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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4298260..4299985+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005974-T1 ID=KJC3_005974-T1|Name=KJC3_005974-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1726bp|location=Sequence derived from alignment at ch4:4298260..4299985+ (Aspergillus niger KJC3)
GAGTTGAACAATGCCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCT
GTCTAGGATCTTTCTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTT
ATCGACCAGGATTCCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGC
GACAGGGGGTATTGTTGCGTCCTATAATGGTTCGGACACCCGCGCCGATC
ACAACTTCTTCGCATTTCATCTCCGGCTGACATTCTGCAGGCGGTGCTAT
TCTAGGCTCGGTTTTTGTCTCCTACCTCTCTGACCCTTGGGGGCGAAGGC
CTGTTCTCTTCACCGGCGGCCTCCTCGCTAGCCTAGGGGCCGCGTTGCAG
GCTGGCGCTGTCAACGTGGCCATGCTCATTGCCGGCCGTTTGATCGCTGG
TCTTGCTATTGGGTTGATGTCCGCCATCATTCCAGTCTATTGTGTATGTA
TCGCTATAACGCATCTCTATGTAATCACTAGATTGCCGCGGGCTCTGACT
GCTCTCCCAGAGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCTTAGGTT
CACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCTGTGAGTGAT
TTATCTATCTACTATACCCCTGTCTGGCTAGTCCGCTAGTCAACTACTAG
CTCGCCCTCAATCCCTGACTAATCGCCTCCAGCAATGGGTGGGATACGGC
TGTTCGCTTCGTACAGGAGATTTCAGCTGGAGTTTCCCCTTGGCATTTCA
AGCAGTCCCCGCCGTGATTCTTAGCTGTGGCGTCTGGTTTCTCCCTGAGT
CCCCTCGTTGGCTCATAGAAAAGGGCAACCCAGATGCTGGTTGGGCGGTC
TTGAACCGCCTCCATCTACCTCGGGGACAGCTGAATGCTCTACCAGTCGA
ATCGGAATTCGAGCGAATCTCCGCGGGTATTGCGGAGGCCCGGCATTCAG
CCAACCACTCCTGGCGACAGCTTTTGTTCGCACAGCCTAATTGGCGCAAG
CGTGTGCTGCTTGCCTGTGGCATGCAGGTTTTCACACAATGCTCGGGCAC
GAATGTGCTCCAGAATTATAACCCAGGATTATACCGATCCTTGGGCTTGT
CGCAGTCCACATCGCTCATCCTGCAGGGCATCTGGGGTGCATTGGCTCAG
TTTTGGAACACCGTATTCATACTCTTCATCGATCGGGTCGACCGTCGCAA
GCTTCTCATTCCGTCGTTGCTGGGTATGGGCGCCACCATGTGCGTGGAGG
CCATCTTGGGGCAGGTGTACAATAACTTTGAAAGCGTGGCGTCACCGAAT
CACAGTGCCGTTCGTGCTGCAATCGCTGTATTCTTCGTCTTCTCTTTCTT
CTATACTAGTCTCGGGCTCATCTCTTGGATCTATCAATCCGAAATTTTCC
CCACTGCTATTCGCGCCCGGGGCTCTTCTGTAGCCACCGCCACGAATTGG
AGTCTGAATCTGGTTTTCGCTCAGTGTTCGCCAATCGCCCAGTCACGAAT
TCAGTTCAAATATTTCTACTGTTTTGCGGCCTTCAACTGGGTTGCGGCGG
GTCTCGTCTGGACCTTCTATCCAGAGACCGCCGGCAAATCGCTCGAGGAA
ATTGACCGTCTCTTTACTGCAGAAACCTCGATGCCCGCTTATGATGCAGA
CAAGCCTCACGTTTCACTGCCAAATTCAAAAGCTAAGGATTCTCTGGTGG
TATTTAGCACACAGGATACTACATAG back to topCoding sequence (CDS) from alignment at ch4:4298260..4299985+ >KJC3_005974-T1 ID=KJC3_005974-T1|Name=KJC3_005974-T1|organism=Aspergillus niger KJC3|type=CDS|length=5988bp|location=Sequence derived from alignment at ch4:4298260..4299985+ (Aspergillus niger KJC3)
ATGCCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATC
TTTCTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGG
ATTCCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGT
ATTGTTGCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTC
CTACCTCTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCC
TCCTCGCTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCC
ATGCTCATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTC
CGCCATCATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTG
GCTTCTTAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTA
GCTCAATGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTG
GAGTTTCCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTG
GCGTCTGGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAAC
CCAGATGCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACA
GCTGAATGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTA
TTGCGGAGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTC
GCACAGCCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGT
TTTCACACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGAT
TATACCGATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGC
ATCTGGGGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCAT
CGATCGGGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGG
GCGCCACCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTT
GAAAGCGTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGT
ATTCTTCGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGA
TCTATCAATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCT
GTAGCCACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTC
GCCAATCGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGG
CCTTCAACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACC
GCCGGCAAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTC
GATGCCCGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAA
AAGCTAAGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATG
CCCTATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTT
CTTGTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATT
CCTTTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATT
GTTGCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTA
CCTCTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCC
TCGCTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATG
CTCATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGC
CATCATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCT
TCTTAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCT
CAATGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAG
TTTCCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCG
TCTGGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCA
GATGCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCT
GAATGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTG
CGGAGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCA
CAGCCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTT
CACACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTAT
ACCGATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATC
TGGGGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGA
TCGGGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCG
CCACCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAA
AGCGTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATT
CTTCGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCT
ATCAATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTA
GCCACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCC
AATCGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCT
TCAACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCC
GGCAAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGAT
GCCCGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAG
CTAAGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATGCCC
TATCTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTTCTT
GTTTGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATTCCT
TTAGATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATTGTT
GCGTCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTACCT
CTCTGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCCTCG
CTAGCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATGCTC
ATTGCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGCCAT
CATTCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCT
TAGGTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCTCAA
TGGGTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAGTTT
CCCCTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCGTCT
GGTTTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCAGAT
GCTGGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCTGAA
TGCTCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTGCGG
AGGCCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCACAG
CCTAATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTTCAC
ACAATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTATACC
GATCCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATCTGG
GGTGCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGATCG
GGTCGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCGCCA
CCATGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAAAGC
GTGGCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATTCTT
CGTCTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCTATC
AATCCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTAGCC
ACCGCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCCAAT
CGCCCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCTTCA
ACTGGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCCGGC
AAATCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGATGCC
CGCTTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAGCTA
AGGATTCTCTGGTGGTATTTAGCACACAGGATACTACATAGATGCCCTAT
CTTCTCGTTACGCTCTGTTGTTTGTTCGCCTGTCTAGGATCTTTCTTGTT
TGGCTATGACTCCGGGGTAATATCCTCTGTTATCGACCAGGATTCCTTTA
GATATCGCTTCCACAATCCTTCTGCTGCAGCGACAGGGGGTATTGTTGCG
TCCTATAATGGCGGTGCTATTCTAGGCTCGGTTTTTGTCTCCTACCTCTC
TGACCCTTGGGGGCGAAGGCCTGTTCTCTTCACCGGCGGCCTCCTCGCTA
GCCTAGGGGCCGCGTTGCAGGCTGGCGCTGTCAACGTGGCCATGCTCATT
GCCGGCCGTTTGATCGCTGGTCTTGCTATTGGGTTGATGTCCGCCATCAT
TCCAGTCTATTGTAGTGAGCTATCTCCTCCCCGTATTCGTGGCTTCTTAG
GTTCACTGCAGCAATGGATGATTGGACTCGGAGTTGTTGTAGCTCAATGG
GTGGGATACGGCTGTTCGCTTCGTACAGGAGATTTCAGCTGGAGTTTCCC
CTTGGCATTTCAAGCAGTCCCCGCCGTGATTCTTAGCTGTGGCGTCTGGT
TTCTCCCTGAGTCCCCTCGTTGGCTCATAGAAAAGGGCAACCCAGATGCT
GGTTGGGCGGTCTTGAACCGCCTCCATCTACCTCGGGGACAGCTGAATGC
TCTACCAGTCGAATCGGAATTCGAGCGAATCTCCGCGGGTATTGCGGAGG
CCCGGCATTCAGCCAACCACTCCTGGCGACAGCTTTTGTTCGCACAGCCT
AATTGGCGCAAGCGTGTGCTGCTTGCCTGTGGCATGCAGGTTTTCACACA
ATGCTCGGGCACGAATGTGCTCCAGAATTATAACCCAGGATTATACCGAT
CCTTGGGCTTGTCGCAGTCCACATCGCTCATCCTGCAGGGCATCTGGGGT
GCATTGGCTCAGTTTTGGAACACCGTATTCATACTCTTCATCGATCGGGT
CGACCGTCGCAAGCTTCTCATTCCGTCGTTGCTGGGTATGGGCGCCACCA
TGTGCGTGGAGGCCATCTTGGGGCAGGTGTACAATAACTTTGAAAGCGTG
GCGTCACCGAATCACAGTGCCGTTCGTGCTGCAATCGCTGTATTCTTCGT
CTTCTCTTTCTTCTATACTAGTCTCGGGCTCATCTCTTGGATCTATCAAT
CCGAAATTTTCCCCACTGCTATTCGCGCCCGGGGCTCTTCTGTAGCCACC
GCCACGAATTGGAGTCTGAATCTGGTTTTCGCTCAGTGTTCGCCAATCGC
CCAGTCACGAATTCAGTTCAAATATTTCTACTGTTTTGCGGCCTTCAACT
GGGTTGCGGCGGGTCTCGTCTGGACCTTCTATCCAGAGACCGCCGGCAAA
TCGCTCGAGGAAATTGACCGTCTCTTTACTGCAGAAACCTCGATGCCCGC
TTATGATGCAGACAAGCCTCACGTTTCACTGCCAAATTCAAAAGCTAAGG
ATTCTCTGGTGGTATTTAGCACACAGGATACTACATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005974-T1.utr5p1 | KJC3_005974-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | SECRETED:SignalP(1-16) |
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4298260..4299985 + |
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