, KJC3_005897-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005897-T1
Unique NameKJC3_005897-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4064773..4066374-

Legend: exonfive_prime_UTRCDSpolypeptidethree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005897-T1 ID=KJC3_005897-T1|Name=KJC3_005897-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1602bp|location=Sequence derived from alignment at ch4:4064773..4066374- (Aspergillus niger KJC3)
CTCCTCACCAATGGCTCCACCAAGACCTCCCTACGTCTGCATCAATTGCA
GGCTGTTCGGCCGTCGTCCGTTCTCCTCGTCTACCCGACGAGCAGACATC
ATCCGCCCCGCGACGGCCCCCAAACCCACCCCCGACATCAAGCACATCCG
CCAAAACCCAGAGCTCTACTCCAAGAACTGCGTCGACCGCAATTATCCCG
CCCACGCAGAATACCCTCTCAAGATCCAGCAGCTGACCGACGAAGCGCGA
CGTCTCGACCAAGATCTCAAGACCCCTCGAGCCCGCATCAAGGAATTGGA
GAAAGCCATCGCCAAGGTCGCCAGTGCCGCCAACAATGACTCTTCCTCCG
ACCTGACCTCCCTCCGCGCCGAGGCCACTCGTCTCAAAGATGACTCCAAC
AACATGTCAACCCGGAAAACCACCTGCACCGAGGAAATCCACCGACTCGC
CCTATCCCTCCCCAACCTCTCCTCCACCTACACCCCCATCGGCGCCGACC
CAACCCTGATCAACTACATCAACTTCGACCCCCAATCACCCCCGGAATGG
GTGACACGCCCCGATCCAAACCGCTCCCACGTCACCATCGGCACCAAGCT
CGGTCTCCTCGACTTCACCAGCTCGGCCATCACCACCGGCTGGGGCTGGT
ACTTCCTGACCAACGAAGGCGCCCTCCTCGAACAAGCCCTCGTCCAATAC
GCCCTCAGCGTGGCCCGCCGCCACGGCTGGAAAGCCGTGTCACCTCCCTC
GCTCGTATACTCCTACATCGCCGAAGCCTGCGGCTTCCAGCCGCGCGACC
AGCACAACGAGCAACAGATCTGGACCATCGAGCAAACCGAAAAGGACAAG
TCCAAGCCCCAACGCTCCCTCGCCGGCACCGCCGAGATCCCTCTCGCAGC
CATGCACGCCGGCCGCGACATCCCCGCCAGTCAACTCCCCCTCCGTCTCG
TCGGCCCCAGCCGGTGCTACCGCGCCGAAGCCGGCTCCCGCGGCGTCGAC
ACCAAGGGTCTGTACCGTGTGCACGAATTCACCAAGGTCGAGATGTTCGC
CTGGGCGGATAACCTCCCTGACTCTACCAGTACCACATCCACCTCGGACG
ACCTCTTCGCAGAGCTCCTCTCCATCCAGACGGAGATCCTCACCGCGCTG
AACCTCCCCGCCCGTGTCCTGGAGATGCCCACCTCCGACTTGGGCGCCAG
CGCCAGCCGCAAACGCGATATCGAAGTCCTCTTCCCGTCGAGACTGCGTG
CCGGGGACCTTGAGTCTGGCTGGGGCGAGGTCACTTCCGCGTCTATCTGT
ACCGATTACCAGAGTCGTCGGCTGGGGACCCGTGTGCGTGGCGGAGCAGC
TAAGGAGTCGCGGTTCCCGCATACGGTGAATGGAACGGCGATGGCGGTTC
CTCGCGTGCTGGCTGCTATTCTGGAGATTGGATGGGATGCGGAGAGAGGA
GTGGTGGTTGTGCCGGAGGTGTTGAGGGGGTTTATGGGCGGGTTGGAGGT
TATTGGGGAGCAGTGAGCAGCGTGTTGTATAGATAGTGTGTGTGTATGTA
TGTATGTATGATAGGATGTTGAATGATGAATATATGTTTTTATATCGAGT
AG
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Coding sequence (CDS) from alignment at ch4:4064773..4066374-

>KJC3_005897-T1 ID=KJC3_005897-T1|Name=KJC3_005897-T1|organism=Aspergillus niger KJC3|type=CDS|length=1506bp|location=Sequence derived from alignment at ch4:4064773..4066374- (Aspergillus niger KJC3)
ATGGCTCCACCAAGACCTCCCTACGTCTGCATCAATTGCAGGCTGTTCGG
CCGTCGTCCGTTCTCCTCGTCTACCCGACGAGCAGACATCATCCGCCCCG
CGACGGCCCCCAAACCCACCCCCGACATCAAGCACATCCGCCAAAACCCA
GAGCTCTACTCCAAGAACTGCGTCGACCGCAATTATCCCGCCCACGCAGA
ATACCCTCTCAAGATCCAGCAGCTGACCGACGAAGCGCGACGTCTCGACC
AAGATCTCAAGACCCCTCGAGCCCGCATCAAGGAATTGGAGAAAGCCATC
GCCAAGGTCGCCAGTGCCGCCAACAATGACTCTTCCTCCGACCTGACCTC
CCTCCGCGCCGAGGCCACTCGTCTCAAAGATGACTCCAACAACATGTCAA
CCCGGAAAACCACCTGCACCGAGGAAATCCACCGACTCGCCCTATCCCTC
CCCAACCTCTCCTCCACCTACACCCCCATCGGCGCCGACCCAACCCTGAT
CAACTACATCAACTTCGACCCCCAATCACCCCCGGAATGGGTGACACGCC
CCGATCCAAACCGCTCCCACGTCACCATCGGCACCAAGCTCGGTCTCCTC
GACTTCACCAGCTCGGCCATCACCACCGGCTGGGGCTGGTACTTCCTGAC
CAACGAAGGCGCCCTCCTCGAACAAGCCCTCGTCCAATACGCCCTCAGCG
TGGCCCGCCGCCACGGCTGGAAAGCCGTGTCACCTCCCTCGCTCGTATAC
TCCTACATCGCCGAAGCCTGCGGCTTCCAGCCGCGCGACCAGCACAACGA
GCAACAGATCTGGACCATCGAGCAAACCGAAAAGGACAAGTCCAAGCCCC
AACGCTCCCTCGCCGGCACCGCCGAGATCCCTCTCGCAGCCATGCACGCC
GGCCGCGACATCCCCGCCAGTCAACTCCCCCTCCGTCTCGTCGGCCCCAG
CCGGTGCTACCGCGCCGAAGCCGGCTCCCGCGGCGTCGACACCAAGGGTC
TGTACCGTGTGCACGAATTCACCAAGGTCGAGATGTTCGCCTGGGCGGAT
AACCTCCCTGACTCTACCAGTACCACATCCACCTCGGACGACCTCTTCGC
AGAGCTCCTCTCCATCCAGACGGAGATCCTCACCGCGCTGAACCTCCCCG
CCCGTGTCCTGGAGATGCCCACCTCCGACTTGGGCGCCAGCGCCAGCCGC
AAACGCGATATCGAAGTCCTCTTCCCGTCGAGACTGCGTGCCGGGGACCT
TGAGTCTGGCTGGGGCGAGGTCACTTCCGCGTCTATCTGTACCGATTACC
AGAGTCGTCGGCTGGGGACCCGTGTGCGTGGCGGAGCAGCTAAGGAGTCG
CGGTTCCCGCATACGGTGAATGGAACGGCGATGGCGGTTCCTCGCGTGCT
GGCTGCTATTCTGGAGATTGGATGGGATGCGGAGAGAGGAGTGGTGGTTG
TGCCGGAGGTGTTGAGGGGGTTTATGGGCGGGTTGGAGGTTATTGGGGAG
CAGTGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006418tRNA aminoacylation for protein translation
GO:0006434seryl-tRNA aminoacylation
Vocabulary: Molecular Function
TermDefinition
GO:0004812aminoacyl-tRNA ligase activity
GO:0004828serine-tRNA ligase activity
GO:0005524ATP binding
GO:0000166nucleotide binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005897KJC3_005897Aspergillus niger KJC3gene


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005897-T1.cdsKJC3_005897-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005897-T1.utr3p1KJC3_005897-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005897-T1.exon1KJC3_005897-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005897-T1.utr5p1KJC3_005897-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005897-T1KJC3_005897-T1-proteinAspergillus niger KJC3polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010978
DBxrefInterPro:IPR006195
DBxrefInterPro:IPR042103
DBxrefInterPro:IPR002314
DBxrefInterPro:IPR015866
DBxrefInterPro:IPR002317
DBxrefPFAM:PF00587
DBxrefPFAM:PF02403
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4064773..4066374 -
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