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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4228036..4229481+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005949-T1 ID=KJC3_005949-T1|Name=KJC3_005949-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1446bp|location=Sequence derived from alignment at ch4:4228036..4229481+ (Aspergillus niger KJC3)
TGCATCGGATATTAACTGATGTGCTACTCCTATCCCCGATAAACTCCTTA
AATCCGTGCGAAGCATTTCACTTCCCTCCATATATGAGGCCTCCCAGACC
TCGCTGCGCTGTTTCGAATTCGATACTCATCCTTCATAACCTTTCACTAC
CTATAGCAATCTACCATGGTCGGATTAGACGACGTGCATGCCTCTAACAC
TGCCCTAGTTCAGCGCCAGCCATTGGTTGCTGTTTTCTTTGGCGGTACCT
CAGGCATTGGTCACTATACCCTGCGTGCCTTGGCCACGGCGGAAGCCAAG
GGTGGCAAAGGCTTCCGTGCATATATCGTTGGCAGAAATATCAAAGCCGC
TGAAGAAATTATCGCAGAATGTCGTGGCATTTGTCCCAACGCCCAGATCA
GATTCTTGCAAACTGAGGATATTTCCCTAATTCAGAACGTTAATCGCGTC
TGCGAAGAGGTCATTCAGATGGAAGAAAAGGAGCAAGAAGATCCAAGGAT
AGATTATCTCATGCTAAGTCAGGGAGGGCCTATCTTTCAGCCACGGAAAG
GTGCGCCTAATACTATCTGATATGTCTGCACTTCTGACGGTTTCGCAGAC
ACCAAAGAAGGTATCGACGTCACGATGTCTTTGATGTACTATTCTCGAAT
GAGAGCAATAACAAAGCTCCTTCCATTGCTACTCAAGTCGACTCTCCCCG
CAACAGTCGTTTCGGTCTTTGCAGCAGGCTACGAGCAAAAGTTATTTCCC
GACGATCTCTCTTTGCGCGATCTAAATAACTATAACTATTTGACTGCTCG
CTCACATATGATATACATGCATGTATGCTTCATGGAAGCTTTGGCTGAGC
AGAACCGAGGGAAGCTTAGTCTGATTCACATCTTCCCTGGCCTCGTGTTA
GGGCCCGGGTTTGAAAAACATGATTTGCCCGTTTGGTTTAGGGTGCTGTG
GCGTTACATTTTTGTTCCCTTCTTTGCACCGTTCCTTACTATTCCACCAT
CTGAGAGTGGTGACAGAATGTTGAGCCTTGCATCGTCTCGTTATCCGCCA
CGAGGAGCAAGTTCGTCGCAGAACCAAGGGGAGACTACTATGGGGACGGA
TGGTAAGCTTGGAAGCGGTGTATACTCCCTTGGTAAAACGGGAGATACCA
ACTACAACGCCAAGTACTATGAGAAGATCGACAAGGACCAACTAAGGCAG
AAGGTGTGGGATCACACTATGAGCGCTTTTGGGACTATCGAGGCAGGGGA
AGTTTTTGCGGATTGAATCCTTGGCGGGAGGGGGTCTCGTGAATGGTTTA
GGGAATGAATTGTTTTATTAAACTTTGACTGTTGGGCTCAGATTGTAGCA
ATTTGCGGAGACTAATCCGCCGTTGCGATTTAGATGATTTGAGCTTCACT
GGAGTTCGGTAAATACAATCTGCGGCTATCTGGCTTAAGTTAGGAC back to topCoding sequence (CDS) from alignment at ch4:4228036..4229481+ >KJC3_005949-T1 ID=KJC3_005949-T1|Name=KJC3_005949-T1|organism=Aspergillus niger KJC3|type=CDS|length=2106bp|location=Sequence derived from alignment at ch4:4228036..4229481+ (Aspergillus niger KJC3)
ATGGTCGGATTAGACGACGTGCATGCCTCTAACACTGCCCTAGTTCAGCG
CCAGCCATTGGTTGCTGTTTTCTTTGGCGGTACCTCAGGCATTGGTCACT
ATACCCTGCGTGCCTTGGCCACGGCGGAAGCCAAGGGTGGCAAAGGCTTC
CGTGCATATATCGTTGGCAGAAATATCAAAGCCGCTGAAGAAATTATCGC
AGAATGTCGTGGCATTTGTCCCAACGCCCAGATCAGATTCTTGCAAACTG
AGGATATTTCCCTAATTCAGAACGTTAATCGCGTCTGCGAAGAGGTCATT
CAGATGGAAGAAAAGGAGCAAGAAGATCCAAGGATAGATTATCTCATGCT
AAGTCAGGGAGGGCCTATCTTTCAGCCACGGAAAGACACCAAAGAAGGTA
TCGACGTCACGATGTCTTTGATGTACTATTCTCGAATGAGAGCAATAACA
AAGCTCCTTCCATTGCTACTCAAGTCGACTCTCCCCGCAACAGTCGTTTC
GGTCTTTGCAGCAGGCTACGAGCAAAAGTTATTTCCCGACGATCTCTCTT
TGCGCGATCTAAATAACTATAACTATTTGACTGCTCGCTCACATATGATA
TACATGCATGTATGCTTCATGGAAGCTTTGGCTGAGCAGAACCGAGGGAA
GCTTAGTCTGATTCACATCTTCCCTGGCCTCGTGTTAGGGCCCGGGTTTG
AAAAACATGATTTGCCCGTTTGGTTTAGGGTGCTGTGGCGTTACATTTTT
GTTCCCTTCTTTGCACCGTTCCTTACTATTCCACCATCTGAGAGTGGTGA
CAGAATGTTGAGCCTTGCATCGTCTCGTTATCCGCCACGAGGAGCAAGTT
CGTCGCAGAACCAAGGGGAGACTACTATGGGGACGGATGGTAAGCTTGGA
AGCGGTGTATACTCCCTTGGTAAAACGGGAGATACCAACTACAACGCCAA
GTACTATGAGAAGATCGACAAGGACCAACTAAGGCAGAAGGTGTGGGATC
ACACTATGAGCGCTTTTGGGACTATCGAGGCAGGGGAAGTTTTTGCGGAT
TGAATGGTCGGATTAGACGACGTGCATGCCTCTAACACTGCCCTAGTTCA
GCGCCAGCCATTGGTTGCTGTTTTCTTTGGCGGTACCTCAGGCATTGGTC
ACTATACCCTGCGTGCCTTGGCCACGGCGGAAGCCAAGGGTGGCAAAGGC
TTCCGTGCATATATCGTTGGCAGAAATATCAAAGCCGCTGAAGAAATTAT
CGCAGAATGTCGTGGCATTTGTCCCAACGCCCAGATCAGATTCTTGCAAA
CTGAGGATATTTCCCTAATTCAGAACGTTAATCGCGTCTGCGAAGAGGTC
ATTCAGATGGAAGAAAAGGAGCAAGAAGATCCAAGGATAGATTATCTCAT
GCTAAGTCAGGGAGGGCCTATCTTTCAGCCACGGAAAGACACCAAAGAAG
GTATCGACGTCACGATGTCTTTGATGTACTATTCTCGAATGAGAGCAATA
ACAAAGCTCCTTCCATTGCTACTCAAGTCGACTCTCCCCGCAACAGTCGT
TTCGGTCTTTGCAGCAGGCTACGAGCAAAAGTTATTTCCCGACGATCTCT
CTTTGCGCGATCTAAATAACTATAACTATTTGACTGCTCGCTCACATATG
ATATACATGCATGTATGCTTCATGGAAGCTTTGGCTGAGCAGAACCGAGG
GAAGCTTAGTCTGATTCACATCTTCCCTGGCCTCGTGTTAGGGCCCGGGT
TTGAAAAACATGATTTGCCCGTTTGGTTTAGGGTGCTGTGGCGTTACATT
TTTGTTCCCTTCTTTGCACCGTTCCTTACTATTCCACCATCTGAGAGTGG
TGACAGAATGTTGAGCCTTGCATCGTCTCGTTATCCGCCACGAGGAGCAA
GTTCGTCGCAGAACCAAGGGGAGACTACTATGGGGACGGATGGTAAGCTT
GGAAGCGGTGTATACTCCCTTGGTAAAACGGGAGATACCAACTACAACGC
CAAGTACTATGAGAAGATCGACAAGGACCAACTAAGGCAGAAGGTGTGGG
ATCACACTATGAGCGCTTTTGGGACTATCGAGGCAGGGGAAGTTTTTGCG
GATTGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005949-T1.utr5p1 | KJC3_005949-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005949-T1.utr3p1 | KJC3_005949-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4228036..4229481 + |
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