|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4347818..4349461+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_005994-T1 ID=KJC3_005994-T1|Name=KJC3_005994-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1644bp|location=Sequence derived from alignment at ch4:4347818..4349461+ (Aspergillus niger KJC3)
CCTCTCCTACTTCCACTTCCATTTTCTCAACTCACCATGAAAGAACCTGT
CATTCCAGCTTCCTCTCCCTTTCCACCAGCCTCTCCCCGTCCTCTCCGCT
TCCTCATAATAGGTGCCGGATCTCGTGGGACCGCCTACGCCCGTGCCGTA
GCCACCGCTACTCAAGGCACCATCCACGCCGTCGCCGAACCCCACCCCTC
CAAGCGCCGACACCTCGGCCGCTCCTACATCTGGGGCGAACACGGCACTC
CCCAAGACGGCCAGGAATTCCCCGACTGGCGCGCCTGGCTACAATGGGAG
CAGCAGCGCCGAGAAACCAAGAATGACTCCCAAGTCGGTGTCGACGGGGT
CTTCATCTGCACCCTTGACTCCACCCACGTCGAGATCCTCCACGCCATCG
CCCCTCTCCAACTCCACATCCTCTGCGAGAAGCCTCTCGCCCTATCCCTA
GAGGACTGTCTGTCCGTCTATCACGCCCTCACCCCCAATCTCTCTACCAA
CATCTTCTCCATCGGCCATGTCCTCCGCTACAGCCCGCACAACATCCTCC
TCCGCAAACTCCTCCTTCTCGACCGCGTCATCGGCGACATCGTCTCCCTC
GAGCACACCGAACCCGTCGGCTTCTGGCACTTTTCGCACAGCTATGTGCG
CGGCAACTGGCGTCGAGAAACCCCCAACGGGGACGGCTCCCTGCTAACTA
AATCCTGCCACGACATCGACTTCATCATGTGGTTACTCTCCAGTCCTCCT
CCTTCCTCAGACCCAACCTCGCAACAACCCATCCATCCCCGAACCATCAC
CTCCACCGGCTCCCTAACCCAGTTCCGCAAATCCCAAAAGCCTCCCGCCG
CAGGCACCGCAACAAACTGTCTATCCTGTCCCGCAGAACGAGATTGCATC
TACAGCGCCGTCCGAATCTACAACGACATGCACGTCGCAAAGGGCGACAT
AGACTGGCCCGTGAACATCGTCTGCGAAGACATCGAAGATATCCTCCCTA
AAACAACCACCCCTAGAATTAACAAATCCGACCCCATCCCCACCGAGCAC
ATCCCCCTGGCTCAATCCCACCTCCTTACCCGCCTCCGCGAAGACTACCA
AACCTCCAACAACACCACCGATGAAAAGGAATCCATCCACTCCCGCCCGT
GGTACGGCCGCTGTGTCTACGAATCCGACAACAACGTCTGCGACGATCAA
ACCGTAACGATAACCTTCTCGTCGGACCCACCCAAAACCGCTCTTTTCCA
CATGATCGCACCGACCGAGAAGCAATGCGAGCGACGCGGCCGCGTGTACG
GCACGCTCGGCGAGATTAGCTACGATAGCCGCACAATTACTATCTACTCG
TTCCAGACAAGGGAGACTACGACAATCACAGTGCCGAAGAGGCCGGCGGA
GGAGGAGAAGGCGCATGGCGGAGGGGATTATGGGCTTGCGAGGAGCTTCG
TCGATGCTGTCGATGCGGTGGTCAAGAAGGGGTGGGGGGTGGCGGAGGCA
CAGAGGAGGTTCGTTGGGTGTGATCTGGAGGAGGCGGTTAGGAGTCATGC
GGTGGTGTTTGCGGCGGAGGAGGCAAGGAGGGAGGAGGTGGTTGTTAAGT
GGGGGGAGTGGTGGGGGGAGAAGGTCAAAGGGGTGAGTAAGTAG back to topCoding sequence (CDS) from alignment at ch4:4347818..4349461+ >KJC3_005994-T1 ID=KJC3_005994-T1|Name=KJC3_005994-T1|organism=Aspergillus niger KJC3|type=CDS|length=1608bp|location=Sequence derived from alignment at ch4:4347818..4349461+ (Aspergillus niger KJC3)
ATGAAAGAACCTGTCATTCCAGCTTCCTCTCCCTTTCCACCAGCCTCTCC
CCGTCCTCTCCGCTTCCTCATAATAGGTGCCGGATCTCGTGGGACCGCCT
ACGCCCGTGCCGTAGCCACCGCTACTCAAGGCACCATCCACGCCGTCGCC
GAACCCCACCCCTCCAAGCGCCGACACCTCGGCCGCTCCTACATCTGGGG
CGAACACGGCACTCCCCAAGACGGCCAGGAATTCCCCGACTGGCGCGCCT
GGCTACAATGGGAGCAGCAGCGCCGAGAAACCAAGAATGACTCCCAAGTC
GGTGTCGACGGGGTCTTCATCTGCACCCTTGACTCCACCCACGTCGAGAT
CCTCCACGCCATCGCCCCTCTCCAACTCCACATCCTCTGCGAGAAGCCTC
TCGCCCTATCCCTAGAGGACTGTCTGTCCGTCTATCACGCCCTCACCCCC
AATCTCTCTACCAACATCTTCTCCATCGGCCATGTCCTCCGCTACAGCCC
GCACAACATCCTCCTCCGCAAACTCCTCCTTCTCGACCGCGTCATCGGCG
ACATCGTCTCCCTCGAGCACACCGAACCCGTCGGCTTCTGGCACTTTTCG
CACAGCTATGTGCGCGGCAACTGGCGTCGAGAAACCCCCAACGGGGACGG
CTCCCTGCTAACTAAATCCTGCCACGACATCGACTTCATCATGTGGTTAC
TCTCCAGTCCTCCTCCTTCCTCAGACCCAACCTCGCAACAACCCATCCAT
CCCCGAACCATCACCTCCACCGGCTCCCTAACCCAGTTCCGCAAATCCCA
AAAGCCTCCCGCCGCAGGCACCGCAACAAACTGTCTATCCTGTCCCGCAG
AACGAGATTGCATCTACAGCGCCGTCCGAATCTACAACGACATGCACGTC
GCAAAGGGCGACATAGACTGGCCCGTGAACATCGTCTGCGAAGACATCGA
AGATATCCTCCCTAAAACAACCACCCCTAGAATTAACAAATCCGACCCCA
TCCCCACCGAGCACATCCCCCTGGCTCAATCCCACCTCCTTACCCGCCTC
CGCGAAGACTACCAAACCTCCAACAACACCACCGATGAAAAGGAATCCAT
CCACTCCCGCCCGTGGTACGGCCGCTGTGTCTACGAATCCGACAACAACG
TCTGCGACGATCAAACCGTAACGATAACCTTCTCGTCGGACCCACCCAAA
ACCGCTCTTTTCCACATGATCGCACCGACCGAGAAGCAATGCGAGCGACG
CGGCCGCGTGTACGGCACGCTCGGCGAGATTAGCTACGATAGCCGCACAA
TTACTATCTACTCGTTCCAGACAAGGGAGACTACGACAATCACAGTGCCG
AAGAGGCCGGCGGAGGAGGAGAAGGCGCATGGCGGAGGGGATTATGGGCT
TGCGAGGAGCTTCGTCGATGCTGTCGATGCGGTGGTCAAGAAGGGGTGGG
GGGTGGCGGAGGCACAGAGGAGGTTCGTTGGGTGTGATCTGGAGGAGGCG
GTTAGGAGTCATGCGGTGGTGTTTGCGGCGGAGGAGGCAAGGAGGGAGGA
GGTGGTTGTTAAGTGGGGGGAGTGGTGGGGGGAGAAGGTCAAAGGGGTGA
GTAAGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_005994-T1.utr5p1 | KJC3_005994-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR000683 |
| DBxref | PFAM:PF01408 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4347818..4349461 + |
|
