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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4336865..4339601+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005991-T1 ID=KJC3_005991-T1|Name=KJC3_005991-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2737bp|location=Sequence derived from alignment at ch4:4336865..4339601+ (Aspergillus niger KJC3)
AGTAGTGTTGTTTTTTCTTTTTCATGCAGTCCCTAGGTCTTGGGGTTTAA
TTCTTCTGGGTTGTTTCTTCTACACTCGATTCTCTGAGACTTTCTTTCCT
TTCTACTCTTCTCTCTTTTCGTTGCTCGCACCCATCCTTCTCTCGCACCC
CTCTTGCACTCTTTTGTTTTTTGGTTAACTATTCTCGATTTATCTATCAG
ACTCGCCCGGGCGGTTGGTGTTCGTTATCAGGAGTTCTTGTTGATCACAT
CGGTCTTTTCCTTGGCCACTCGAGCTGCTAGCCTGTCGATTTTTCCCCTT
ACCTACGCCATTCAGCCTCTCGATACCGCCTTATATCCCCTATTGACGCA
TCACATATTTCTTCCTTGACCAGCAGCGTTACCCTTGCGTCTGACCCCTG
AGGGTGTGTCTCAGCCGCGCTAAGGGAATTAACTCGATTCCTATACTATA
ACAATCTACCGAGAACGCTCTGTCCTAAGTGTCCCCCGCGTGGCTGGCCT
TAATTGAGATTGTCACTGTGACATCGATCGCCGTCATGGCTCCACGAGAC
TCTAGCACTATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCG
GCCTCGAACTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATG
ACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGC
CAGGTCGTGGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCG
TGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAG
CTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCAT
TCTGTTCATCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAAC
TAGCATTAATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTT
TCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCT
GTTTTCTCGAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGC
AGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGG
ATGCGAGATTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGC
GATCGCTCAGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCC
TGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCG
ATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAG
CAGGCATCCTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGG
ACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGG
GTAAGACTCATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGT
GCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCA
TGGCCATAAGGACAGTGTCTACTGTGCGCAATTTGATGAGTAAGTTACTC
GTTGGTAAACATCTGCATATAAGCTCTTTTTAATTATACCCCAGGGACAA
AATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGGGACGCTCATT
ACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCC
GGTATTGGTCCGGTCAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCC
CTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTC
CCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAG
TTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGT
GTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATC
AGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGC
TCCAAAGACACTACAATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGT
GAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCG
GAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAAC
ATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACT
GGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCA
ACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGACATGGTCAAT
GAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTAT
GAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCG
ATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGC
TGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCA
AGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTAGATGGCATAG
ACTTGCTGAAAGAGTAATATATCTGGCTAGACATTTTGCGTTTCGCTTAT
TTGCTGGGAAAAAGTCTCGGTTTGGAGTTTTCTGGGATATTCAGGTTCGC
TTCTTGGGTTTATTAGCAGGGACATACATTGGCTAGCGATAGATGCTTAT
ACATTTGCTCAATTAATTTATTTGCTCGGAATTTTCA back to topCoding sequence (CDS) from alignment at ch4:4336865..4339601+ >KJC3_005991-T1 ID=KJC3_005991-T1|Name=KJC3_005991-T1|organism=Aspergillus niger KJC3|type=CDS|length=3954bp|location=Sequence derived from alignment at ch4:4336865..4339601+ (Aspergillus niger KJC3)
ATGGCTCCACGAGACTCTAGCACTATTACGTCCCGTCGACGCCCCTCTTT
CTCCCTCCGCACTCGGCCTCGAACTGCTACGACCTCAACCGCTCATACAA
CCGGATTGGAACATGACGTGTGGCACGGGCTGTCTGTGGTGGATTCGGGA
GATGATGATGACGGCCAGGTCGTGGAGGATATGAACCATTTTCCAGAGCC
TGTCCCTAGGCGCCGTGAAGCAAAGAGCTTCTCTAGCTTACGCCATCCCG
TGGACGGTCTGCGAGCTCTGGGTCGTCGCCTCTCGGTGACGCTCCGCAAC
AAGTCGTCCAGGCATTCTGTTCATCCTCAACCAGAAACCATGAGAAATTC
CTGGTGCAATGAAACTAGCATTAATCGTCGACCATCCCTGGAAAGCATCT
CCGCGCTGCACGGTTTCTACGCCCATGCTGGCGCCCCTGTTCCTGGAAAT
GGCCTGGAGCCACCTGTTTTCTCGAATGACATTTATGCGGGAGCGGCAGC
TCGCGCTGCAGCTGCAGCTCAGAATGAGCTGGCAAGAGCTCTGCGGGACA
GTATCAAGCTCTCGGATGCGAGATTGACTCAAGACTCGGAAAGTGGCATT
GGAATCGATCTACGCGATCGCTCAGAGCTATCTGACCCAGCCCTGGCTAT
AGTACGGATTGATCCTGTTGGCTGCCTTCCTCCTGAGGTCATGTCACAAG
TGTTCTCCTACCTCGATCCCGAGTCCCTTATGCAGTCTGAGCTGGTTTCT
CGTGCTTGGAGTGAGCAGGCATCCTCCCGGCACATCTGGCGGCACGTGTT
CCGCCATACTTACGGACAACACCCTAGCGGGCTCCCTTTCAAGAAGAGAC
AATCTGCTGGTTTGGGTAAGACTCATCCCAAGCAGGATTGGAAGCGGATG
TTCCTGGTTCGCCGTGCTTTGGAACATCGGTGGAAGGAAGGAAAGGCCGC
TGCTATCTACCTTCATGGCCATAAGGACAGTGTCTACTGTGCGCAATTTG
ATGAGGACAAAATCATCACTGGCTCTCGCGATCGAACCATTCGTGTATGG
GACGCTCATTACCCTTGGCCATGCCGGAAGATCATTGGCCCTCCCCCGGG
CGATGTCTCCGGTATTGGTCCGGTCAATAACCCGGCGCAGCAATCAGCCG
GAAAGCCGCCCTTCTTGACCATCTGCCCCCCGCCGACGCGTTCTGCGGGG
ATCATGGCTCCCATTGAGCACAGCGCAGACTATCACAGTGCTTCCATTCT
CTGCCTCCAGTTTGACGAAGAAATCATGGTCACCGGTTCGTCTGATTTTA
CCTGCATTGTGTGGGATATCAAGAACGACTACAAGCCGATTCGTCGCCTT
GTGGGCCATCAGGCAGGAGTGCTGGATGTCTGCTTTGATGACCGGTACAT
TGTGTCCTGCTCCAAAGACACTACAATTTGTGTGTGGGATCGGCACACAG
GGGCCTTGGTGAAGAAACTCCTTGGCCACAGAGGTCCAGTGAACGCTGTT
CAGCTGCGCGGAGATCTTGTCGTTTCTGCAAGCGGGGACGGCGTCGCCAA
GCTCTGGAACATCACTTCTGGCCTTTGTGTCAAGGAGTTTCCCAGCAAGG
ACCGTGGACTGGCATGTGTTGAATTCAGCGATGATGCTCGAACCATTCTC
ACTGGCGGCAACGATCAAGTGATCTATCAGTTTGACGCCAATACCGGCGA
CATGGTCAATGAGCTCAAGGGCCACGCGGGCTTGGTTCGCTCCTTGCACC
TCGACAGTATGAACCAAAGAATCGTCAGTGGTAGCTATGACATGAGTGTT
AAAGTATTCGATGCTCAAAGTGGCGAGCTATCCATTGACCTTCCGGGCTG
GACAACGAGCTGGATGCTCAGCGTCAAGTCCGATTATCGGCGCATTGTGG
CTACCAGCCAAGACTCTCGCGCTGTCATAATGGATTTTGGATACGGACTA
GATGGCATAGACTTGCTGAAAGAGTAAATGGCTCCACGAGACTCTAGCAC
TATTACGTCCCGTCGACGCCCCTCTTTCTCCCTCCGCACTCGGCCTCGAA
CTGCTACGACCTCAACCGCTCATACAACCGGATTGGAACATGACGTGTGG
CACGGGCTGTCTGTGGTGGATTCGGGAGATGATGATGACGGCCAGGTCGT
GGAGGATATGAACCATTTTCCAGAGCCTGTCCCTAGGCGCCGTGAAGCAA
AGAGCTTCTCTAGCTTACGCCATCCCGTGGACGGTCTGCGAGCTCTGGGT
CGTCGCCTCTCGGTGACGCTCCGCAACAAGTCGTCCAGGCATTCTGTTCA
TCCTCAACCAGAAACCATGAGAAATTCCTGGTGCAATGAAACTAGCATTA
ATCGTCGACCATCCCTGGAAAGCATCTCCGCGCTGCACGGTTTCTACGCC
CATGCTGGCGCCCCTGTTCCTGGAAATGGCCTGGAGCCACCTGTTTTCTC
GAATGACATTTATGCGGGAGCGGCAGCTCGCGCTGCAGCTGCAGCTCAGA
ATGAGCTGGCAAGAGCTCTGCGGGACAGTATCAAGCTCTCGGATGCGAGA
TTGACTCAAGACTCGGAAAGTGGCATTGGAATCGATCTACGCGATCGCTC
AGAGCTATCTGACCCAGCCCTGGCTATAGTACGGATTGATCCTGTTGGCT
GCCTTCCTCCTGAGGTCATGTCACAAGTGTTCTCCTACCTCGATCCCGAG
TCCCTTATGCAGTCTGAGCTGGTTTCTCGTGCTTGGAGTGAGCAGGCATC
CTCCCGGCACATCTGGCGGCACGTGTTCCGCCATACTTACGGACAACACC
CTAGCGGGCTCCCTTTCAAGAAGAGACAATCTGCTGGTTTGGGTAAGACT
CATCCCAAGCAGGATTGGAAGCGGATGTTCCTGGTTCGCCGTGCTTTGGA
ACATCGGTGGAAGGAAGGAAAGGCCGCTGCTATCTACCTTCATGGCCATA
AGGACAGTGTCTACTGTGCGCAATTTGATGAGGACAAAATCATCACTGGC
TCTCGCGATCGAACCATTCGTGTATGGGACGCTCATTACCCTTGGCCATG
CCGGAAGATCATTGGCCCTCCCCCGGGCGATGTCTCCGGTATTGGTCCGG
TCAATAACCCGGCGCAGCAATCAGCCGGAAAGCCGCCCTTCTTGACCATC
TGCCCCCCGCCGACGCGTTCTGCGGGGATCATGGCTCCCATTGAGCACAG
CGCAGACTATCACAGTGCTTCCATTCTCTGCCTCCAGTTTGACGAAGAAA
TCATGGTCACCGGTTCGTCTGATTTTACCTGCATTGTGTGGGATATCAAG
AACGACTACAAGCCGATTCGTCGCCTTGTGGGCCATCAGGCAGGAGTGCT
GGATGTCTGCTTTGATGACCGGTACATTGTGTCCTGCTCCAAAGACACTA
CAATTTGTGTGTGGGATCGGCACACAGGGGCCTTGGTGAAGAAACTCCTT
GGCCACAGAGGTCCAGTGAACGCTGTTCAGCTGCGCGGAGATCTTGTCGT
TTCTGCAAGCGGGGACGGCGTCGCCAAGCTCTGGAACATCACTTCTGGCC
TTTGTGTCAAGGAGTTTCCCAGCAAGGACCGTGGACTGGCATGTGTTGAA
TTCAGCGATGATGCTCGAACCATTCTCACTGGCGGCAACGATCAAGTGAT
CTATCAGTTTGACGCCAATACCGGCGACATGGTCAATGAGCTCAAGGGCC
ACGCGGGCTTGGTTCGCTCCTTGCACCTCGACAGTATGAACCAAAGAATC
GTCAGTGGTAGCTATGACATGAGTGTTAAAGTATTCGATGCTCAAAGTGG
CGAGCTATCCATTGACCTTCCGGGCTGGACAACGAGCTGGATGCTCAGCG
TCAAGTCCGATTATCGGCGCATTGTGGCTACCAGCCAAGACTCTCGCGCT
GTCATAATGGATTTTGGATACGGACTAGATGGCATAGACTTGCTGAAAGA
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005991-T1.utr5p1 | KJC3_005991-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005991-T1.utr3p1 | KJC3_005991-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4336865..4339601 + |
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