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KJC3_005986-T1, KJC3_005986-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005986-T1
Unique NameKJC3_005986-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4322765..4324465-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005986-T1 ID=KJC3_005986-T1|Name=KJC3_005986-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1701bp|location=Sequence derived from alignment at ch4:4322765..4324465- (Aspergillus niger KJC3)
AACCTACTAACAATCCAAAGTAATACTCGATTATAGTATCTCAGATTAAC
CTTAATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGATGAAG
ACCTCTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTCGGCCC
GTTGATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTGGGAAA
CAAGCCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCAGATTG
CGTCTCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCCCGGCA
GGTGACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTCAGCCC
CCTTTTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATCCTTGA
GCCAAGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGAACCGC
TCGTGGGATGTGTAAGTTGCTCTATTCACAGCTTTGCACAAGTAAATCTG
ATAAGTGCCAGTTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCC
TGTACTCCTTACTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAA
ATCGTGCTCTGAAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGG
CTTGTCTTGTCTTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCG
CAGTACCACACGTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCAC
CATCATCGGAGCACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCT
GCTTTCGAGACCATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAA
GAAATCTTCCAAGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATA
TGCAGCAGATGGTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATG
GATGACATTGAAGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCAC
AGTGCCCACAGTGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTT
TCTGGAGAGAGCCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGC
TGCCATAGCCAGGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAG
TCTGGTGGGGGTTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTA
TCCAGTCCCGGCATCTACGAGTGAGAGAATACGGCCATATCGTGAACCAT
GAGTTCGTGTCGGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATG
GGTGCTGCAACGAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGG
GCGATGCACTGGACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCA
GATGTCAAGTATCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGA
CCAGATCGACACAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGG
TACGGTCGCTGGGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTAC
TTGCACAATGCCGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGC
CAGCTTTATGGGAGCGAGTGAGGAAGACTCAGCGTAGGGCTCATACATGC
ATTGTTAGCCTATCATCCTCTTCAGAAGTTCCTTTTTAATTTGAATTTTA
C
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Coding sequence (CDS) from alignment at ch4:4322765..4324465-

>KJC3_005986-T1 ID=KJC3_005986-T1|Name=KJC3_005986-T1|organism=Aspergillus niger KJC3|type=CDS|length=3066bp|location=Sequence derived from alignment at ch4:4322765..4324465- (Aspergillus niger KJC3)
TTATTTTGTCCACGCACCAGCTTCTCTCGGATCTAAGCCTGTACTCCTTA
CTCCCACCGATGGAGTCAGTTCCTTCTTGGAAGAGATAAATCGTGCTCTG
AAGTGTGAATTGTCGTTGCCAGCAGATATGTCCGCCGGGCTTGTCTTGTC
TTTCAAAGATGGGTATCCTCAGCCTGTCTACCTCGGCCGCAGTACCACAC
GTGAGACCAAGGACCAGCTCGAGTTGCAAATTCCTTCACCATCATCGGAG
CACAACAGTTCTTCTGGAGACATGGACGAGGAATACGCTGCTTTCGAGAC
CATGGTGGAAGCCGCTATCGAGGCCACCAGGAACAAAAAGAAATCTTCCA
AGCAGAAACTGTTGATGCGTGCGATGAAAGAGCTTGATATGCAGCAGATG
GTTCGACGGATGCAGTGCTACTTTGGTTTGCGTTCGATGGATGACATTGA
AGGGACAGCAGACATGGGTGACTGGGATACCCCGGGCACAGTGCCCACAG
TGCAGCCGCTAGATGCCACCAAGGCAGTACCGTATCCTTTCTGGAGAGAG
CCCGTGTTTATCAGTATCGACGTAGAGTCGAATGAGCGCTGCCATAGCCA
GGTGACTGAGGTCGGAGTGTCAGTGTTGGACATGCGGAGTCTGGTGGGGG
TTCCGCCGGGCGTGAACGGCGATCAGTGGCGGAGCCGTATCCAGTCCCGG
CATCTACGAGTGAGAGAATACGGCCATATCGTGAACCATGAGTTCGTGTC
GGGCTGTCCTGGCATGTTTCAGTTCGGAGAGAGCGAATGGGTGCTGCAAC
GAGACTTGGTGGACGTAGTGCGATCAAGCCTGCGCTTGGGCGATGCACTG
GACCGTCGCCTCGTATTGGTCGGCCACAATCTTTCAGCAGATGTCAAGTA
TCTCAAGCAAGTTGGGGTGGATGTGGGAGGGTTTCGTGACCAGATCGACA
CAGCGCAGATGTTTCGCAAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTG
GGAGGCGTGCTGGCGAAACTGGACATTAAGGGCTGGTACTTGCACAATGC
CGGGAATGATGCGCGGTACACTATGGAGGTTCTCGTCGCCAGCTTTATGG
GAGCGAGTGAGGAAGACTCAGCGTAGATGGGTCCCGAAGAACGCCTTAGG
CTGCTTTTTGCGCGGGATGAAGACCTCTTGAAGATGGACACTGGCCGCCG
TCAGGCAACCGAATCTCGGCCCGTTGATGACACTGGTGGCCCTCAGACAG
AGCATACCGAGAACCTGGGAAACAAGCCTTCAGCTATAACTACCCAGAAC
ACAACTCAACCCACTCAGATTGCGTCTCCTGAACTCCCTTCTCCACCCAA
GCTCCCTGCTCCAGCCCCGGCAGGTGACTCTCAATATGAACACGTATTTC
CTCTCAACGGCCAGTTCAGCCCCCTTTTGGCTATTGCCAAATATCCCTAC
AGACATATAAAAGGATCCTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGA
CGCAGGTAAATTCTGGAACCGCTCGTGGGATGTTTATTTTGTCCACGCAC
CAGCTTCTCTCGGATCTAAGCCTGTACTCCTTACTCCCACCGATGGAGTC
AGTTCCTTCTTGGAAGAGATAAATCGTGCTCTGAAGTGTGAATTGTCGTT
GCCAGCAGATATGTCCGCCGGGCTTGTCTTGTCTTTCAAAGATGGGTATC
CTCAGCCTGTCTACCTCGGCCGCAGTACCACACGTGAGACCAAGGACCAG
CTCGAGTTGCAAATTCCTTCACCATCATCGGAGCACAACAGTTCTTCTGG
AGACATGGACGAGGAATACGCTGCTTTCGAGACCATGGTGGAAGCCGCTA
TCGAGGCCACCAGGAACAAAAAGAAATCTTCCAAGCAGAAACTGTTGATG
CGTGCGATGAAAGAGCTTGATATGCAGCAGATGGTTCGACGGATGCAGTG
CTACTTTGGTTTGCGTTCGATGGATGACATTGAAGGGACAGCAGACATGG
GTGACTGGGATACCCCGGGCACAGTGCCCACAGTGCAGCCGCTAGATGCC
ACCAAGGCAGTACCGTATCCTTTCTGGAGAGAGCCCGTGTTTATCAGTAT
CGACGTAGAGTCGAATGAGCGCTGCCATAGCCAGGTGACTGAGGTCGGAG
TGTCAGTGTTGGACATGCGGAGTCTGGTGGGGGTTCCGCCGGGCGTGAAC
GGCGATCAGTGGCGGAGCCGTATCCAGTCCCGGCATCTACGAGTGAGAGA
ATACGGCCATATCGTGAACCATGAGTTCGTGTCGGGCTGTCCTGGCATGT
TTCAGTTCGGAGAGAGCGAATGGGTGCTGCAACGAGACTTGGTGGACGTA
GTGCGATCAAGCCTGCGCTTGGGCGATGCACTGGACCGTCGCCTCGTATT
GGTCGGCCACAATCTTTCAGCAGATGTCAAGTATCTCAAGCAAGTTGGGG
TGGATGTGGGAGGGTTTCGTGACCAGATCGACACAGCGCAGATGTTTCGC
AAGCTGCGGAAGGAAGAGTCGGTACGGTCGCTGGGAGGCGTGCTGGCGAA
ACTGGACATTAAGGGCTGGTACTTGCACAATGCCGGGAATGATGCGCGGT
ACACTATGGAGGTTCTCGTCGCCAGCTTTATGGGAGCGAGTGAGGAAGAC
TCAGCGTAGATGGGTCCCGAAGAACGCCTTAGGCTGCTTTTTGCGCGGGA
TGAAGACCTCTTGAAGATGGACACTGGCCGCCGTCAGGCAACCGAATCTC
GGCCCGTTGATGACACTGGTGGCCCTCAGACAGAGCATACCGAGAACCTG
GGAAACAAGCCTTCAGCTATAACTACCCAGAACACAACTCAACCCACTCA
GATTGCGTCTCCTGAACTCCCTTCTCCACCCAAGCTCCCTGCTCCAGCCC
CGGCAGGTGACTCTCAATATGAACACGTATTTCCTCTCAACGGCCAGTTC
AGCCCCCTTTTGGCTATTGCCAAATATCCCTACAGACATATAAAAGGATC
CTTGAGCCAAGAGGTTTCCAGCCGCTTCTTCGACGCAGGTAAATTCTGGA
ACCGCTCGTGGGATGT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0003676nucleic acid binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005986KJC3_005986Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005986-T1KJC3_005986-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005986-T1.cdsKJC3_005986-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005986-T1.utr3p1KJC3_005986-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005986-T1.exon2KJC3_005986-T1.exon2Aspergillus niger KJC3exon
KJC3_005986-T1.exon1KJC3_005986-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005986-T1.utr5p1KJC3_005986-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR012337
DBxrefInterPro:IPR036397
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4322765..4324465 -
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