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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4134938..4138532- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005917-T2 ID=KJC3_005917-T2|Name=KJC3_005917-T2|organism=Aspergillus niger KJC3|type=mRNA|length=3595bp|location=Sequence derived from alignment at ch4:4134938..4138532- (Aspergillus niger KJC3) TTACGTTCTCTCTTCTCCTCTCCCTGAACATCATCTCTCGTGCTCTCATC
CCCTCCCCTCGCCCAAATTATTCCCCACCTTCCATCCCACTTACCTTGGG
AAACAGAAACTATTCCAAAGGAGGCTGACCCTCCCGTGTGTCCCTGTCCT
ATTCCTCCTCCATGGAGCGAGAGCCAGAGCTTCTTTGCCCGACTCCCTCC
CCTCCCTTCTTTGTTGGTTCCTGACGTTATCGCACTTCCCACCCGCCATG
GACGCCTCCGGATCCCCCCGCGGGGCGTCGGACGACCTCGACCGCAGCGA
CCCCGATCTGGCCGACCACAGCGCGGCACGCAAGTCTTTACACGCTGCAG
GTCTCCCGGACGATCTCCCCAAGTCTTTGGACGACCGTCGTTCAGTCCCT
CTCATCCAACCCGAAACCGAGATGTATGATGCCTGGCAAGGTGCGTTACT
ACCTCTCCTTACTGGTCGCGCATGAAGAGGAGCCTACTGCGAGCGACTAC
ATGTGCATGTTTCCTTGGGAGCGCTCGGGGAACTACACGATCCGACAAAC
CCAGAAGCCCCGCGTGAGATCGAGTATAACGAGAAGTGTAACAGGTGGCT
GATCCGTGTCCGCTCCGCAGGCCAATCCCAATTTCTCACCACGCCCGTGG
CCGCAAAACCATTGAGCTTCAGTCTAGCCCTCGACGACCATATCCATGAC
GAAGAACATAATCTACAAGCCCAGTATGGGCGCGGACTGGCCGCATCGAC
TGACGACGATAACGAATCCACAACCACTGCTCGACTGGAGGACAGTGATG
CCCGGTTGATGGAAATGCTTGCTGCGCAGGCGGCTCACCGGGAGGTCGAG
TCGCTGGGTGCGGACGAGGAATCCATCGCAACAGACGAGAAGCTATCGGA
CGCAGAGAAGAAAGATATCTTACAGCGCAGCTTGAACATGGCGGCTAGTA
ATGGCGACGTGGAACGTGTTCGGAGATTAGTGCAAGGTCATGCAGCTGAA
TTTGTGGATGTGAATAATCCGGATGAAGAGGGGACGGTGCCGTTGATCTA
TGCTAGTTGCTTCGTACGTGCCGTCCTTCAGCCATTTTATCTGTTTGGGT
ATGCGCGAAGCTAACCTTCGTTGTAGGGACACCAGGATGTTGTCTCAGCG
CTTCTCGACGCGGGCGCCCATATCGATCAGCAGGACCGGAATCAGTGGAG
TGCCTTGATGTGGGCCATGACGAACAGACACAAGACAATCGCGAAGATCC
TTCTCGACCATGGCGCGTCTCCAGATATCAAATCCTCGTCGGGCGGGACG
GCGTTCGACTTTGCACAACCTGGTAGCGAGATTTCAGAGTATCTCCATGA
AAATGGTTATCACTTTGGGCCGAGTGCGATTGAAGACGACTTCTACGATT
CCGGGTTTGGGCACGGTCGCTTTGAGGAAGAGATTGCTGAGAATGAAATG
AAGCGGCGCATGATGATGGAGGAGAGCGCCATCAATCTTGAGGTGGACCT
ATCGAGCCTGGGGCTCGACGAGAAGTTTGACGTGAGTGGTTGAGTTGAAC
ATAGTGTCTCAGGCCAGCGCGCTAATCAGACCGTTTGTTGCCCATTATAG
TCGTTGGATGAAGAGGAACTCGAAGAAGAACAGCAAGAATTCGTGTGGGA
TCGGTGTCTGAACGATCAGATGTTCGTCTTCCAGGAGAGCGAGCTAGAGC
GGATCCTCAACATCATCATCACCAACATGACACCGCAACGGTCACCCTCG
CAGAAGCCCGTTCCCGCGAACCTCCTCTTTCTCAGTGCTCGATATGCGCA
CTATCATGCGAGTCCCGAATTGCTTGCCAAGCTGCTCGTTTCGGCGACCG
AGAAGATCAACGATGTCGTTGAGCGCCATCAGTGGGACATGACGATCCTA
GCTTTCTGGATGTCAAATGCGACGTTGTTGCTACATTACTTGAAAAAGGA
TGGCGGGCTGGTGGAAGCCACGGTGGAATTCCAGCTACACCTGGCCGAAT
TGATCAATGAAATCTTCATTCTCATCATCCGCGACGCCGAGCGTCGCATG
AACAAAGTGCTCGACGCCGCCATGCTGGACCATGAGACTATTCCGGGCCT
GGAGGACGTACACTTCCAAAACGAATGGAAGCTCTTCCGCTCCAAATCCA
AGAAAGCGCCCGAACCGGCAGAGAAGCGCTTCCGACCCCCATCACCCAGG
CGGCGCGCACAGGTCTCTCCGCGCAATATCACCTCTCTTCTCTCCTCTAC
GCTCTTTGTCCTCGATCTCTACGATGTACACTCCGTCATCACCACGCAGA
TTATCTCCCAGCTCCTGTACTGGCTTGGAGCTGAAACCTTTAACCGCATC
ATGTCGACCAAGCGCTACCTGGCCCGGACCAAGGCGATGCAGATTCGCAT
GAATGTGTCGACCCTAGAGGACTGGGCGCGAAACAACAACCGCCAACCGG
AGCATTATGAGAACGGATCGACTAGTAGCACGGGCGAGAGCACAATGGAG
TCTGCGCGCCGGCATTTGGCGCCAGTGATCCAGCTCCTACAGTGGCTCCA
GTGTTTCTCGTCGCTTGGGGACGATTTTGAGTCACTTGTTACGACTCTGC
TCCAGTTGCAGCAACTTACCCCGGCGCAACTCTTGCACGCAGTCAAGTCG
TATCGGCCCGAGGTCGGCGAGAAGGGGCTGACCAAGCCGGCCATGAAATT
CTTGATTGAGCTGCAGCGTGATCCGGGGCTGCTGTTCCGAGAACAAGCGA
AACTCCAGGCACCCAAGCCAACTACCACAGCACCCGAGGCAGGATCTACC
GATGGACGCCCTCAGACCCCTCCAGCCTCGACAGCTTCGGAGGCGGCCGG
ATCACCCTCCACACGAGCTTCGGTGGCATCGCCTGGCTCCAGCGTAGCGT
CTCCGCACCCGGGTCCGTCGGCGTGGATGGATGAGCGCAGTAACAATGTA
TTCCTGGACCCGTCCCTCACGCTTCCCTTCTCGCTGCCCACGAGCACAGA
TATGCTGATTAGTTACGGGGCGGGCTGGGGCGGCACGAACCGAGAACGCG
CGCGCAAGTATATACCGACGGTACCTCCGGAGGTGCTGAGTCGGTTCGAC
CGGGACCACTAAAGCGCATAAGGAAACAATGGGAGATGCGGAACTGGATA
CCCTGGCATTGCATTTCTAGTATATATATATAGCTTATATTCATCACTTC
CCTGATCTAGCGAGCATGTTTGGAAGCTGGACCTGAAAGATTTCCGCCCA
CCGGTCCTGGCTGGTTGGTGTACGTCGCTCAATTTGGTGTTACGTAGCGT
GTTTTCCCAGCGAAAGAAAAGGTAGAATCTAAGTAAACAAGAAGACCATG
AATCCCCAAGAAAGCGGGAATAGAACGATAGGAACAGCAAATAGCAGGAA
CAAATGACGGAGCGTCAGAGATAAAAAAGAAACCCCGCCCAGCCCACAAG
CGAAGAAGATAACGATGAGCAGAAATGTTTCCCCAACGGGGGCTCGGGAG
ATGAAACGCCAGAGGGCGGGCAAATGATATCTAATCATCTATCTGGTTAG
TCCTGTACTCAGTCAGTAGAAGGTTAGTTCCTAACTAGACCAGTT back to topCoding sequence (CDS) from alignment at ch4:4134938..4138532- >KJC3_005917-T2 ID=KJC3_005917-T2|Name=KJC3_005917-T2|organism=Aspergillus niger KJC3|type=CDS|length=6516bp|location=Sequence derived from alignment at ch4:4134938..4138532- (Aspergillus niger KJC3) TCGTTGGATGAAGAGGAACTCGAAGAAGAACAGCAAGAATTCGTGTGGGA TCGGTGTCTGAACGATCAGATGTTCGTCTTCCAGGAGAGCGAGCTAGAGC GGATCCTCAACATCATCATCACCAACATGACACCGCAACGGTCACCCTCG CAGAAGCCCGTTCCCGCGAACCTCCTCTTTCTCAGTGCTCGATATGCGCA CTATCATGCGAGTCCCGAATTGCTTGCCAAGCTGCTCGTTTCGGCGACCG AGAAGATCAACGATGTCGTTGAGCGCCATCAGTGGGACATGACGATCCTA GCTTTCTGGATGTCAAATGCGACGTTGTTGCTACATTACTTGAAAAAGGA TGGCGGGCTGGTGGAAGCCACGGTGGAATTCCAGCTACACCTGGCCGAAT TGATCAATGAAATCTTCATTCTCATCATCCGCGACGCCGAGCGTCGCATG AACAAAGTGCTCGACGCCGCCATGCTGGACCATGAGACTATTCCGGGCCT GGAGGACGTACACTTCCAAAACGAATGGAAGCTCTTCCGCTCCAAATCCA AGAAAGCGCCCGAACCGGCAGAGAAGCGCTTCCGACCCCCATCACCCAGG CGGCGCGCACAGGTCTCTCCGCGCAATATCACCTCTCTTCTCTCCTCTAC GCTCTTTGTCCTCGATCTCTACGATGTACACTCCGTCATCACCACGCAGA TTATCTCCCAGCTCCTGTACTGGCTTGGAGCTGAAACCTTTAACCGCATC ATGTCGACCAAGCGCTACCTGGCCCGGACCAAGGCGATGCAGATTCGCAT GAATGTGTCGACCCTAGAGGACTGGGCGCGAAACAACAACCGCCAACCGG AGCATTATGAGAACGGATCGACTAGTAGCACGGGCGAGAGCACAATGGAG TCTGCGCGCCGGCATTTGGCGCCAGTGATCCAGCTCCTACAGTGGCTCCA GTGTTTCTCGTCGCTTGGGGACGATTTTGAGTCACTTGTTACGACTCTGC TCCAGTTGCAGCAACTTACCCCGGCGCAACTCTTGCACGCAGTCAAGTCG TATCGGCCCGAGGTCGGCGAGAAGGGGCTGACCAAGCCGGCCATGAAATT CTTGATTGAGCTGCAGCGTGATCCGGGGCTGCTGTTCCGAGAACAAGCGA AACTCCAGGCACCCAAGCCAACTACCACAGCACCCGAGGCAGGATCTACC GATGGACGCCCTCAGACCCCTCCAGCCTCGACAGCTTCGGAGGCGGCCGG ATCACCCTCCACACGAGCTTCGGTGGCATCGCCTGGCTCCAGCGTAGCGT CTCCGCACCCGGGTCCGTCGGCGTGGATGGATGAGCGCAGTAACAATGTA TTCCTGGACCCGTCCCTCACGCTTCCCTTCTCGCTGCCCACGAGCACAGA TATGCTGATTAGTTACGGGGCGGGCTGGGGCGGCACGAACCGAGAACGCG CGCGCAAGTATATACCGACGGTACCTCCGGAGGTGCTGAGTCGGTTCGAC CGGGACCACTAAGGACACCAGGATGTTGTCTCAGCGCTTCTCGACGCGGG CGCCCATATCGATCAGCAGGACCGGAATCAGTGGAGTGCCTTGATGTGGG CCATGACGAACAGACACAAGACAATCGCGAAGATCCTTCTCGACCATGGC GCGTCTCCAGATATCAAATCCTCGTCGGGCGGGACGGCGTTCGACTTTGC ACAACCTGGTAGCGAGATTTCAGAGTATCTCCATGAAAATGGTTATCACT TTGGGCCGAGTGCGATTGAAGACGACTTCTACGATTCCGGGTTTGGGCAC GGTCGCTTTGAGGAAGAGATTGCTGAGAATGAAATGAAGCGGCGCATGAT GATGGAGGAGAGCGCCATCAATCTTGAGGTGGACCTATCGAGCCTGGGGC TCGACGAGAAGTTTGACATGGAAATGCTTGCTGCGCAGGCGGCTCACCGG GAGGTCGAGTCGCTGGGTGCGGACGAGGAATCCATCGCAACAGACGAGAA GCTATCGGACGCAGAGAAGAAAGATATCTTACAGCGCAGCTTGAACATGG CGGCTAGTAATGGCGACGTGGAACGTGTTCGGAGATTAGTGCAAGGTCAT GCAGCTGAATTTGTGGATGTGAATAATCCGGATGAAGAGGGGACGGTGCC GTTGATCTATGCTAGTTGCTTCTCGTTGGATGAAGAGGAACTCGAAGAAG AACAGCAAGAATTCGTGTGGGATCGGTGTCTGAACGATCAGATGTTCGTC TTCCAGGAGAGCGAGCTAGAGCGGATCCTCAACATCATCATCACCAACAT GACACCGCAACGGTCACCCTCGCAGAAGCCCGTTCCCGCGAACCTCCTCT TTCTCAGTGCTCGATATGCGCACTATCATGCGAGTCCCGAATTGCTTGCC AAGCTGCTCGTTTCGGCGACCGAGAAGATCAACGATGTCGTTGAGCGCCA TCAGTGGGACATGACGATCCTAGCTTTCTGGATGTCAAATGCGACGTTGT TGCTACATTACTTGAAAAAGGATGGCGGGCTGGTGGAAGCCACGGTGGAA TTCCAGCTACACCTGGCCGAATTGATCAATGAAATCTTCATTCTCATCAT CCGCGACGCCGAGCGTCGCATGAACAAAGTGCTCGACGCCGCCATGCTGG ACCATGAGACTATTCCGGGCCTGGAGGACGTACACTTCCAAAACGAATGG AAGCTCTTCCGCTCCAAATCCAAGAAAGCGCCCGAACCGGCAGAGAAGCG CTTCCGACCCCCATCACCCAGGCGGCGCGCACAGGTCTCTCCGCGCAATA TCACCTCTCTTCTCTCCTCTACGCTCTTTGTCCTCGATCTCTACGATGTA CACTCCGTCATCACCACGCAGATTATCTCCCAGCTCCTGTACTGGCTTGG AGCTGAAACCTTTAACCGCATCATGTCGACCAAGCGCTACCTGGCCCGGA CCAAGGCGATGCAGATTCGCATGAATGTGTCGACCCTAGAGGACTGGGCG CGAAACAACAACCGCCAACCGGAGCATTATGAGAACGGATCGACTAGTAG CACGGGCGAGAGCACAATGGAGTCTGCGCGCCGGCATTTGGCGCCAGTGA TCCAGCTCCTACAGTGGCTCCAGTGTTTCTCGTCGCTTGGGGACGATTTT GAGTCACTTGTTACGACTCTGCTCCAGTTGCAGCAACTTACCCCGGCGCA ACTCTTGCACGCAGTCAAGTCGTATCGGCCCGAGGTCGGCGAGAAGGGGC TGACCAAGCCGGCCATGAAATTCTTGATTGAGCTGCAGCGTGATCCGGGG CTGCTGTTCCGAGAACAAGCGAAACTCCAGGCACCCAAGCCAACTACCAC AGCACCCGAGGCAGGATCTACCGATGGACGCCCTCAGACCCCTCCAGCCT CGACAGCTTCGGAGGCGGCCGGATCACCCTCCACACGAGCTTCGGTGGCA TCGCCTGGCTCCAGCGTAGCGTCTCCGCACCCGGGTCCGTCGGCGTGGAT GGATGAGCGCAGTAACAATGTATTCCTGGACCCGTCCCTCACGCTTCCCT TCTCGCTGCCCACGAGCACAGATATGCTGATTAGTTACGGGGCGGGCTGG GGCGGCACGAACCGAGAACGCGCGCGCAAGTATATACCGACGGTACCTCC GGAGGTGCTGAGTCGGTTCGACCGGGACCACTAAGGACACCAGGATGTTG TCTCAGCGCTTCTCGACGCGGGCGCCCATATCGATCAGCAGGACCGGAAT CAGTGGAGTGCCTTGATGTGGGCCATGACGAACAGACACAAGACAATCGC GAAGATCCTTCTCGACCATGGCGCGTCTCCAGATATCAAATCCTCGTCGG GCGGGACGGCGTTCGACTTTGCACAACCTGGTAGCGAGATTTCAGAGTAT CTCCATGAAAATGGTTATCACTTTGGGCCGAGTGCGATTGAAGACGACTT CTACGATTCCGGGTTTGGGCACGGTCGCTTTGAGGAAGAGATTGCTGAGA ATGAAATGAAGCGGCGCATGATGATGGAGGAGAGCGCCATCAATCTTGAG GTGGACCTATCGAGCCTGGGGCTCGACGAGAAGTTTGACATGGAAATGCT TGCTGCGCAGGCGGCTCACCGGGAGGTCGAGTCGCTGGGTGCGGACGAGG AATCCATCGCAACAGACGAGAAGCTATCGGACGCAGAGAAGAAAGATATC TTACAGCGCAGCTTGAACATGGCGGCTAGTAATGGCGACGTGGAACGTGT TCGGAGATTAGTGCAAGGTCATGCAGCTGAATTTGTGGATGTGAATAATC CGGATGAAGAGGGGACGGTGCCGTTGATCTATGCTAGTTGCTTCTCGTTG GATGAAGAGGAACTCGAAGAAGAACAGCAAGAATTCGTGTGGGATCGGTG TCTGAACGATCAGATGTTCGTCTTCCAGGAGAGCGAGCTAGAGCGGATCC TCAACATCATCATCACCAACATGACACCGCAACGGTCACCCTCGCAGAAG CCCGTTCCCGCGAACCTCCTCTTTCTCAGTGCTCGATATGCGCACTATCA TGCGAGTCCCGAATTGCTTGCCAAGCTGCTCGTTTCGGCGACCGAGAAGA TCAACGATGTCGTTGAGCGCCATCAGTGGGACATGACGATCCTAGCTTTC TGGATGTCAAATGCGACGTTGTTGCTACATTACTTGAAAAAGGATGGCGG GCTGGTGGAAGCCACGGTGGAATTCCAGCTACACCTGGCCGAATTGATCA ATGAAATCTTCATTCTCATCATCCGCGACGCCGAGCGTCGCATGAACAAA GTGCTCGACGCCGCCATGCTGGACCATGAGACTATTCCGGGCCTGGAGGA CGTACACTTCCAAAACGAATGGAAGCTCTTCCGCTCCAAATCCAAGAAAG CGCCCGAACCGGCAGAGAAGCGCTTCCGACCCCCATCACCCAGGCGGCGC GCACAGGTCTCTCCGCGCAATATCACCTCTCTTCTCTCCTCTACGCTCTT TGTCCTCGATCTCTACGATGTACACTCCGTCATCACCACGCAGATTATCT CCCAGCTCCTGTACTGGCTTGGAGCTGAAACCTTTAACCGCATCATGTCG ACCAAGCGCTACCTGGCCCGGACCAAGGCGATGCAGATTCGCATGAATGT GTCGACCCTAGAGGACTGGGCGCGAAACAACAACCGCCAACCGGAGCATT ATGAGAACGGATCGACTAGTAGCACGGGCGAGAGCACAATGGAGTCTGCG CGCCGGCATTTGGCGCCAGTGATCCAGCTCCTACAGTGGCTCCAGTGTTT CTCGTCGCTTGGGGACGATTTTGAGTCACTTGTTACGACTCTGCTCCAGT TGCAGCAACTTACCCCGGCGCAACTCTTGCACGCAGTCAAGTCGTATCGG CCCGAGGTCGGCGAGAAGGGGCTGACCAAGCCGGCCATGAAATTCTTGAT TGAGCTGCAGCGTGATCCGGGGCTGCTGTTCCGAGAACAAGCGAAACTCC AGGCACCCAAGCCAACTACCACAGCACCCGAGGCAGGATCTACCGATGGA CGCCCTCAGACCCCTCCAGCCTCGACAGCTTCGGAGGCGGCCGGATCACC CTCCACACGAGCTTCGGTGGCATCGCCTGGCTCCAGCGTAGCGTCTCCGC ACCCGGGTCCGTCGGCGTGGATGGATGAGCGCAGTAACAATGTATTCCTG GACCCGTCCCTCACGCTTCCCTTCTCGCTGCCCACGAGCACAGATATGCT GATTAGTTACGGGGCGGGCTGGGGCGGCACGAACCGAGAACGCGCGCGCA AGTATATACCGACGGTACCTCCGGAGGTGCTGAGTCGGTTCGACCGGGAC CACTAAGGACACCAGGATGTTGTCTCAGCGCTTCTCGACGCGGGCGCCCA TATCGATCAGCAGGACCGGAATCAGTGGAGTGCCTTGATGTGGGCCATGA CGAACAGACACAAGACAATCGCGAAGATCCTTCTCGACCATGGCGCGTCT CCAGATATCAAATCCTCGTCGGGCGGGACGGCGTTCGACTTTGCACAACC TGGTAGCGAGATTTCAGAGTATCTCCATGAAAATGGTTATCACTTTGGGC CGAGTGCGATTGAAGACGACTTCTACGATTCCGGGTTTGGGCACGGTCGC TTTGAGGAAGAGATTGCTGAGAATGAAATGAAGCGGCGCATGATGATGGA GGAGAGCGCCATCAATCTTGAGGTGGACCTATCGAGCCTGGGGCTCGACG AGAAGTTTGACATGGAAATGCTTGCTGCGCAGGCGGCTCACCGGGAGGTC GAGTCGCTGGGTGCGGACGAGGAATCCATCGCAACAGACGAGAAGCTATC GGACGCAGAGAAGAAAGATATCTTACAGCGCAGCTTGAACATGGCGGCTA GTAATGGCGACGTGGAACGTGTTCGGAGATTAGTGCAAGGTCATGCAGCT GAATTTGTGGATGTGAATAATCCGGATGAAGAGGGGACGGTGCCGTTGAT CTATGCTAGTTGCTTC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_005917-T2.utr3p1 | KJC3_005917-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_005917-T2.utr5p1 | KJC3_005917-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR037986 |
DBxref | InterPro:IPR036770 |
DBxref | InterPro:IPR020683 |
DBxref | InterPro:IPR002710 |
DBxref | InterPro:IPR002110 |
DBxref | PFAM:PF01843 |
DBxref | PFAM:PF13857 |
DBxref | PFAM:PF13637 |
DBxref | PFAM:PF12796 |
DBxref | PFAM:PF00023 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:4134938..4138532 - |
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