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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4319999..4320797- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005984-T1 ID=KJC3_005984-T1|Name=KJC3_005984-T1|organism=Aspergillus niger KJC3|type=mRNA|length=799bp|location=Sequence derived from alignment at ch4:4319999..4320797- (Aspergillus niger KJC3)
ACTCACCGCATCCCAGACCATCTCCAAGCAATGCGATAATCGCATCATCT
CTTCTCAACATCAACTCAATTCCTCTCAATTTACGAGTTCCTAAATCGAC
CTAGCACACAAAAATGCCCCCCAAAGCGCCCAAGGGCGAATACATCGAAA
CAGTACGCCCCATCACATCCCATCCCCTCCCCCCCAAATAACAACAAACA
AACCCCCCATACTAACCCAACCCCAGGACACAGGCAACAAAATCTCCCGC
CGATCTCTAATCCACGGAACCCAACACATCATTCTCGGCGGCAAGACAGT
AATCCAAGCGGACGCCGTCATCCGAGGCGACCTCTACCGCTCCTCATCCT
CATCGTCCTCCGCCTCCGACCCGCAACAAGCCGCCGCCGGCGGCGCACCA
AACAGTCCCTCCGTGGCCATCACAGTAGGACGATACAGCTACATCTCGCG
ACAAGCGATCCTACGCCCACCTTCGCGACTACACCGCGGCGTGTACTCGT
TCTATCCGCTCAAGATCGGGGATCATGTGTTTGTGGGCGAGCGGGCGGTA
GTGGAGGCCGCGACGGTGGGGAATCATGTGCATATTGGGAAGGATGCGGT
GGTGGGGAGTATGGCGATCTTGAAGGATTTCGTGTATGTGTTGGATGGGG
CGGTGGTGCCGGGGGGAATGGTGGTGCCGAGTTGGTGTGTGGTTGGAGGC
GCGCCGGCGAGGATTGTGGGTGAGGTTGGGGAGGGGTATGGGGTTGAGGG
GGCCGAGGGAGGATTGGCGAGGGAGAGGTATAGGTTGGTTGGGAGGTGA back to topCoding sequence (CDS) from alignment at ch4:4319999..4320797- >KJC3_005984-T1 ID=KJC3_005984-T1|Name=KJC3_005984-T1|organism=Aspergillus niger KJC3|type=CDS|length=1224bp|location=Sequence derived from alignment at ch4:4319999..4320797- (Aspergillus niger KJC3)
GACACAGGCAACAAAATCTCCCGCCGATCTCTAATCCACGGAACCCAACA
CATCATTCTCGGCGGCAAGACAGTAATCCAAGCGGACGCCGTCATCCGAG
GCGACCTCTACCGCTCCTCATCCTCATCGTCCTCCGCCTCCGACCCGCAA
CAAGCCGCCGCCGGCGGCGCACCAAACAGTCCCTCCGTGGCCATCACAGT
AGGACGATACAGCTACATCTCGCGACAAGCGATCCTACGCCCACCTTCGC
GACTACACCGCGGCGTGTACTCGTTCTATCCGCTCAAGATCGGGGATCAT
GTGTTTGTGGGCGAGCGGGCGGTAGTGGAGGCCGCGACGGTGGGGAATCA
TGTGCATATTGGGAAGGATGCGGTGGTGGGGAGTATGGCGATCTTGAAGG
ATTTCGTGTATGTGTTGGATGGGGCGGTGGTGCCGGGGGGAATGGTGGTG
CCGAGTTGGTGTGTGGTTGGAGGCGCGCCGGCGAGGATTGTGGGTGAGGT
TGGGGAGGGGTATGGGGTTGAGGGGGCCGAGGGAGGATTGGCGAGGGAGA
GGTATAGGTTGGTTGGGAGGTGAATGCCCCCCAAAGCGCCCAAGGGCGAA
TACATCGAAACAGACACAGGCAACAAAATCTCCCGCCGATCTCTAATCCA
CGGAACCCAACACATCATTCTCGGCGGCAAGACAGTAATCCAAGCGGACG
CCGTCATCCGAGGCGACCTCTACCGCTCCTCATCCTCATCGTCCTCCGCC
TCCGACCCGCAACAAGCCGCCGCCGGCGGCGCACCAAACAGTCCCTCCGT
GGCCATCACAGTAGGACGATACAGCTACATCTCGCGACAAGCGATCCTAC
GCCCACCTTCGCGACTACACCGCGGCGTGTACTCGTTCTATCCGCTCAAG
ATCGGGGATCATGTGTTTGTGGGCGAGCGGGCGGTAGTGGAGGCCGCGAC
GGTGGGGAATCATGTGCATATTGGGAAGGATGCGGTGGTGGGGAGTATGG
CGATCTTGAAGGATTTCGTGTATGTGTTGGATGGGGCGGTGGTGCCGGGG
GGAATGGTGGTGCCGAGTTGGTGTGTGGTTGGAGGCGCGCCGGCGAGGAT
TGTGGGTGAGGTTGGGGAGGGGTATGGGGTTGAGGGGGCCGAGGGAGGAT
TGGCGAGGGAGAGGTATAGGTTGGTTGGGAGGTGAATGCCCCCCAAAGCG
CCCAAGGGCGAATACATCGAAACA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005984-T1.utr5p1 | KJC3_005984-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR011004 |
| DBxref | InterPro:IPR001451 |
| DBxref | PFAM:PF00132 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4319999..4320797 - |
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