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KJC3_005992-T1, KJC3_005992-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005992-T1
Unique NameKJC3_005992-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4339816..4341128+

Legend: five_prime_UTRexonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005992-T1 ID=KJC3_005992-T1|Name=KJC3_005992-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1313bp|location=Sequence derived from alignment at ch4:4339816..4341128+ (Aspergillus niger KJC3)
GTTTTTCTTCGATATTAACAAGAGATCCAGCGCTACAGGGTGTTTCCCTT
TGTTACTAATTCTTATTTCAACTCCCCTCCAATATTTGCAACCCCCTGCC
AAACCCTGCATTCCTTCTAGCCCGGCATTCAGCCTTCCCTTACAACTACT
TACCCCACTATGTCGGAATCCAGGTTCGTCGGGCATCTGCCTCTGTTCTA
GGACGGCTTGTTATTCCTTTGCACCCATGGCTAACAATCCAGGATAACAG
ACAAGAGTTGTTGGCATGGATCAACAACCTGCTGCAGTTGAACATGACCA
AGGTTGAGCAGTGCGGAACTGGGTAGGAACCTCCCTGACCGACGTGGAAA
GTCGCTTGCAACAGACGCCTTAGTAGCGCTTTCAACAAACAATTAGGCAT
GTCTTAGGCCCATAGGCTGACGGAGTGATTGTACAGTGCCGCTCTGTGCC
AGATCTTCGATTCGATATTCAGTGAGTTGGCGTGATGAGCTCACCCCTTT
TTTCCACCCCCGCCTGGACATGTGGCTTACTAGTTGCCTTCTAGTGGATG
TCCCGATGTCTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTACCTT
CAGAACTTCAAGGTTCTTCAGAGTACGCCTCTTCCGAACGAATTGTGGTT
TGGGAACGCTGTTTCCGTTAACACAGGACTGTTTAGACGTCTTTGCCAAA
CACCAGGTGGACAAGCCGATTCCGGTCGAATCTCTCACGAAATGCCGTAT
GCAGGACAACCTTGAGTTCCTTCAGTGGACGAAGAAGTACTGGGACCAAC
ACTACCCGGGTGGTGACTACGATGCGGTCGCTCGTCGCAAGGCCTCTGGT
GGCCCCCCGGCCGCTGCGGGTGGCTCTCGCGCAGGTGCAAGCTCCGCCGG
TGCGGCGCGCCGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCCGTG
TCGCTGGTGCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAGATT
GCTACGCAAAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTA
CTTTGCCAAGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCGAGG
CCGATCCGGAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATCCAG
GGCATTCTGTACTCGACGGAGGTATGATTCCACACTAGCCGGACCTCTTT
TGTTGCATGTCAAGGAGGCTTCTCATTCCCGAATCCGTGGTTAACATGTG
TTGCAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAACT
TGAGACCTTCTAA
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Coding sequence (CDS) from alignment at ch4:4339816..4341128+

>KJC3_005992-T1 ID=KJC3_005992-T1|Name=KJC3_005992-T1|organism=Aspergillus niger KJC3|type=CDS|length=1362bp|location=Sequence derived from alignment at ch4:4339816..4341128+ (Aspergillus niger KJC3)
ATGTCCCGATGTCTCGCGTCAAGTTCAACGTCAACACCGAATACGCCTAC
CTTCAGAACTTCAAGGTTCTTCAGAGTACGCCTCTTCCGAACGAATTGTG
GTTTGGGAACGCTGTTTCCGTTAACACAGGACTGTTTAGACGTCTTTGCC
AAACACCAGGTGGACAAGCCGATTCCGGTCGAATCTCTCACGAAATGCCG
TATGCAGGACAACCTTGAGTTCCTTCAGTGGACGAAGAAGTACTGGGACC
AACACTACCCGGGTGGTGACTACGATGCGGTCGCTCGTCGCAAGGCCTCT
GGTGGCCCCCCGGCCGCTGCGGGTGGCTCTCGCGCAGGTGCAAGCTCCGC
CGGTGCGGCGCGCCGTGGTACTACGCCTACTATTGGCGCCGCCCGCCCCC
GTGTCGCTGGTGCCGCAAGCGCTGCCAACGTATCTGCGCTGCAGCAGGAG
ATTGCTACGCAAAAGGAGGCTATTGCTGGCTTGGAGAAGGAGAGGGACTT
CTACTTTGCCAAGCTGCGTGACATCGAATTGCTTTTGCAGAGCGCCATCG
AGGCCGATCCGGAGCTTGAGAAGGATGACGACTCGCTGGTGAAGCACATC
CAGGGCATTCTGTACTCGACGGAGGAGGGATTCGAGATTCCCGAAGCGGA
GGCTGGGGCGGATGAACTTGAGACCTTCTAAATGTCCCGATGTCTCGCGT
CAAGTTCAACGTCAACACCGAATACGCCTACCTTCAGAACTTCAAGGTTC
TTCAGAGTACGCCTCTTCCGAACGAATTGTGGTTTGGGAACGCTGTTTCC
GTTAACACAGGACTGTTTAGACGTCTTTGCCAAACACCAGGTGGACAAGC
CGATTCCGGTCGAATCTCTCACGAAATGCCGTATGCAGGACAACCTTGAG
TTCCTTCAGTGGACGAAGAAGTACTGGGACCAACACTACCCGGGTGGTGA
CTACGATGCGGTCGCTCGTCGCAAGGCCTCTGGTGGCCCCCCGGCCGCTG
CGGGTGGCTCTCGCGCAGGTGCAAGCTCCGCCGGTGCGGCGCGCCGTGGT
ACTACGCCTACTATTGGCGCCGCCCGCCCCCGTGTCGCTGGTGCCGCAAG
CGCTGCCAACGTATCTGCGCTGCAGCAGGAGATTGCTACGCAAAAGGAGG
CTATTGCTGGCTTGGAGAAGGAGAGGGACTTCTACTTTGCCAAGCTGCGT
GACATCGAATTGCTTTTGCAGAGCGCCATCGAGGCCGATCCGGAGCTTGA
GAAGGATGACGACTCGCTGGTGAAGCACATCCAGGGCATTCTGTACTCGA
CGGAGGAGGGATTCGAGATTCCCGAAGCGGAGGCTGGGGCGGATGAACTT
GAGACCTTCTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0008017microtubule binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005992KJC3_005992Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005992-T1KJC3_005992-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005992-T1.utr5p1KJC3_005992-T1.utr5p1Aspergillus niger KJC3five_prime_UTR
KJC3_005992-T1.utr5p2KJC3_005992-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_005992-T1.utr5p3KJC3_005992-T1.utr5p3Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005992-T1.exon1KJC3_005992-T1.exon1Aspergillus niger KJC3exon
KJC3_005992-T1.exon2KJC3_005992-T1.exon2Aspergillus niger KJC3exon
KJC3_005992-T1.exon3KJC3_005992-T1.exon3Aspergillus niger KJC3exon
KJC3_005992-T1.exon4KJC3_005992-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005992-T1.cdsKJC3_005992-T1.cdsAspergillus niger KJC3CDS


Properties
Property NameValue
DBxrefInterPro:IPR036133
DBxrefInterPro:IPR004953
DBxrefInterPro:IPR036872
DBxrefInterPro:IPR042180
DBxrefPFAM:PF03271
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4339816..4341128 +
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