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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4159571..4161027- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005924-T1 ID=KJC3_005924-T1|Name=KJC3_005924-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1457bp|location=Sequence derived from alignment at ch4:4159571..4161027- (Aspergillus niger KJC3)
CCTGCATCTAGATTTGGCCCCCAAGTCTGCCTGAAACGCTTTGCTTCCGT
CTCGTCCCTGAGGTGGTAATATTTATTTAACTCGTTTCTGAAAGCCGGCT
CGCAATTGCTCTGACATGATTCGAGACTATCGTCAGACTCAGTGTCACCC
TCCCTCCCCTCTATCGGTTGAACCAATATGGCTACTTCCAGCACTGCTGG
CGAGGTAGATGCCTTGCTCAGCGACCACTCCACATCAAATCGCGGACCCG
AGATGCTGGGAGCATGTATTACTAGCATGATCTTCTGTGTCATAGGGTTG
AGCATCCGTGTGTGGGCACAATCGCTCATTCACAGGATCTGGACGGCAGA
TTGTATTCTCATCATTCTCGCGGCCATTTTCACCCTGGCGACCGCGGGCT
GTGTGATTGCCGCAGTGGCTAGCGGCATGGGTCAGCATGCAGTAAGAGGC
CCCAGCATCTCCTCTTCTCTCCCGCCTAGTTTTCTGGCGGGGGAATCATG
CCGTTTGATGGGAATCTGATTTTGGATAGTACTGGGTCATCAGCGAAGAC
CCGCATCCTCCAGAGCGAATGGCATTTGTAGTGGAGATGTCGTACATCAT
AACGATAATCCAAGCCCCCGCACTCATGTTCACCAAGTTGTCAGTCTTAG
TGTTTTACCAACGGGCCTTCTCGACCATTGTTCGAGGGGTTCGCTGGACC
ATCTGGGGGCTCTTTGCCTTCTGTCTTGGCTTGGGAGTCGCCTCGACGAT
CGTCTTCGTCTGTGCCTGCTTGCCACCACAGATGTTCTGGCTTCGTGTCT
ACCCCATCTTCGGCTACGAGGCGCCTCAGCCCCTGGAAGATTATACGTGC
ATGCCTCAAAGGACCCATCTGTGTATTCCGCTTCTGCTTGATTTGTTTTC
CGAACTAATTCTGCTCGGTATTCCGGCGGTGGTCTTGTGGAACCTCCAGA
TGGCCCTCCGCCGGAAAATCATCATCATCTTCACCTTCTCACTTGGATTG
TTTGTTACGGCGATTTCAGCCGTGCGCTTCTACTATGCCTGGACCATGGT
ACTTGGGGGCGATATGACATGGGCAGATACAGACACCTGCATTTGGACCA
CAGTGCAGCTCTGCTTCGGTATCGTGACCGCATGCATCCCCGCCTCGGCT
CCCTTGTTGCGACTCCGCCAAACTCCCAACCCCCGCCCATGGAACAAGCA
GGGAGGATACATGCTATCGATTAACTACGCATCCAACAGTAGAAAGCGGA
AGGACATGGGGACGGAAAGCATGCTGGACCTTCAGAGAAGCCCCGAGGAT
GATGTGGAGGACTCTGCGACCCGAGGCACGAGTTGGGAAACACCGCCATC
ACACGAATTACGAAAGATTGAGGTGGTCCGGAAGGTGGAGATCCATCATG
GTCCGTGAGAGGGAGGAGCAAAAGGTGGGTTGGGTGCGGACGGAAAGGAG
ATGAGGG back to topCoding sequence (CDS) from alignment at ch4:4159571..4161027- >KJC3_005924-T1 ID=KJC3_005924-T1|Name=KJC3_005924-T1|organism=Aspergillus niger KJC3|type=CDS|length=2286bp|location=Sequence derived from alignment at ch4:4159571..4161027- (Aspergillus niger KJC3)
TACTGGGTCATCAGCGAAGACCCGCATCCTCCAGAGCGAATGGCATTTGT
AGTGGAGATGTCGTACATCATAACGATAATCCAAGCCCCCGCACTCATGT
TCACCAAGTTGTCAGTCTTAGTGTTTTACCAACGGGCCTTCTCGACCATT
GTTCGAGGGGTTCGCTGGACCATCTGGGGGCTCTTTGCCTTCTGTCTTGG
CTTGGGAGTCGCCTCGACGATCGTCTTCGTCTGTGCCTGCTTGCCACCAC
AGATGTTCTGGCTTCGTGTCTACCCCATCTTCGGCTACGAGGCGCCTCAG
CCCCTGGAAGATTATACGTGCATGCCTCAAAGGACCCATCTGTGTATTCC
GCTTCTGCTTGATTTGTTTTCCGAACTAATTCTGCTCGGTATTCCGGCGG
TGGTCTTGTGGAACCTCCAGATGGCCCTCCGCCGGAAAATCATCATCATC
TTCACCTTCTCACTTGGATTGTTTGTTACGGCGATTTCAGCCGTGCGCTT
CTACTATGCCTGGACCATGGTACTTGGGGGCGATATGACATGGGCAGATA
CAGACACCTGCATTTGGACCACAGTGCAGCTCTGCTTCGGTATCGTGACC
GCATGCATCCCCGCCTCGGCTCCCTTGTTGCGACTCCGCCAAACTCCCAA
CCCCCGCCCATGGAACAAGCAGGGAGGATACATGCTATCGATTAACTACG
CATCCAACAGTAGAAAGCGGAAGGACATGGGGACGGAAAGCATGCTGGAC
CTTCAGAGAAGCCCCGAGGATGATGTGGAGGACTCTGCGACCCGAGGCAC
GAGTTGGGAAACACCGCCATCACACGAATTACGAAAGATTGAGGTGGTCC
GGAAGGTGGAGATCCATCATGGTCCGTGAATGGCTACTTCCAGCACTGCT
GGCGAGGTAGATGCCTTGCTCAGCGACCACTCCACATCAAATCGCGGACC
CGAGATGCTGGGAGCATGTATTACTAGCATGATCTTCTGTGTCATAGGGT
TGAGCATCCGTGTGTGGGCACAATCGCTCATTCACAGGATCTGGACGGCA
GATTGTATTCTCATCATTCTCGCGGCCATTTTCACCCTGGCGACCGCGGG
CTGTGTGATTGCCGCAGTGGCTAGCGGCATGGGTCAGCATGCATACTGGG
TCATCAGCGAAGACCCGCATCCTCCAGAGCGAATGGCATTTGTAGTGGAG
ATGTCGTACATCATAACGATAATCCAAGCCCCCGCACTCATGTTCACCAA
GTTGTCAGTCTTAGTGTTTTACCAACGGGCCTTCTCGACCATTGTTCGAG
GGGTTCGCTGGACCATCTGGGGGCTCTTTGCCTTCTGTCTTGGCTTGGGA
GTCGCCTCGACGATCGTCTTCGTCTGTGCCTGCTTGCCACCACAGATGTT
CTGGCTTCGTGTCTACCCCATCTTCGGCTACGAGGCGCCTCAGCCCCTGG
AAGATTATACGTGCATGCCTCAAAGGACCCATCTGTGTATTCCGCTTCTG
CTTGATTTGTTTTCCGAACTAATTCTGCTCGGTATTCCGGCGGTGGTCTT
GTGGAACCTCCAGATGGCCCTCCGCCGGAAAATCATCATCATCTTCACCT
TCTCACTTGGATTGTTTGTTACGGCGATTTCAGCCGTGCGCTTCTACTAT
GCCTGGACCATGGTACTTGGGGGCGATATGACATGGGCAGATACAGACAC
CTGCATTTGGACCACAGTGCAGCTCTGCTTCGGTATCGTGACCGCATGCA
TCCCCGCCTCGGCTCCCTTGTTGCGACTCCGCCAAACTCCCAACCCCCGC
CCATGGAACAAGCAGGGAGGATACATGCTATCGATTAACTACGCATCCAA
CAGTAGAAAGCGGAAGGACATGGGGACGGAAAGCATGCTGGACCTTCAGA
GAAGCCCCGAGGATGATGTGGAGGACTCTGCGACCCGAGGCACGAGTTGG
GAAACACCGCCATCACACGAATTACGAAAGATTGAGGTGGTCCGGAAGGT
GGAGATCCATCATGGTCCGTGAATGGCTACTTCCAGCACTGCTGGCGAGG
TAGATGCCTTGCTCAGCGACCACTCCACATCAAATCGCGGACCCGAGATG
CTGGGAGCATGTATTACTAGCATGATCTTCTGTGTCATAGGGTTGAGCAT
CCGTGTGTGGGCACAATCGCTCATTCACAGGATCTGGACGGCAGATTGTA
TTCTCATCATTCTCGCGGCCATTTTCACCCTGGCGACCGCGGGCTGTGTG
ATTGCCGCAGTGGCTAGCGGCATGGGTCAGCATGCA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005924-T1.utr3p1 | KJC3_005924-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005924-T1.utr5p1 | KJC3_005924-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_4.10 |
| Note | antiSMASH:Cluster_4.9 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4159571..4161027 - |
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