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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4307329..4309403- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005978-T1 ID=KJC3_005978-T1|Name=KJC3_005978-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2075bp|location=Sequence derived from alignment at ch4:4307329..4309403- (Aspergillus niger KJC3)
GTATACATTGCACCATAAGGCTGCATTTATGAGAATGAACATGCTCGACC
CTGTTTCATACTGTCATACTTAACCGAGTCAAGCCTAAGACGCAAGTTCA
CTGGATTTTTAGATATCCTCAGCACAATTTCAGAGGAATCCTACTCAATA
GACGCGTTGCAGAGCTACGCGTTTTTTCCACCGTCCAGTCCGATCCACTG
AAGAGCATTATGTCCATTAACGCTTATATTGAAGGTGCTGAGCCAGCCTC
GCCTGTTTTGGCTCATACTATGTTGCCGTCTGGCTCATCAGCAGGGATCA
AACACGAACAAAGTCAACAACACCCTGTGGAACAAAGCTGGAATCTTTCA
GATGACGTGCAAAAGGGACTTCACAATGGTCCAGGCAGCGTTTTCAAAAG
CGGCATAGTCATTGGCTTCTCCAGGCTTAGAGACGCACACAATGAGACAA
GTGATGAGGACGAGTACATCGGAACAGTATGTCTGCCTTCTCCATAAACA
GGTTTCCGTGCCTTGCCCTTAGTCTGTCAAGTCATACATCCAAACCTCTT
GCTCCCATATCCACGCCCCCGCTATACCCCTTACGAAAAATCATCAATTC
CCCATATAACAACACCTCCAACCAGCAACAGAAGATAACTAACAACCTCA
AGCTCCCCCGCCACCTCCTCACAACCTATCTACATCAACATCACCCCAAC
CAAACAAAAGTCTACATAATCCACCCCGTCAACTTCAGCGCCTTCACTCC
TCAACGCCTCCTCGCCTCCCTCCTCAACAATCAACCCTCTCTATCCCGAA
CTCAGGCAATCACCCTCCTTGACTCCGTCCAACTATTCCCTGTCTACGAC
TTCAACGCAGCCGCACAAGCCATACACGAGATCGCAACTACCATATCAAC
CACACCATTGACAGAAACACCAGATCAGCGCCTCATCATAATCACAGGTC
TGGACACCCTAGCCGAGGGCGTAATACGTGCTTCGAACCCCCTTCGGGGA
TCTGCAATGCTCATGTCTATATTACGTACACTAACGCAGATGACTCGAAC
GCACGGATCGAATCTCTCTGTGATGCTGGTGAATACTAGCGGATTGGGGA
AGGTGGCGTCGTCTCAGAGTGGGGTGACGGAGATTGATGATAACGCTATT
GGGGGAATGTATGAGGTGGATGGCGAGGGGATTCAGTCTGTGTTTCGTGC
GCATAGTGGTGAGATGTTTCCGAGTCTTTTGATGAAGACGCTGGATCAGG
GGATCGATACGCATCTGTTGGTGTCGAGTATTGGAAGGGTTCCGGTTGTG
GAGGTTATTAAGGATAGAGTGGGTGGGAATGTTGGGAGGTGGTGTGTTCT
GGAGGGTGAGCTTTGTGTGGTTGGCTGAGGGAGGTCATAACTCATTATAT
GAGATTTGGTAGTTGCTATGCGCTGCAGGGTGTGCATACCCTGATGTATG
ATATTGCGACCTATGTAAATAGCCTTATTCCCCGCTTACTCCACTTGAAT
ATCTCCTTCCACTGGAAATATCAAAAAACAAAAATCCTTGACCCCGTCTA
TCATGCAAGTACTATGCACCAGTTCCAACTTTTCCCCCTTTTTCAGACCA
AAACCGCCTTTCCGCGCTGACTAACTCCAGTTGCTAATCCTGCTTTTATT
CCGGATAAATAAATGATGATGAATGGGGGTATCAACCGAATCAAGTCAAT
TGTCAAACGCGACAAAGAATGAGGGAAATAGAAAGCGTATAGGAGGTATG
AGAGACGGAATGATGTGGGGAAGGACATTTTGCGCTTGGTTAGCTTCTGC
AGTATGTATTACTGGCCACCAATTTGCGCATTGTCTGATTCGGCCCACAT
CCTAAGAACGGCCCTCTCCACGACATTCTTCGCTTCCTTCTCGCATTTGC
TTAGATCCAGAGCGAGGGTGTTTTCCTCGAATACAGCATCTTGCTGTTGG
ACCTTGAGCCATTGTTTATGTCTCTCGCAACGCTTCTTAGTACAGACACC
ACGTGAGAGTTTCTCGAAGTCATCTTCGTTGTTGTCATCCATGGCGGTGT
CGCCATCGGCGTCCGTGGAAGCGTC back to topCoding sequence (CDS) from alignment at ch4:4307329..4309403- >KJC3_005978-T1 ID=KJC3_005978-T1|Name=KJC3_005978-T1|organism=Aspergillus niger KJC3|type=CDS|length=1986bp|location=Sequence derived from alignment at ch4:4307329..4309403- (Aspergillus niger KJC3)
CTCCCCCGCCACCTCCTCACAACCTATCTACATCAACATCACCCCAACCA
AACAAAAGTCTACATAATCCACCCCGTCAACTTCAGCGCCTTCACTCCTC
AACGCCTCCTCGCCTCCCTCCTCAACAATCAACCCTCTCTATCCCGAACT
CAGGCAATCACCCTCCTTGACTCCGTCCAACTATTCCCTGTCTACGACTT
CAACGCAGCCGCACAAGCCATACACGAGATCGCAACTACCATATCAACCA
CACCATTGACAGAAACACCAGATCAGCGCCTCATCATAATCACAGGTCTG
GACACCCTAGCCGAGGGCGTAATACGTGCTTCGAACCCCCTTCGGGGATC
TGCAATGCTCATGTCTATATTACGTACACTAACGCAGATGACTCGAACGC
ACGGATCGAATCTCTCTGTGATGCTGGTGAATACTAGCGGATTGGGGAAG
GTGGCGTCGTCTCAGAGTGGGGTGACGGAGATTGATGATAACGCTATTGG
GGGAATGTATGAGGTGGATGGCGAGGGGATTCAGTCTGTGTTTCGTGCGC
ATAGTGGTGAGATGTTTCCGAGTCTTTTGATGAAGACGCTGGATCAGGGG
ATCGATACGCATCTGTTGGTGTCGAGTATTGGAAGGGTTCCGGTTGTGGA
GGTTATTAAGGATAGAGTGGGTGGGAATGTTGGGAGGTGGTGTGTTCTGG
AGGGTGAGCTTTGTGTGGTTGGCTGAATGTCCATTAACGCTTATATTGAA
GGTGCTGAGCCAGCCTCGCCTGTTTTGGCTCATACTATGTTGCCGTCTGG
CTCATCAGCAGGGATCAAACACGAACAAAGTCAACAACACCCTGTGGAAC
AAAGCTGGAATCTTTCAGATGACGTGCAAAAGGGACTTCACAATGGTCCA
GGCAGCGTTTTCAAAAGCGGCATAGTCATTGGCTTCTCCAGGCTTAGAGA
CGCACACAATGAGACAAGTGATGAGGACGAGTACATCGGAACACTCCCCC
GCCACCTCCTCACAACCTATCTACATCAACATCACCCCAACCAAACAAAA
GTCTACATAATCCACCCCGTCAACTTCAGCGCCTTCACTCCTCAACGCCT
CCTCGCCTCCCTCCTCAACAATCAACCCTCTCTATCCCGAACTCAGGCAA
TCACCCTCCTTGACTCCGTCCAACTATTCCCTGTCTACGACTTCAACGCA
GCCGCACAAGCCATACACGAGATCGCAACTACCATATCAACCACACCATT
GACAGAAACACCAGATCAGCGCCTCATCATAATCACAGGTCTGGACACCC
TAGCCGAGGGCGTAATACGTGCTTCGAACCCCCTTCGGGGATCTGCAATG
CTCATGTCTATATTACGTACACTAACGCAGATGACTCGAACGCACGGATC
GAATCTCTCTGTGATGCTGGTGAATACTAGCGGATTGGGGAAGGTGGCGT
CGTCTCAGAGTGGGGTGACGGAGATTGATGATAACGCTATTGGGGGAATG
TATGAGGTGGATGGCGAGGGGATTCAGTCTGTGTTTCGTGCGCATAGTGG
TGAGATGTTTCCGAGTCTTTTGATGAAGACGCTGGATCAGGGGATCGATA
CGCATCTGTTGGTGTCGAGTATTGGAAGGGTTCCGGTTGTGGAGGTTATT
AAGGATAGAGTGGGTGGGAATGTTGGGAGGTGGTGTGTTCTGGAGGGTGA
GCTTTGTGTGGTTGGCTGAATGTCCATTAACGCTTATATTGAAGGTGCTG
AGCCAGCCTCGCCTGTTTTGGCTCATACTATGTTGCCGTCTGGCTCATCA
GCAGGGATCAAACACGAACAAAGTCAACAACACCCTGTGGAACAAAGCTG
GAATCTTTCAGATGACGTGCAAAAGGGACTTCACAATGGTCCAGGCAGCG
TTTTCAAAAGCGGCATAGTCATTGGCTTCTCCAGGCTTAGAGACGCACAC
AATGAGACAAGTGATGAGGACGAGTACATCGGAACA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005978-T1.utr5p1 | KJC3_005978-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4307329..4309403 - |
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