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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4325188..4326385- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005987-T2 ID=KJC3_005987-T2|Name=KJC3_005987-T2|organism=Aspergillus niger KJC3|type=mRNA|length=1198bp|location=Sequence derived from alignment at ch4:4325188..4326385- (Aspergillus niger KJC3)
GTGCCATGTACTGGCCAACTTCGCAAAACGAAAAATGGTTCTGCGGAACA
CTGTTCGTGCAAGGACTGCTTGTTCTCGTGTTGAACATGTGAGTTCAAAC
AATGCTATAACCACATCGTCCGCAACTACTTACTACATCCCAGATATAAC
CTCATTCAGTGGCAATCATGGACGAATCCCAATGCCACTCAGGTCGCCAT
ATCATACCAGGTCCCCATCAACATTGCACTCATCATGTTTGCTGTCGTTT
ATGAGATATTTCTTGGCCTTGACATGGTACATCATAAGAATATTATATTG
CTTCTAGCCCTTTGCATTAGCAATGGCTGTGTCCTCGCCTATTCTGTGAT
GCAGTACATGTCTATTCATCATACCACCTTGACTATTGGAGAGAACCGCG
ACTATCTCGGCCGACCATTGGTGGACTTATCAAGAGACCTGTGGAAAGAA
ATCCAGCCTGCTGAGCTTCTGGTTCCCATCACCGTCAGTATTGCGACGCT
CTTTATGTGGCCGATCGCGTATTGGGTCCATAGAGAATTTTCCTGGGCTA
TATACCAGTATGTTCAGGGGAGCCCTAAGAGTCGTAAACAATATCGAGGA
TATGAGGTACTTGAAGTCCTCCAGAACTTGGGTCATTGGGGACTTGTGAT
TAACTCCGGCAGGCATATCTTGTTCTAATCAAGTTCGACTTCTTCTTCCT
GGTGGGCTTTATCATTCAGTATGACCTCGTTGACGTCCACTTTGAGGAGC
CCGAGTACTCCTTGACATTAGCACTCATTCCAGCCGCATTGCTGGTGATG
ACTGTGGGCACATATTTTGTCCGACGTGAACACAGAATTTCTACCATCAT
TATTGCAGTTAGTCATGGAACCTCAAATTATGATGTCCAAATAACTAACT
CGAGCAGGTCTGCCGTCTAGGCATTGCGGCCTATTTACTGAGTCGGATCA
TCGTTCTATGTGGAAATACTTTGCGTGGCAACACACCAGGGAAGGACATG
ATGCTGCTCTTTGCCAGTGTAGCATTTGTCCTTTCCTGCCTTATCATTGT
ATGCACGGTATATTGCATACTGAACTTTGAACATGGTCTCAAGTCGGTGT
TTGCCCGGAAGAATCAAGTCGCTCAGCGGTCTTTCGTGTTCCAGGAGCTT
CCAAGCCACCCGAACAGTACTCGACACTCTAGACTCTCCCTTGATTAA back to topCoding sequence (CDS) from alignment at ch4:4325188..4326385- >KJC3_005987-T2 ID=KJC3_005987-T2|Name=KJC3_005987-T2|organism=Aspergillus niger KJC3|type=CDS|length=4128bp|location=Sequence derived from alignment at ch4:4325188..4326385- (Aspergillus niger KJC3)
GTCTGCCGTCTAGGCATTGCGGCCTATTTACTGAGTCGGATCATCGTTCT
ATGTGGAAATACTTTGCGTGGCAACACACCAGGGAAGGACATGATGCTGC
TCTTTGCCAGTGTAGCATTTGTCCTTTCCTGCCTTATCATTGTATGCACG
GTATATTGCATACTGAACTTTGAACATGGTCTCAAGTCGGTGTTTGCCCG
GAAGAATCAAGTCGCTCAGCGGTCTTTCGTGTTCCAGGAGCTTCCAAGCC
ACCCGAACAGTACTCGACACTCTAGACTCTCCCTTGATTAAGCATATCTT
GTTCTAATCAAGTTCGACTTCTTCTTCCTGGTGGGCTTTATCATTCAGTA
TGACCTCGTTGACGTCCACTTTGAGGAGCCCGAGTACTCCTTGACATTAG
CACTCATTCCAGCCGCATTGCTGGTGATGACTGTGGGCACATATTTTGTC
CGACGTGAACACAGAATTTCTACCATCATTATTGCAATATAACCTCATTC
AGTGGCAATCATGGACGAATCCCAATGCCACTCAGGTCGCCATATCATAC
CAGGTCCCCATCAACATTGCACTCATCATGTTTGCTGTCGTTTATGAGAT
ATTTCTTGGCCTTGACATGGTACATCATAAGAATATTATATTGCTTCTAG
CCCTTTGCATTAGCAATGGCTGTGTCCTCGCCTATTCTGTGATGCAGTAC
ATGTCTATTCATCATACCACCTTGACTATTGGAGAGAACCGCGACTATCT
CGGCCGACCATTGGTGGACTTATCAAGAGACCTGTGGAAAGAAATCCAGC
CTGCTGAGCTTCTGGTTCCCATCACCGTCAGTATTGCGACGCTCTTTATG
TGGCCGATCGCGTATTGGGTCCATAGAGAATTTTCCTGGGCTATATACCA
GTATGTTCAGGGGAGCCCTAAGAGTCGTAAACAATATCGAGGATATGAGA
TGTACTGGCCAACTTCGCAAAACGAAAAATGGTTCTGCGGAACACTGTTC
GTGCAAGGACTGCTTGTTCTCGTGTTGAACATGTCTGCCGTCTAGGCATT
GCGGCCTATTTACTGAGTCGGATCATCGTTCTATGTGGAAATACTTTGCG
TGGCAACACACCAGGGAAGGACATGATGCTGCTCTTTGCCAGTGTAGCAT
TTGTCCTTTCCTGCCTTATCATTGTATGCACGGTATATTGCATACTGAAC
TTTGAACATGGTCTCAAGTCGGTGTTTGCCCGGAAGAATCAAGTCGCTCA
GCGGTCTTTCGTGTTCCAGGAGCTTCCAAGCCACCCGAACAGTACTCGAC
ACTCTAGACTCTCCCTTGATTAAGCATATCTTGTTCTAATCAAGTTCGAC
TTCTTCTTCCTGGTGGGCTTTATCATTCAGTATGACCTCGTTGACGTCCA
CTTTGAGGAGCCCGAGTACTCCTTGACATTAGCACTCATTCCAGCCGCAT
TGCTGGTGATGACTGTGGGCACATATTTTGTCCGACGTGAACACAGAATT
TCTACCATCATTATTGCAATATAACCTCATTCAGTGGCAATCATGGACGA
ATCCCAATGCCACTCAGGTCGCCATATCATACCAGGTCCCCATCAACATT
GCACTCATCATGTTTGCTGTCGTTTATGAGATATTTCTTGGCCTTGACAT
GGTACATCATAAGAATATTATATTGCTTCTAGCCCTTTGCATTAGCAATG
GCTGTGTCCTCGCCTATTCTGTGATGCAGTACATGTCTATTCATCATACC
ACCTTGACTATTGGAGAGAACCGCGACTATCTCGGCCGACCATTGGTGGA
CTTATCAAGAGACCTGTGGAAAGAAATCCAGCCTGCTGAGCTTCTGGTTC
CCATCACCGTCAGTATTGCGACGCTCTTTATGTGGCCGATCGCGTATTGG
GTCCATAGAGAATTTTCCTGGGCTATATACCAGTATGTTCAGGGGAGCCC
TAAGAGTCGTAAACAATATCGAGGATATGAGATGTACTGGCCAACTTCGC
AAAACGAAAAATGGTTCTGCGGAACACTGTTCGTGCAAGGACTGCTTGTT
CTCGTGTTGAACATGTCTGCCGTCTAGGCATTGCGGCCTATTTACTGAGT
CGGATCATCGTTCTATGTGGAAATACTTTGCGTGGCAACACACCAGGGAA
GGACATGATGCTGCTCTTTGCCAGTGTAGCATTTGTCCTTTCCTGCCTTA
TCATTGTATGCACGGTATATTGCATACTGAACTTTGAACATGGTCTCAAG
TCGGTGTTTGCCCGGAAGAATCAAGTCGCTCAGCGGTCTTTCGTGTTCCA
GGAGCTTCCAAGCCACCCGAACAGTACTCGACACTCTAGACTCTCCCTTG
ATTAAGCATATCTTGTTCTAATCAAGTTCGACTTCTTCTTCCTGGTGGGC
TTTATCATTCAGTATGACCTCGTTGACGTCCACTTTGAGGAGCCCGAGTA
CTCCTTGACATTAGCACTCATTCCAGCCGCATTGCTGGTGATGACTGTGG
GCACATATTTTGTCCGACGTGAACACAGAATTTCTACCATCATTATTGCA
ATATAACCTCATTCAGTGGCAATCATGGACGAATCCCAATGCCACTCAGG
TCGCCATATCATACCAGGTCCCCATCAACATTGCACTCATCATGTTTGCT
GTCGTTTATGAGATATTTCTTGGCCTTGACATGGTACATCATAAGAATAT
TATATTGCTTCTAGCCCTTTGCATTAGCAATGGCTGTGTCCTCGCCTATT
CTGTGATGCAGTACATGTCTATTCATCATACCACCTTGACTATTGGAGAG
AACCGCGACTATCTCGGCCGACCATTGGTGGACTTATCAAGAGACCTGTG
GAAAGAAATCCAGCCTGCTGAGCTTCTGGTTCCCATCACCGTCAGTATTG
CGACGCTCTTTATGTGGCCGATCGCGTATTGGGTCCATAGAGAATTTTCC
TGGGCTATATACCAGTATGTTCAGGGGAGCCCTAAGAGTCGTAAACAATA
TCGAGGATATGAGATGTACTGGCCAACTTCGCAAAACGAAAAATGGTTCT
GCGGAACACTGTTCGTGCAAGGACTGCTTGTTCTCGTGTTGAACATGTCT
GCCGTCTAGGCATTGCGGCCTATTTACTGAGTCGGATCATCGTTCTATGT
GGAAATACTTTGCGTGGCAACACACCAGGGAAGGACATGATGCTGCTCTT
TGCCAGTGTAGCATTTGTCCTTTCCTGCCTTATCATTGTATGCACGGTAT
ATTGCATACTGAACTTTGAACATGGTCTCAAGTCGGTGTTTGCCCGGAAG
AATCAAGTCGCTCAGCGGTCTTTCGTGTTCCAGGAGCTTCCAAGCCACCC
GAACAGTACTCGACACTCTAGACTCTCCCTTGATTAAGCATATCTTGTTC
TAATCAAGTTCGACTTCTTCTTCCTGGTGGGCTTTATCATTCAGTATGAC
CTCGTTGACGTCCACTTTGAGGAGCCCGAGTACTCCTTGACATTAGCACT
CATTCCAGCCGCATTGCTGGTGATGACTGTGGGCACATATTTTGTCCGAC
GTGAACACAGAATTTCTACCATCATTATTGCAATATAACCTCATTCAGTG
GCAATCATGGACGAATCCCAATGCCACTCAGGTCGCCATATCATACCAGG
TCCCCATCAACATTGCACTCATCATGTTTGCTGTCGTTTATGAGATATTT
CTTGGCCTTGACATGGTACATCATAAGAATATTATATTGCTTCTAGCCCT
TTGCATTAGCAATGGCTGTGTCCTCGCCTATTCTGTGATGCAGTACATGT
CTATTCATCATACCACCTTGACTATTGGAGAGAACCGCGACTATCTCGGC
CGACCATTGGTGGACTTATCAAGAGACCTGTGGAAAGAAATCCAGCCTGC
TGAGCTTCTGGTTCCCATCACCGTCAGTATTGCGACGCTCTTTATGTGGC
CGATCGCGTATTGGGTCCATAGAGAATTTTCCTGGGCTATATACCAGTAT
GTTCAGGGGAGCCCTAAGAGTCGTAAACAATATCGAGGATATGAGATGTA
CTGGCCAACTTCGCAAAACGAAAAATGGTTCTGCGGAACACTGTTCGTGC
AAGGACTGCTTGTTCTCGTGTTGAACAT back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005987-T2.utr5p1 | KJC3_005987-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4325188..4326385 - |
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