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KJC3_005898-T1, KJC3_005898-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005898-T1
Unique NameKJC3_005898-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4066580..4067810-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005898-T1 ID=KJC3_005898-T1|Name=KJC3_005898-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1231bp|location=Sequence derived from alignment at ch4:4066580..4067810- (Aspergillus niger KJC3)
CTTGTCCCCATTTAAGGACCCGCTGCGCATCTCCCGTCGCTGATCTTCTC
TCCCTCATACTACTGTCTGCTATACTGCCATCTAGATAGTACTATCTAGT
AGTATCAACACACCATGGCTTCTGCTACGGGTATCCCCCAAGAACATCCC
GACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCATACCCCGGGAAA
TGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTCACAGGTG
AGTTGATTATTCCTCTGGGTAACGATGAAAATGTATCTTCTCCCAGCTAA
TGCTCGTTACATTATTAGGCACGGCCAGTGCAGCTCAAGTCGGAATCTGG
ATGGTAAGAAGATCCTTGTTGCTGCTCTTGTGTCTTACTGACTGAGTCCT
TGCTCAGCTGGCCATCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGA
TATTCTTCTCCGCTCATCCCGTAAGTCATCATCACCACATTCACTAGTTA
TTATTACCATCACGGCTATCCCAGTAAGTAGTGTTCCACAAACTAATTCC
TCATCAGCTCCTCAACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTC
TCATCCTCCAACCCACCACCACTCCTCACCAAAAGCGCCTCGGAACCATC
ATCCATTACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTT
CATCATCATCGAGATCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGC
ACGGCATCCTAGGTCTCATCACCTACATCTTCATTATCCTACAGGTCCTG
GTAGGTGTCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGA
GAAGGGCAAGAGCATCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGC
TGCTCTTGGAGCTGGCAACTGTCTCGGCGGCAACTCAGACTACCTACAAT
CTCAACGTGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTT
GGTTATCCTGGGGTTGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGT
AAGGGAATACCATGGCTCTGATGGTCATGATGTTATGGACCTTGATGCCG
TGGAATGACTTGAGAGGCTGTCCTGGTACTACCGTGGAATGGGTTATAGT
AACTATATGGCGGGGACTCAGTATAGTACTCGTAGCGGTCAACATGAGTA
ATGATACTTTCGAACATGCACATTGGATGAA
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Coding sequence (CDS) from alignment at ch4:4066580..4067810-

>KJC3_005898-T1 ID=KJC3_005898-T1|Name=KJC3_005898-T1|organism=Aspergillus niger KJC3|type=CDS|length=2904bp|location=Sequence derived from alignment at ch4:4066580..4067810- (Aspergillus niger KJC3)
CTCCTCAACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTCTCATCCT
CCAACCCACCACCACTCCTCACCAAAAGCGCCTCGGAACCATCATCCATT
ACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTTCATCATC
ATCGAGATCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGCACGGCAT
CCTAGGTCTCATCACCTACATCTTCATTATCCTACAGGTCCTGGTAGGTG
TCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGAGAAGGGC
AAGAGCATCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGCTGCTCTT
GGAGCTGGCAACTGTCTCGGCGGCAACTCAGACTACCTACAATCTCAACG
TGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTTGGTTATC
CTGGGGTTGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGTAACTGGC
CATCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGATATTCTTCTCCG
CTCATCCCGCACGGCCAGTGCAGCTCAAGTCGGAATCTGGATGATGGCTT
CTGCTACGGGTATCCCCCAAGAACATCCCGACACCATCCAGGAGCAGGAG
GATGCGCCCCTGCTGCATACCCCGGGAAATGTGCCCCAGAAAGAAAACGC
TGCTATCTACCAGAACCTCTTCACAGCTCCTCAACTCCGCTGCCATTCTG
CTTCAAGTCCAAGCCACTCTCATCCTCCAACCCACCACCACTCCTCACCA
AAAGCGCCTCGGAACCATCATCCATTACATCATCCAGACCCTCAGCCTCC
TCGGTTTCATCACTGCTTTCATCATCATCGAGATCAACAAGGGCGACCAT
GCTCGCTTCACCTCCCCGCACGGCATCCTAGGTCTCATCACCTACATCTT
CATTATCCTACAGGTCCTGGTAGGTGTCGTGCAGTATTTCGTCCCCGTCC
AGGTCTTGGGTAGTGTGGAGAAGGGCAAGAGCATCTACAAGTACCATCGC
AAGTCAGGCTACGTGTTGCTGCTCTTGGAGCTGGCAACTGTCTCGGCGGC
AACTCAGACTACCTACAATCTCAACGTGTTGAGTATTCCGTTGTGGGGAG
TATTGGTGGCCTCGGTCTTGGTTATCCTGGGGTTGGGAGCGAGGATCAAG
AAGCATAAGTTGGGGTTGTAACTGGCCATCCTCGTCTGGACGGGTATCTT
ATCTCACCCGTTGATATTCTTCTCCGCTCATCCCGCACGGCCAGTGCAGC
TCAAGTCGGAATCTGGATGATGGCTTCTGCTACGGGTATCCCCCAAGAAC
ATCCCGACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCATACCCCG
GGAAATGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTCAC
AGCTCCTCAACTCCGCTGCCATTCTGCTTCAAGTCCAAGCCACTCTCATC
CTCCAACCCACCACCACTCCTCACCAAAAGCGCCTCGGAACCATCATCCA
TTACATCATCCAGACCCTCAGCCTCCTCGGTTTCATCACTGCTTTCATCA
TCATCGAGATCAACAAGGGCGACCATGCTCGCTTCACCTCCCCGCACGGC
ATCCTAGGTCTCATCACCTACATCTTCATTATCCTACAGGTCCTGGTAGG
TGTCGTGCAGTATTTCGTCCCCGTCCAGGTCTTGGGTAGTGTGGAGAAGG
GCAAGAGCATCTACAAGTACCATCGCAAGTCAGGCTACGTGTTGCTGCTC
TTGGAGCTGGCAACTGTCTCGGCGGCAACTCAGACTACCTACAATCTCAA
CGTGTTGAGTATTCCGTTGTGGGGAGTATTGGTGGCCTCGGTCTTGGTTA
TCCTGGGGTTGGGAGCGAGGATCAAGAAGCATAAGTTGGGGTTGTAACTG
GCCATCCTCGTCTGGACGGGTATCTTATCTCACCCGTTGATATTCTTCTC
CGCTCATCCCGCACGGCCAGTGCAGCTCAAGTCGGAATCTGGATGATGGC
TTCTGCTACGGGTATCCCCCAAGAACATCCCGACACCATCCAGGAGCAGG
AGGATGCGCCCCTGCTGCATACCCCGGGAAATGTGCCCCAGAAAGAAAAC
GCTGCTATCTACCAGAACCTCTTCACAGCTCCTCAACTCCGCTGCCATTC
TGCTTCAAGTCCAAGCCACTCTCATCCTCCAACCCACCACCACTCCTCAC
CAAAAGCGCCTCGGAACCATCATCCATTACATCATCCAGACCCTCAGCCT
CCTCGGTTTCATCACTGCTTTCATCATCATCGAGATCAACAAGGGCGACC
ATGCTCGCTTCACCTCCCCGCACGGCATCCTAGGTCTCATCACCTACATC
TTCATTATCCTACAGGTCCTGGTAGGTGTCGTGCAGTATTTCGTCCCCGT
CCAGGTCTTGGGTAGTGTGGAGAAGGGCAAGAGCATCTACAAGTACCATC
GCAAGTCAGGCTACGTGTTGCTGCTCTTGGAGCTGGCAACTGTCTCGGCG
GCAACTCAGACTACCTACAATCTCAACGTGTTGAGTATTCCGTTGTGGGG
AGTATTGGTGGCCTCGGTCTTGGTTATCCTGGGGTTGGGAGCGAGGATCA
AGAAGCATAAGTTGGGGTTGTAACTGGCCATCCTCGTCTGGACGGGTATC
TTATCTCACCCGTTGATATTCTTCTCCGCTCATCCCGCACGGCCAGTGCA
GCTCAAGTCGGAATCTGGATGATGGCTTCTGCTACGGGTATCCCCCAAGA
ACATCCCGACACCATCCAGGAGCAGGAGGATGCGCCCCTGCTGCATACCC
CGGGAAATGTGCCCCAGAAAGAAAACGCTGCTATCTACCAGAACCTCTTC
ACAG
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005898KJC3_005898Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005898-T1KJC3_005898-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005898-T1.cdsKJC3_005898-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005898-T1.utr3p1KJC3_005898-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005898-T1.exon4KJC3_005898-T1.exon4Aspergillus niger KJC3exon
KJC3_005898-T1.exon3KJC3_005898-T1.exon3Aspergillus niger KJC3exon
KJC3_005898-T1.exon2KJC3_005898-T1.exon2Aspergillus niger KJC3exon
KJC3_005898-T1.exon1KJC3_005898-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005898-T1.utr5p1KJC3_005898-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR006593
DBxrefPFAM:PF03188
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4066580..4067810 -
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