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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4250326..4254259+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005960-T1 ID=KJC3_005960-T1|Name=KJC3_005960-T1|organism=Aspergillus niger KJC3|type=mRNA|length=3934bp|location=Sequence derived from alignment at ch4:4250326..4254259+ (Aspergillus niger KJC3)
CCATCGTTCAGCTTCCCTCATGGTCTCTCACATGATGATCATCGGAGCTC
ATTCATGGCTCTGTTGATCGTCATGATTCGATGAAGCTTGTGTCACTAAT
GCTGGCAGGTGCATCTGTTTACTGGACCTCCCTCAGTTTTCGGCAATCTC
CGTCGGTCTAAATCCGCAGTTGAAGCACAAAAACATTTCTACATCAGACC
AGTTGACTGCAATTCGAACAGTATACTTCTACAGAGTATGTTTCGCCTTA
TCTCGCTTGATCCGACAACAATGTAATGGGAGAAAATCTCCGATACGAAA
GATGCAGACCTGAATTGGAAGTCTGGGCCGGCCTAGACATCCCACATGCT
TCCAGAACCACCACACTAATGTAATGCATGCTGCACATCTTCAAAAGGGC
GCTGGATTTGCTCAGCCACTTGGCCCATTCTTCATTCGGTCTCTCCGTCA
GCTGTAAGCATGTGGTTGTCAACCGATCGCATCGTATCGCATCCCTGCTT
CATAGAGCATTCAGGCACCCCGGGATCCGGGCGATAGTGGCCTGACGTTT
CGCTCCAACCCGACACCCTAGCTTTGGATGATCGTCACGGAAGTGTCCGG
ATAGCCATGAGGCTCACCAGTCAGGCCCCATAAGCGCATACTGGTTAATT
ATTGCGATCTCCCCGGAGAAGTAGAGCGAGAAGCACGCAATCGTCCTTCC
TTTGTCACTATCGATTCGTGATTGTTCTCTGCGCAACCCCTTATTACGAA
GAGCCACGAGGACTTGAGAGGGCCATGTGGCTTAATGTGCTGGATATCCG
TCTCAACTGAATGAGTCGTTTGATTGCCAATCAATATGGTTATCAAGAAT
GGCCATGTCATCTCCAGTCCTCTTCTTGTTACTATATTGACCTTCTGCGC
CTCTTGCTTATATACCTTCAGTTATATTCAGCTGACCAGACAATATCATC
ATCCCGCCAACCTCTTGCGCTCTATCTAACCGGATACAGAATCAAGGATC
TTTTTATACTATTACAGGTGTTGATGAACAAAGCTTGGTGTTGGTCAAGC
GGCCGTCGCACAGAAACGTACTCGGGTGGCTGGCTACCCGAAGAGCTACC
GATAAACACGTCGTGATGTTCATTCTCTGCTTGCAGTAGTATATATGGTC
ATCGCAGTGCCTTGCTTCTTGAAAACAAGGGTCCTGCAGACCATCTAGCC
CTACTTCAGTAAATGGCCTGTGCCCCTATTATGGAATAAACTTGAATCAG
CGAATATTCTTCAAAAATCTTCGAGAATGTTATCGAGATTCTATCTCTCC
TTTGAAGGCCAGACTATCATCATCAGAGTCCACAGGTTATAGTGTTGTGT
CTCACTTGGGCTGCTTACAAGGAGGAGCATGCCGTTCCATCTACTATGAC
CAGGACAATACTCTTCCGGGGCATAACAAAAAAGTAGTCTTGAATGTCAC
GAGGCCCGATGCTCTCAATAGTAGAACGTGGATGCCCTTGTTCTTGCATT
CTTCCAGAATGCAGCCCGTTCTTCTGTGCAGTAGTGTTATGTTTCGCTTT
ATACCGTCGCAAACCTTCCCAACTAAGCTCATTGTGTCCAAATCAAGTCA
GGATCAGCATGGCCCATCACATGCCTTGGTAAGTTCGCGCAGATTTATCC
CACTTACGCCGATGAAACCAGGGAACACGAAACCCGCCATATCTGGTACC
ATGTTTGGGCTGTGAGGATGATTTTCCTGTGCTGCGACAGATCCGAACCC
GAGGCCGACGGTGATACGAACCCGAACCCGACCACGGCTTAAATCTGGGA
GCTCCACTCTGTACTCCACTCTATACAACAACCTTGGGTGCTCATCGTCC
ACACCGGTTCAGCCTTCTCTTGGCATCAATCCAAGTATAGGTAGAATCAC
TCAAGGAACAGGTGGATGATCATTTTCTGTGACAATGAATCGTTTCGGAT
CGAAAGAGTCCGAAGGCAGCCGGATTCCATCAGCATTGGCTGTGGCATCG
CCTCAAGAATGAAAAGGTATAAAGAGCTCACACTTGACCACGGCATTCCT
TACTTATCAGTTCACTTTATCAAGTAATCGTTGAGACTCTGACAATGAAA
TTCCTCTTGCTTCTAGCATCTTTGGCATTTTCTGCCTTGGGATCATCCCT
AGTCGGTTCTGGTCAAAGAGGCATCAATACAACCAGCACGACCACTATCA
GCACTGTGGACCTAGAAACAGGAGCTAAATGCGCATGCACCAAGCTTGCT
GGATTATACTCAAATTTGGTTCTCTATCCTGAGTCAGCCAACTACACCTC
TCAGGCTACGAGCTACTGGGATATTCGAGCAGATCTTGACCCGGCTTGCA
TCTTTCTTCCTACTTCGGCTGAGCAGGTAGCCGATGCCGTCGGTCTCTTT
GCCACATGTGGTACCCAATTTGCGGTTCGAGGCGGAGGGCATATGAATGT
AAGTAAGCTTCTGACGCGGAGTCTATATCCTCATTGACACTATACGCTGT
CTAGTATCCTGGATCGAACAATATCAATGGCGGTGTGCTTCTGGCTTTCG
ATAACATGAAACAATATCGCGTGAACAACGAAACGATTGAGGTCACTCCA
GGAATGACGTGGTACGATGTCTATTCTGCGCTTGATCCATATGGTCGGGC
TGCCATTGGCGGACGCCTGAAGACTATTGGTGTGCCTGGTCTGACCCTGA
TTGGTGGTGTATCCTACTTTATCAATAAGTACGGATTTGCCATGGATAAT
GTGGTCAACTACGACATCGTCTTGGGAAATGGCACGCAGGTTGCCGCTAA
TGCCACTTCGAATCCAGACCTGTTTTGGGCTCTGAAAGGAGGCGCGAACA
ACTTCGGCATTGTCACCAAGTTCACCCTCAAAACGTACTCTATGCCCCAT
ATCAGCACGACAATCCAAGAGTTCAACGAGACGGCAGTTCACGATTTTAT
CAAGGCGTCATGCGACTGGGTTGTTGCCGATGGTGACAGTTCTATTGCCG
CTGGTTCCGTCCTAACCATCACCTACAACGCCACGACTGGGAGCGTCTCA
CCCTTACTTTTGGGAGTTCAAGAGGGAATTAGCAACCCTCCCTCAAAATT
TGCCAACTTTACTGCTATTCCTGGAGTATACAAAGTTAACAATGTCACGA
CCTCCAAGCAATGGGCTGCGAACCTTGACTCTCCCAAGCAAATGTTCCGG
TAAACGCCCACTCACCCGTCATGTATTTGGTTGCCAGAGAACTGACCACA
GAACAGCGTCACATTCGGCCATCATTCGATGTATCCCGACTCTGACGTGT
TGTACTCAATGTATCAGACGTGGAAGGCAGCAGTAAACCAAATCGCCGAT
GTTCAAGGTCTTTATCCCACTTTCGTGATTAACATTTCGCCTTCAAGTGC
CGTCAGAGTAGGAAACACCAACGGGATTGGTAACGTCTGGGGACTAGCGG
AAGAGCCTACAATCTGTGAGTTTCCCTCAGAAGTCCTTTAAGTGGCTCAG
CAGGACCCGCCCTCTGGCTAACACACTTTCAATAGGGTGGCAACTAAGCA
CAGGCTGGGACAACGCTGAAGATGATCTTCGCGTCGAGGCGTGGGTTCGT
CAGCTGGTGGAACACCTGCATGGCATAAACAAGAGCAATGGACTCGCCAG
GGACTTCATCTACATGGGAGACGGGGGTGACTGGCAGGATCCTTTTGCTG
GATTCCCGGGCGAGAATGTGCAGCGGATGAGAGAGATCCGTGAGCGCTAT
GATCCTCTGGGTACTTTTACAAGATTGAATTGGGGTGGATTCAAGCTTGG
TAACTGAAGAGCAAAGTTACTGTGAAAGTCGATCATAGTGTAAGACGGGA
TAGTTGTGAGGCTTTCTTGGTTCGCTATTGTTAATAGCAGTTTGAACTGT
ACAGCCTAGAGTTAAGTATATACAAAAATTTGCC back to topCoding sequence (CDS) from alignment at ch4:4250326..4254259+ >KJC3_005960-T1 ID=KJC3_005960-T1|Name=KJC3_005960-T1|organism=Aspergillus niger KJC3|type=CDS|length=6120bp|location=Sequence derived from alignment at ch4:4250326..4254259+ (Aspergillus niger KJC3)
ATGAAATTCCTCTTGCTTCTAGCATCTTTGGCATTTTCTGCCTTGGGATC
ATCCCTAGTCGGTTCTGGTCAAAGAGGCATCAATACAACCAGCACGACCA
CTATCAGCACTGTGGACCTAGAAACAGGAGCTAAATGCGCATGCACCAAG
CTTGCTGGATTATACTCAAATTTGGTTCTCTATCCTGAGTCAGCCAACTA
CACCTCTCAGGCTACGAGCTACTGGGATATTCGAGCAGATCTTGACCCGG
CTTGCATCTTTCTTCCTACTTCGGCTGAGCAGGTAGCCGATGCCGTCGGT
CTCTTTGCCACATGTGGTACCCAATTTGCGGTTCGAGGCGGAGGGCATAT
GAATTATCCTGGATCGAACAATATCAATGGCGGTGTGCTTCTGGCTTTCG
ATAACATGAAACAATATCGCGTGAACAACGAAACGATTGAGGTCACTCCA
GGAATGACGTGGTACGATGTCTATTCTGCGCTTGATCCATATGGTCGGGC
TGCCATTGGCGGACGCCTGAAGACTATTGGTGTGCCTGGTCTGACCCTGA
TTGGTGGTGTATCCTACTTTATCAATAAGTACGGATTTGCCATGGATAAT
GTGGTCAACTACGACATCGTCTTGGGAAATGGCACGCAGGTTGCCGCTAA
TGCCACTTCGAATCCAGACCTGTTTTGGGCTCTGAAAGGAGGCGCGAACA
ACTTCGGCATTGTCACCAAGTTCACCCTCAAAACGTACTCTATGCCCCAT
ATCAGCACGACAATCCAAGAGTTCAACGAGACGGCAGTTCACGATTTTAT
CAAGGCGTCATGCGACTGGGTTGTTGCCGATGGTGACAGTTCTATTGCCG
CTGGTTCCGTCCTAACCATCACCTACAACGCCACGACTGGGAGCGTCTCA
CCCTTACTTTTGGGAGTTCAAGAGGGAATTAGCAACCCTCCCTCAAAATT
TGCCAACTTTACTGCTATTCCTGGAGTATACAAAGTTAACAATGTCACGA
CCTCCAAGCAATGGGCTGCGAACCTTGACTCTCCCAAGCAAATGTTCCGC
GTCACATTCGGCCATCATTCGATGTATCCCGACTCTGACGTGTTGTACTC
AATGTATCAGACGTGGAAGGCAGCAGTAAACCAAATCGCCGATGTTCAAG
GTCTTTATCCCACTTTCGTGATTAACATTTCGCCTTCAAGTGCCGTCAGA
GTAGGAAACACCAACGGGATTGGTAACGTCTGGGGACTAGCGGAAGAGCC
TACAATCTGGTGGCAACTAAGCACAGGCTGGGACAACGCTGAAGATGATC
TTCGCGTCGAGGCGTGGGTTCGTCAGCTGGTGGAACACCTGCATGGCATA
AACAAGAGCAATGGACTCGCCAGGGACTTCATCTACATGGGAGACGGGGG
TGACTGGCAGGATCCTTTTGCTGGATTCCCGGGCGAGAATGTGCAGCGGA
TGAGAGAGATCCGTGAGCGCTATGATCCTCTGGGTACTTTTACAAGATTG
AATTGGGGTGGATTCAAGCTTGGTAACTGAATGAAATTCCTCTTGCTTCT
AGCATCTTTGGCATTTTCTGCCTTGGGATCATCCCTAGTCGGTTCTGGTC
AAAGAGGCATCAATACAACCAGCACGACCACTATCAGCACTGTGGACCTA
GAAACAGGAGCTAAATGCGCATGCACCAAGCTTGCTGGATTATACTCAAA
TTTGGTTCTCTATCCTGAGTCAGCCAACTACACCTCTCAGGCTACGAGCT
ACTGGGATATTCGAGCAGATCTTGACCCGGCTTGCATCTTTCTTCCTACT
TCGGCTGAGCAGGTAGCCGATGCCGTCGGTCTCTTTGCCACATGTGGTAC
CCAATTTGCGGTTCGAGGCGGAGGGCATATGAATTATCCTGGATCGAACA
ATATCAATGGCGGTGTGCTTCTGGCTTTCGATAACATGAAACAATATCGC
GTGAACAACGAAACGATTGAGGTCACTCCAGGAATGACGTGGTACGATGT
CTATTCTGCGCTTGATCCATATGGTCGGGCTGCCATTGGCGGACGCCTGA
AGACTATTGGTGTGCCTGGTCTGACCCTGATTGGTGGTGTATCCTACTTT
ATCAATAAGTACGGATTTGCCATGGATAATGTGGTCAACTACGACATCGT
CTTGGGAAATGGCACGCAGGTTGCCGCTAATGCCACTTCGAATCCAGACC
TGTTTTGGGCTCTGAAAGGAGGCGCGAACAACTTCGGCATTGTCACCAAG
TTCACCCTCAAAACGTACTCTATGCCCCATATCAGCACGACAATCCAAGA
GTTCAACGAGACGGCAGTTCACGATTTTATCAAGGCGTCATGCGACTGGG
TTGTTGCCGATGGTGACAGTTCTATTGCCGCTGGTTCCGTCCTAACCATC
ACCTACAACGCCACGACTGGGAGCGTCTCACCCTTACTTTTGGGAGTTCA
AGAGGGAATTAGCAACCCTCCCTCAAAATTTGCCAACTTTACTGCTATTC
CTGGAGTATACAAAGTTAACAATGTCACGACCTCCAAGCAATGGGCTGCG
AACCTTGACTCTCCCAAGCAAATGTTCCGCGTCACATTCGGCCATCATTC
GATGTATCCCGACTCTGACGTGTTGTACTCAATGTATCAGACGTGGAAGG
CAGCAGTAAACCAAATCGCCGATGTTCAAGGTCTTTATCCCACTTTCGTG
ATTAACATTTCGCCTTCAAGTGCCGTCAGAGTAGGAAACACCAACGGGAT
TGGTAACGTCTGGGGACTAGCGGAAGAGCCTACAATCTGGTGGCAACTAA
GCACAGGCTGGGACAACGCTGAAGATGATCTTCGCGTCGAGGCGTGGGTT
CGTCAGCTGGTGGAACACCTGCATGGCATAAACAAGAGCAATGGACTCGC
CAGGGACTTCATCTACATGGGAGACGGGGGTGACTGGCAGGATCCTTTTG
CTGGATTCCCGGGCGAGAATGTGCAGCGGATGAGAGAGATCCGTGAGCGC
TATGATCCTCTGGGTACTTTTACAAGATTGAATTGGGGTGGATTCAAGCT
TGGTAACTGAATGAAATTCCTCTTGCTTCTAGCATCTTTGGCATTTTCTG
CCTTGGGATCATCCCTAGTCGGTTCTGGTCAAAGAGGCATCAATACAACC
AGCACGACCACTATCAGCACTGTGGACCTAGAAACAGGAGCTAAATGCGC
ATGCACCAAGCTTGCTGGATTATACTCAAATTTGGTTCTCTATCCTGAGT
CAGCCAACTACACCTCTCAGGCTACGAGCTACTGGGATATTCGAGCAGAT
CTTGACCCGGCTTGCATCTTTCTTCCTACTTCGGCTGAGCAGGTAGCCGA
TGCCGTCGGTCTCTTTGCCACATGTGGTACCCAATTTGCGGTTCGAGGCG
GAGGGCATATGAATTATCCTGGATCGAACAATATCAATGGCGGTGTGCTT
CTGGCTTTCGATAACATGAAACAATATCGCGTGAACAACGAAACGATTGA
GGTCACTCCAGGAATGACGTGGTACGATGTCTATTCTGCGCTTGATCCAT
ATGGTCGGGCTGCCATTGGCGGACGCCTGAAGACTATTGGTGTGCCTGGT
CTGACCCTGATTGGTGGTGTATCCTACTTTATCAATAAGTACGGATTTGC
CATGGATAATGTGGTCAACTACGACATCGTCTTGGGAAATGGCACGCAGG
TTGCCGCTAATGCCACTTCGAATCCAGACCTGTTTTGGGCTCTGAAAGGA
GGCGCGAACAACTTCGGCATTGTCACCAAGTTCACCCTCAAAACGTACTC
TATGCCCCATATCAGCACGACAATCCAAGAGTTCAACGAGACGGCAGTTC
ACGATTTTATCAAGGCGTCATGCGACTGGGTTGTTGCCGATGGTGACAGT
TCTATTGCCGCTGGTTCCGTCCTAACCATCACCTACAACGCCACGACTGG
GAGCGTCTCACCCTTACTTTTGGGAGTTCAAGAGGGAATTAGCAACCCTC
CCTCAAAATTTGCCAACTTTACTGCTATTCCTGGAGTATACAAAGTTAAC
AATGTCACGACCTCCAAGCAATGGGCTGCGAACCTTGACTCTCCCAAGCA
AATGTTCCGCGTCACATTCGGCCATCATTCGATGTATCCCGACTCTGACG
TGTTGTACTCAATGTATCAGACGTGGAAGGCAGCAGTAAACCAAATCGCC
GATGTTCAAGGTCTTTATCCCACTTTCGTGATTAACATTTCGCCTTCAAG
TGCCGTCAGAGTAGGAAACACCAACGGGATTGGTAACGTCTGGGGACTAG
CGGAAGAGCCTACAATCTGGTGGCAACTAAGCACAGGCTGGGACAACGCT
GAAGATGATCTTCGCGTCGAGGCGTGGGTTCGTCAGCTGGTGGAACACCT
GCATGGCATAAACAAGAGCAATGGACTCGCCAGGGACTTCATCTACATGG
GAGACGGGGGTGACTGGCAGGATCCTTTTGCTGGATTCCCGGGCGAGAAT
GTGCAGCGGATGAGAGAGATCCGTGAGCGCTATGATCCTCTGGGTACTTT
TACAAGATTGAATTGGGGTGGATTCAAGCTTGGTAACTGAATGAAATTCC
TCTTGCTTCTAGCATCTTTGGCATTTTCTGCCTTGGGATCATCCCTAGTC
GGTTCTGGTCAAAGAGGCATCAATACAACCAGCACGACCACTATCAGCAC
TGTGGACCTAGAAACAGGAGCTAAATGCGCATGCACCAAGCTTGCTGGAT
TATACTCAAATTTGGTTCTCTATCCTGAGTCAGCCAACTACACCTCTCAG
GCTACGAGCTACTGGGATATTCGAGCAGATCTTGACCCGGCTTGCATCTT
TCTTCCTACTTCGGCTGAGCAGGTAGCCGATGCCGTCGGTCTCTTTGCCA
CATGTGGTACCCAATTTGCGGTTCGAGGCGGAGGGCATATGAATTATCCT
GGATCGAACAATATCAATGGCGGTGTGCTTCTGGCTTTCGATAACATGAA
ACAATATCGCGTGAACAACGAAACGATTGAGGTCACTCCAGGAATGACGT
GGTACGATGTCTATTCTGCGCTTGATCCATATGGTCGGGCTGCCATTGGC
GGACGCCTGAAGACTATTGGTGTGCCTGGTCTGACCCTGATTGGTGGTGT
ATCCTACTTTATCAATAAGTACGGATTTGCCATGGATAATGTGGTCAACT
ACGACATCGTCTTGGGAAATGGCACGCAGGTTGCCGCTAATGCCACTTCG
AATCCAGACCTGTTTTGGGCTCTGAAAGGAGGCGCGAACAACTTCGGCAT
TGTCACCAAGTTCACCCTCAAAACGTACTCTATGCCCCATATCAGCACGA
CAATCCAAGAGTTCAACGAGACGGCAGTTCACGATTTTATCAAGGCGTCA
TGCGACTGGGTTGTTGCCGATGGTGACAGTTCTATTGCCGCTGGTTCCGT
CCTAACCATCACCTACAACGCCACGACTGGGAGCGTCTCACCCTTACTTT
TGGGAGTTCAAGAGGGAATTAGCAACCCTCCCTCAAAATTTGCCAACTTT
ACTGCTATTCCTGGAGTATACAAAGTTAACAATGTCACGACCTCCAAGCA
ATGGGCTGCGAACCTTGACTCTCCCAAGCAAATGTTCCGCGTCACATTCG
GCCATCATTCGATGTATCCCGACTCTGACGTGTTGTACTCAATGTATCAG
ACGTGGAAGGCAGCAGTAAACCAAATCGCCGATGTTCAAGGTCTTTATCC
CACTTTCGTGATTAACATTTCGCCTTCAAGTGCCGTCAGAGTAGGAAACA
CCAACGGGATTGGTAACGTCTGGGGACTAGCGGAAGAGCCTACAATCTGG
TGGCAACTAAGCACAGGCTGGGACAACGCTGAAGATGATCTTCGCGTCGA
GGCGTGGGTTCGTCAGCTGGTGGAACACCTGCATGGCATAAACAAGAGCA
ATGGACTCGCCAGGGACTTCATCTACATGGGAGACGGGGGTGACTGGCAG
GATCCTTTTGCTGGATTCCCGGGCGAGAATGTGCAGCGGATGAGAGAGAT
CCGTGAGCGCTATGATCCTCTGGGTACTTTTACAAGATTGAATTGGGGTG
GATTCAAGCTTGGTAACTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0071949 | FAD binding |
| GO:0016491 | oxidoreductase activity |
| GO:0050660 | flavin adenine dinucleotide binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005960-T1.utr3p1 | KJC3_005960-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| Note | CAZy:AA7 |
| DBxref | InterPro:IPR036318 |
| DBxref | InterPro:IPR016166 |
| DBxref | InterPro:IPR006094 |
| DBxref | PFAM:PF01565 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4250326..4254259 + |
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