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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4242542..4245590+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005957-T1 ID=KJC3_005957-T1|Name=KJC3_005957-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3049bp|location=Sequence derived from alignment at ch4:4242542..4245590+ (Aspergillus niger KJC3)
GAATGTTATGATCAGTATGGTAGCATTTTCATCGCGATATAAATAACCAA
TGACCTTCACTGGAACCGAAACACGTCAATAAGCGCGATTGCGCGAGACC
CGGTTATACTGTAAGAAAGCAAGAAAGAAATAAGAAACGCTTACGCGCGG
TGGCGGGAGGCGGTGATATTCCGCTGGACCCTGCCTGGAACGACCGTTAC
ATGCACTACTCTCTATTGGGGACCTTTCGGGGGGGCGAGTGGGTGGGTTG
AACAGCAGAAGGCATCCAACAATGAGTGGTTAGAAAGATAAAAAAGTGTA
GTGTCAACGACCGTGTGACTTCATTCACCAAAGATAAAGACAAGGACAGC
CTGCAGATCCAATCAGCAAGGGAATAGGCTTCGAATCAAGGGGGACATTC
TTTGGAATGAAAGGAAGCCTCGTGCGGGCGGAGAATCGGCCGAGCCGCAG
AAAAGCAGAGCGGAGAGCCGGAGGGACTGGACCATACAGTACCGGGTTTA
CGAAGGATACTATACACTTACCACGCCTCCGCGGTGCCCGCCCGCGTCCA
CATCGCGACGCGATTAGATGAAGCGTCTTTTTTCTCCGGGTTGGGGAATC
GTTCCCACATCACACCGGATCTCCTGCTCACGTCCGCCTCGCCATTTTAC
TTAGGCCACGGCCCACGTCTTTCCTTTTCTTTTCTACCTACTTTTCACTC
ATTCCTCTTGCTCTCCCTCCCCGTCCTCCTATGCTGTTCACCCGGCTTAC
GGCTATTTACCATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCC
TCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCTGCCCTCAATTACGC
CTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCG
TCGACAATAAATTGCTGGCACGGCAAAAGCGGCGTCGGACTAGGTATGCA
CGGAAACCAATTCCAGTCCTCATTGGCCCAATGGGTCTCGCTGCCAGTAG
ATCGCTAACACGTCACTGCTGTGGCCGTATAGCCCCGAAGACCACGCAAT
CCTTGAAGCCGAGTATCAACGGAACCCGAAGCCAGACAAAACGGCCCGAG
CCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAGTATGT
CTGCAATATCCATGTAATACCTACACCTGATGTGCAATCTAATGTGTCTG
AAAATCAGATCTGGTTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCG
AAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGGTCGGACGTGTCCGA
CGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGATCTT
CGAGCGGGACAGAGCAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCT
ACACAATCACCCGACCATGCGTCTTTTGAATCGGACGTGGTGCATGGAGA
CAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTA
CTGAAGCTGTGGAGGATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAA
CAACAACCGCCCCCGGTGCACGATGAAACTCATCTCGATGATTCCAACCC
AGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAATCGGC
CGTTTATGCAGGGAACATCAACACCTATGAAGTCTCCTCCATCCTTGCGG
ATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGCAAAGAAGACGAGCT
CACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCT
CTGATGGAAAAGCCGTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAG
AACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGCTTCG
AAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGG
AGACTGAAAAGTTGTTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCG
TTCTTTGACACCGATGCAAGAAGTGCACTTTCTACTCCGACCAGCTCCCA
AAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGC
GTTCACTAACGAGGAGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCT
TCGGAATATCTTAATACCCCTGTTCCTAAGCCGACTGGCGACAAAAGACG
GAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTG
CGACCCTTGGTGATAAACTGTCTAACTCGAAGACGATATCGACAAAAGAC
GATGACCTGGAGTTACAGTGGGGTGACTCTGATAAGGAGAACTGGATACC
AGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCATCACT
CGCGGCGTTCAATACTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAAC
AGGGATCTGGCATCAGGCGGAAGATACTCACGGGTGTCCCACCCGCACCA
ACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCCGAGG
TGTCGGCTTTCATGAATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTT
GACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGGGCATGGAGATGAGA
TAAGCTTCCCCTTGTGTCCTTGCGATATGATCACCATTTCCTTTGTTTAT
TTCTTTTCATCATTCCCCCTTTGTTTCATATCCATTTCTTTCCTTTGTAA
TGTCAATATTGGAGGTTACAGGCCAGCAAGCGGGTGATTGTATGTATGAT
TGTGAGATGATTGCTTTACGTTCCCAAGGGTGCAGCTCACAGGTTTGCTC
CAGGCAGCTGCAACCATGGGTCCGGACTTGATGACGAAACCCTGTGCCAC
GCCACAGATGATATCCAAGTGCTATTACAGCCGAATAGCCTAATACAACA
AAACAATGGAAGCAGATGATAGAGAATATTTGACTTGCTTGATACGTAAG
CGCCTGCGATGGGCTGATCCGGATAGCCAGGGCGAGGCGGGGGTGAAGG back to topCoding sequence (CDS) from alignment at ch4:4242542..4245590+ >KJC3_005957-T1 ID=KJC3_005957-T1|Name=KJC3_005957-T1|organism=Aspergillus niger KJC3|type=CDS|length=5202bp|location=Sequence derived from alignment at ch4:4242542..4245590+ (Aspergillus niger KJC3)
ATGTCTGATCCGGAGCCCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTC
AACCCAGGCGTCTGACTCTACTGCTGCCCTCAATTACGCCTTCCTAGTAC
ACTCCCAAAAGACCTTAACTCAGAACCTTCCTCCACGCGTCGACAATAAA
TTGCTGGCACGGCAAAAGCGGCGTCGGACTAGCCCCGAAGACCACGCAAT
CCTTGAAGCCGAGTATCAACGGAACCCGAAGCCAGACAAAACGGCCCGAG
CCAGTATAGTCAGTCGCGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGG
TTCCAAAATCGTCGTCAAAATGATCGCCGGAAATCGAAACCATTGCAACC
TCATGAGCTTCTCGCGCCTCGGTCGGACGTGTCCGACGCGTCAAAACGGG
TAGCCGATGACAACCTTCCGACGAAGCCAGGATCTTCGAGCGGGACAGAG
CAATCAGAGGGCAACTGCCAGGACAGGAACGTTGCTACACAATCACCCGA
CCATGCGTCTTTTGAATCGGACGTGGTGCATGGAGACAATAATGAGCTGG
AGCAGTCAGGGTTAAGCTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAG
GATTCGCAGAGAGCTTCAGACGAGACGATGCCGGAACAACAACCGCCCCC
GGTGCACGATGAAACTCATCTCGATGATTCCAACCCAGCTTCTGTTAAGA
GGAAACGATCATTTTCTGAGACCCGTGGCAATCGGCCGTTTATGCAGGGA
ACATCAACACCTATGAAGTCTCCTCCATCCTTGCGGATATCGCTCTCGTT
TGACGGAGAAGCTATGGTACGCAAAGAAGACGAGCTCACGCCATCTCCTC
CGAAAGGACGAAATGCCCTGCGGATCGCCATGTCCTCTGATGGAAAAGCC
GTGATCCGTGCTGATGGCGAGCCGTCTCCGTCAAAGAACCGCATTTCTAT
GTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGCTTCGAAGGAGCAACAGTG
CCGCGGCATTTAGTACGCCACGTGGTGGTTCCATGGAGACTGAAAAGTTG
TTTGGAAGATCAAGAGATCCTCGCAACTGGGAATCGTTCTTTGACACCGA
TGCAAGAAGTGCACTTTCTACTCCGACCAGCTCCCAAAGCGCACCGAACG
CTGGCTCTCCCGCTTTGTTCCGCGCACGTGGTCAGCGTTCACTAACGAGG
AGCATGTCGGCAAGGCATAGCAATGCCTTCAATTCTTCGGAATATCTTAA
TACCCCTGTTCCTAAGCCGACTGGCGACAAAAGACGGAAGATCTCCCGCA
CGGTCTCCTCATTGGGCCGGCTGGAGACAGGCCGTGCGACCCTTGGTGAT
AAACTGTCTAACTCGAAGACGATATCGACAAAAGACGATGACCTGGAGTT
ACAGTGGGGTGACTCTGATAAGGAGAACTGGATACCAGGCACACGAGTCT
CCCATGTTCGCCGGCGGACCACTTCGCATCATCACTCGCGGCGTTCAATA
CTTAGAGAGGCCAACAGCAGGGATGCCAAAGCCAACAGGGATCTGGCATC
AGGCGGAAGATACTCACGGGTGTCCCACCCGCACCAACGAGTGAGCGGGG
TAATCGACAAGGATGTGCCTGAGATGGACGCCGAGGTGTCGGCTTTCATG
AATGGCGGGGGAGGTGCAAGTCAGGAAGAAGACCTTGACTGCATTCAAGG
CTTGTTGTCTCTGAGCCAAGGGGCATGGAGATGAATGTCTGATCCGGAGC
CCTCTTCTGCACCATGCTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGAC
TCTACTGCTGCCCTCAATTACGCCTTCCTAGTACACTCCCAAAAGACCTT
AACTCAGAACCTTCCTCCACGCGTCGACAATAAATTGCTGGCACGGCAAA
AGCGGCGTCGGACTAGCCCCGAAGACCACGCAATCCTTGAAGCCGAGTAT
CAACGGAACCCGAAGCCAGACAAAACGGCCCGAGCCAGTATAGTCAGTCG
CGTCTCGTTGGGCGAGAAGGAAGTGCAAATCTGGTTCCAAAATCGTCGTC
AAAATGATCGCCGGAAATCGAAACCATTGCAACCTCATGAGCTTCTCGCG
CCTCGGTCGGACGTGTCCGACGCGTCAAAACGGGTAGCCGATGACAACCT
TCCGACGAAGCCAGGATCTTCGAGCGGGACAGAGCAATCAGAGGGCAACT
GCCAGGACAGGAACGTTGCTACACAATCACCCGACCATGCGTCTTTTGAA
TCGGACGTGGTGCATGGAGACAATAATGAGCTGGAGCAGTCAGGGTTAAG
CTCTCAAACCAGCCTGGCTACTGAAGCTGTGGAGGATTCGCAGAGAGCTT
CAGACGAGACGATGCCGGAACAACAACCGCCCCCGGTGCACGATGAAACT
CATCTCGATGATTCCAACCCAGCTTCTGTTAAGAGGAAACGATCATTTTC
TGAGACCCGTGGCAATCGGCCGTTTATGCAGGGAACATCAACACCTATGA
AGTCTCCTCCATCCTTGCGGATATCGCTCTCGTTTGACGGAGAAGCTATG
GTACGCAAAGAAGACGAGCTCACGCCATCTCCTCCGAAAGGACGAAATGC
CCTGCGGATCGCCATGTCCTCTGATGGAAAAGCCGTGATCCGTGCTGATG
GCGAGCCGTCTCCGTCAAAGAACCGCATTTCTATGTTCTCAGCGCGTAAG
CCCAGGCTTGCAGGGCTTCGAAGGAGCAACAGTGCCGCGGCATTTAGTAC
GCCACGTGGTGGTTCCATGGAGACTGAAAAGTTGTTTGGAAGATCAAGAG
ATCCTCGCAACTGGGAATCGTTCTTTGACACCGATGCAAGAAGTGCACTT
TCTACTCCGACCAGCTCCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTT
GTTCCGCGCACGTGGTCAGCGTTCACTAACGAGGAGCATGTCGGCAAGGC
ATAGCAATGCCTTCAATTCTTCGGAATATCTTAATACCCCTGTTCCTAAG
CCGACTGGCGACAAAAGACGGAAGATCTCCCGCACGGTCTCCTCATTGGG
CCGGCTGGAGACAGGCCGTGCGACCCTTGGTGATAAACTGTCTAACTCGA
AGACGATATCGACAAAAGACGATGACCTGGAGTTACAGTGGGGTGACTCT
GATAAGGAGAACTGGATACCAGGCACACGAGTCTCCCATGTTCGCCGGCG
GACCACTTCGCATCATCACTCGCGGCGTTCAATACTTAGAGAGGCCAACA
GCAGGGATGCCAAAGCCAACAGGGATCTGGCATCAGGCGGAAGATACTCA
CGGGTGTCCCACCCGCACCAACGAGTGAGCGGGGTAATCGACAAGGATGT
GCCTGAGATGGACGCCGAGGTGTCGGCTTTCATGAATGGCGGGGGAGGTG
CAAGTCAGGAAGAAGACCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGC
CAAGGGGCATGGAGATGAATGTCTGATCCGGAGCCCTCTTCTGCACCATG
CTCCTCCTCGCCGCCCTCAACCCAGGCGTCTGACTCTACTGCTGCCCTCA
ATTACGCCTTCCTAGTACACTCCCAAAAGACCTTAACTCAGAACCTTCCT
CCACGCGTCGACAATAAATTGCTGGCACGGCAAAAGCGGCGTCGGACTAG
CCCCGAAGACCACGCAATCCTTGAAGCCGAGTATCAACGGAACCCGAAGC
CAGACAAAACGGCCCGAGCCAGTATAGTCAGTCGCGTCTCGTTGGGCGAG
AAGGAAGTGCAAATCTGGTTCCAAAATCGTCGTCAAAATGATCGCCGGAA
ATCGAAACCATTGCAACCTCATGAGCTTCTCGCGCCTCGGTCGGACGTGT
CCGACGCGTCAAAACGGGTAGCCGATGACAACCTTCCGACGAAGCCAGGA
TCTTCGAGCGGGACAGAGCAATCAGAGGGCAACTGCCAGGACAGGAACGT
TGCTACACAATCACCCGACCATGCGTCTTTTGAATCGGACGTGGTGCATG
GAGACAATAATGAGCTGGAGCAGTCAGGGTTAAGCTCTCAAACCAGCCTG
GCTACTGAAGCTGTGGAGGATTCGCAGAGAGCTTCAGACGAGACGATGCC
GGAACAACAACCGCCCCCGGTGCACGATGAAACTCATCTCGATGATTCCA
ACCCAGCTTCTGTTAAGAGGAAACGATCATTTTCTGAGACCCGTGGCAAT
CGGCCGTTTATGCAGGGAACATCAACACCTATGAAGTCTCCTCCATCCTT
GCGGATATCGCTCTCGTTTGACGGAGAAGCTATGGTACGCAAAGAAGACG
AGCTCACGCCATCTCCTCCGAAAGGACGAAATGCCCTGCGGATCGCCATG
TCCTCTGATGGAAAAGCCGTGATCCGTGCTGATGGCGAGCCGTCTCCGTC
AAAGAACCGCATTTCTATGTTCTCAGCGCGTAAGCCCAGGCTTGCAGGGC
TTCGAAGGAGCAACAGTGCCGCGGCATTTAGTACGCCACGTGGTGGTTCC
ATGGAGACTGAAAAGTTGTTTGGAAGATCAAGAGATCCTCGCAACTGGGA
ATCGTTCTTTGACACCGATGCAAGAAGTGCACTTTCTACTCCGACCAGCT
CCCAAAGCGCACCGAACGCTGGCTCTCCCGCTTTGTTCCGCGCACGTGGT
CAGCGTTCACTAACGAGGAGCATGTCGGCAAGGCATAGCAATGCCTTCAA
TTCTTCGGAATATCTTAATACCCCTGTTCCTAAGCCGACTGGCGACAAAA
GACGGAAGATCTCCCGCACGGTCTCCTCATTGGGCCGGCTGGAGACAGGC
CGTGCGACCCTTGGTGATAAACTGTCTAACTCGAAGACGATATCGACAAA
AGACGATGACCTGGAGTTACAGTGGGGTGACTCTGATAAGGAGAACTGGA
TACCAGGCACACGAGTCTCCCATGTTCGCCGGCGGACCACTTCGCATCAT
CACTCGCGGCGTTCAATACTTAGAGAGGCCAACAGCAGGGATGCCAAAGC
CAACAGGGATCTGGCATCAGGCGGAAGATACTCACGGGTGTCCCACCCGC
ACCAACGAGTGAGCGGGGTAATCGACAAGGATGTGCCTGAGATGGACGCC
GAGGTGTCGGCTTTCATGAATGGCGGGGGAGGTGCAAGTCAGGAAGAAGA
CCTTGACTGCATTCAAGGCTTGTTGTCTCTGAGCCAAGGGGCATGGAGAT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0043565 | sequence-specific DNA binding |
| GO:0003677 | DNA binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005957-T1.utr5p1 | KJC3_005957-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005957-T1.utr3p1 | KJC3_005957-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR009057 |
| DBxref | InterPro:IPR017970 |
| DBxref | InterPro:IPR001356 |
| DBxref | PFAM:PF00046 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4242542..4245590 + |
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