You are here

Home

KJC3_005995-T1, KJC3_005995-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_005995-T1
Unique NameKJC3_005995-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4349430..4351633-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_005995-T1 ID=KJC3_005995-T1|Name=KJC3_005995-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2204bp|location=Sequence derived from alignment at ch4:4349430..4351633- (Aspergillus niger KJC3)
CCCTTCTCCTGCTCCTTTTCTCCCCCTGTTTCTCGCTTCAATTGTCGGTG
AGCTTCTCTCCCGACTGTTCTATATCTTCCCGTCCATACCCCTCCAGCTT
CCCCTCCCTCTCTTTTTCTATCCGTACCATCTCTATATCCCCTCCCACAA
TGTCCGTCCAGACCGTCTCCATTACTCCCTTCACCGACCAGAAGCCGGGA
ACGTAAGTACCTTGTTGTCTCCACTTGCTTCCATCTTCTCTGGCTATAAA
TTGTTCTTAACTCTGACAACACCAGCTCCGGTCTTCGTAAGAAGGTCAAG
GTCTTCCAGCAGGCCAACTACTCCGAATCCTTCGTTACTAGCATCATCCT
CTCCATCCCCGAGGGCGCTGAGGGCGCTTTCCTCGTCATCGGTGGCGATG
GCCGCTACTACAACACCGAGGTCATCCAGAAGATTGCTAAAATCGGTGCC
GCTTATGGTGTCAAGAAGCTGCTGGTCGGCCAGAATGGCATCCTCTCCAC
CCCCGCTGCCAGTAACCTCATCCGCAAGCGCAAGGCCACCGGTGGTATCC
TCCTGACGGCCAGTCACAACCCTGGTGGTACGTAATCTAGCATTCAAATT
CACCGACCCCACGCTGACATTATTCTGTTACTCAGGCCCTGAGAACGACT
TCGGTATCAAGTACAACCTTGCCAATGGCGCTCCTGCCCCCGAATCCGTC
ACCAACAAGATCTTCGAAACATCCAAGTCCCTCACCTCCTACAAGTACAT
TGACATCCCCGATGTTGACACCACCACCATCGGCTCCAAGACCTACGGCC
CCATCGAGGTTGAGGTCGTCCACTCCACCACCGACTACGTCACCATGATG
AAGGAGATCTTCGACTTCGACCTCATCCGCGACTTCCTCAAGACTCACAA
GGACTTCAAGGTGCTGTTCGATGGTATGCACGGTGTTACTGGCCCCTACG
GTGTTGACATCTTCGTCAACGAGCTGGGTCTGCCCGCTAGCAGCACCATG
AACTGCGAGCCCAAGCCCGACTTCGGCGGTGGCCACCCCGACCCCAACCT
GGTTTACGCCCACGAGCTCGTCGAGAGCGTTGACAAGAATGGCATCCACT
TCGGTGCTGCCAGTGATGGTGACGGTGACCGTAACATGATCTACGGCGCC
AACACCTTCGTCTCCCCCGGTGACAGTCTGGCCATCATTGCCCACCACGC
CAAGCTCATCCCATACTTCCAGAAGCAGGGCGTCTACGGCCTGGCGCGCT
CCATGCCCACCTCCGGTGCTGTCGACCGCGTGGCCAAGGCCCAGGGCCTG
CAGAGCTACGAGGTCCCCACGGGCTGGAAGTTCTTCTGCAACTTGTTCGA
CAACCAGAAGATCTCCATCTGTGGTGAGGAGAGTTTCGGTACTGGCAGCA
ACCACATCCGTGAGAAGGACGGCCTGTGGGCCATTGTGGCCTGGCTGAAC
GTCATCGCTGGCGTTGCCAAGCAGAAGCCCAGCGAGACCCCCAGCATCGC
TTCCATCCAGAACGAGTTCTGGCAGACCTACGGCCGTACCTTCTTCACCC
GGTACGACTACGAGAACGTCGACAGCGACGGCGCCAACAAGGTGATCGCC
ACGCTGTCGGAGAAGGTCGACAACAAGGACACCTTCGTTGGCTCGACCGT
GTCCGGCCGCAAGGTCGTCGACGTCGGCAACTTCGCCTACACCGACTTGG
ACGGCAGCGTGACCAAGAACCAGGGTCTGTACGTCAAGTTCGATGACGGC
AGCCGCATCGTCGTCCGTCTGTCTGGCACTGGCAGCAGCGGCGCCACGAT
CCGTCTGTACATCGAGAAGTACGAGAACGACGCCAGCAAGCTCGGTCTCG
CCACGGATGAGTACCTGAAGGACAACGTGGCTCTGGCTCTGGAGCTGCTC
AAGTTCAAGGAGTACATTGGCCGTGAGGAGCCTGATGTCCGCACTTAAGC
AGATAGCATTATGTTAATAGCGGTTTTTTGATTAGCTTAATAAGGAATAA
TCAGTATATTTCTCTTCACATAAACCTGTCTTATCCTATCTTCCATCCTT
AGACAACCAACCATTATATATATGAACCCTGTCCATGAACCCAACTCCAT
AATAACATGAACGAAATCATACTCTCATAACGTCATACTAGACTTCATAA
CCCAACCAACCCACCTGACAAACTACTTACTCACCCCTTTGACCTTCTCC
CCCC
back to top

Coding sequence (CDS) from alignment at ch4:4349430..4351633-

>KJC3_005995-T1 ID=KJC3_005995-T1|Name=KJC3_005995-T1|organism=Aspergillus niger KJC3|type=CDS|length=5004bp|location=Sequence derived from alignment at ch4:4349430..4351633- (Aspergillus niger KJC3)
GCCCTGAGAACGACTTCGGTATCAAGTACAACCTTGCCAATGGCGCTCCT
GCCCCCGAATCCGTCACCAACAAGATCTTCGAAACATCCAAGTCCCTCAC
CTCCTACAAGTACATTGACATCCCCGATGTTGACACCACCACCATCGGCT
CCAAGACCTACGGCCCCATCGAGGTTGAGGTCGTCCACTCCACCACCGAC
TACGTCACCATGATGAAGGAGATCTTCGACTTCGACCTCATCCGCGACTT
CCTCAAGACTCACAAGGACTTCAAGGTGCTGTTCGATGGTATGCACGGTG
TTACTGGCCCCTACGGTGTTGACATCTTCGTCAACGAGCTGGGTCTGCCC
GCTAGCAGCACCATGAACTGCGAGCCCAAGCCCGACTTCGGCGGTGGCCA
CCCCGACCCCAACCTGGTTTACGCCCACGAGCTCGTCGAGAGCGTTGACA
AGAATGGCATCCACTTCGGTGCTGCCAGTGATGGTGACGGTGACCGTAAC
ATGATCTACGGCGCCAACACCTTCGTCTCCCCCGGTGACAGTCTGGCCAT
CATTGCCCACCACGCCAAGCTCATCCCATACTTCCAGAAGCAGGGCGTCT
ACGGCCTGGCGCGCTCCATGCCCACCTCCGGTGCTGTCGACCGCGTGGCC
AAGGCCCAGGGCCTGCAGAGCTACGAGGTCCCCACGGGCTGGAAGTTCTT
CTGCAACTTGTTCGACAACCAGAAGATCTCCATCTGTGGTGAGGAGAGTT
TCGGTACTGGCAGCAACCACATCCGTGAGAAGGACGGCCTGTGGGCCATT
GTGGCCTGGCTGAACGTCATCGCTGGCGTTGCCAAGCAGAAGCCCAGCGA
GACCCCCAGCATCGCTTCCATCCAGAACGAGTTCTGGCAGACCTACGGCC
GTACCTTCTTCACCCGGTACGACTACGAGAACGTCGACAGCGACGGCGCC
AACAAGGTGATCGCCACGCTGTCGGAGAAGGTCGACAACAAGGACACCTT
CGTTGGCTCGACCGTGTCCGGCCGCAAGGTCGTCGACGTCGGCAACTTCG
CCTACACCGACTTGGACGGCAGCGTGACCAAGAACCAGGGTCTGTACGTC
AAGTTCGATGACGGCAGCCGCATCGTCGTCCGTCTGTCTGGCACTGGCAG
CAGCGGCGCCACGATCCGTCTGTACATCGAGAAGTACGAGAACGACGCCA
GCAAGCTCGGTCTCGCCACGGATGAGTACCTGAAGGACAACGTGGCTCTG
GCTCTGGAGCTGCTCAAGTTCAAGGAGTACATTGGCCGTGAGGAGCCTGA
TGTCCGCACTTAACTCCGGTCTTCGTAAGAAGGTCAAGGTCTTCCAGCAG
GCCAACTACTCCGAATCCTTCGTTACTAGCATCATCCTCTCCATCCCCGA
GGGCGCTGAGGGCGCTTTCCTCGTCATCGGTGGCGATGGCCGCTACTACA
ACACCGAGGTCATCCAGAAGATTGCTAAAATCGGTGCCGCTTATGGTGTC
AAGAAGCTGCTGGTCGGCCAGAATGGCATCCTCTCCACCCCCGCTGCCAG
TAACCTCATCCGCAAGCGCAAGGCCACCGGTGGTATCCTCCTGACGGCCA
GTCACAACCCTGGTGATGTCCGTCCAGACCGTCTCCATTACTCCCTTCAC
CGACCAGAAGCCGGGAACGCCCTGAGAACGACTTCGGTATCAAGTACAAC
CTTGCCAATGGCGCTCCTGCCCCCGAATCCGTCACCAACAAGATCTTCGA
AACATCCAAGTCCCTCACCTCCTACAAGTACATTGACATCCCCGATGTTG
ACACCACCACCATCGGCTCCAAGACCTACGGCCCCATCGAGGTTGAGGTC
GTCCACTCCACCACCGACTACGTCACCATGATGAAGGAGATCTTCGACTT
CGACCTCATCCGCGACTTCCTCAAGACTCACAAGGACTTCAAGGTGCTGT
TCGATGGTATGCACGGTGTTACTGGCCCCTACGGTGTTGACATCTTCGTC
AACGAGCTGGGTCTGCCCGCTAGCAGCACCATGAACTGCGAGCCCAAGCC
CGACTTCGGCGGTGGCCACCCCGACCCCAACCTGGTTTACGCCCACGAGC
TCGTCGAGAGCGTTGACAAGAATGGCATCCACTTCGGTGCTGCCAGTGAT
GGTGACGGTGACCGTAACATGATCTACGGCGCCAACACCTTCGTCTCCCC
CGGTGACAGTCTGGCCATCATTGCCCACCACGCCAAGCTCATCCCATACT
TCCAGAAGCAGGGCGTCTACGGCCTGGCGCGCTCCATGCCCACCTCCGGT
GCTGTCGACCGCGTGGCCAAGGCCCAGGGCCTGCAGAGCTACGAGGTCCC
CACGGGCTGGAAGTTCTTCTGCAACTTGTTCGACAACCAGAAGATCTCCA
TCTGTGGTGAGGAGAGTTTCGGTACTGGCAGCAACCACATCCGTGAGAAG
GACGGCCTGTGGGCCATTGTGGCCTGGCTGAACGTCATCGCTGGCGTTGC
CAAGCAGAAGCCCAGCGAGACCCCCAGCATCGCTTCCATCCAGAACGAGT
TCTGGCAGACCTACGGCCGTACCTTCTTCACCCGGTACGACTACGAGAAC
GTCGACAGCGACGGCGCCAACAAGGTGATCGCCACGCTGTCGGAGAAGGT
CGACAACAAGGACACCTTCGTTGGCTCGACCGTGTCCGGCCGCAAGGTCG
TCGACGTCGGCAACTTCGCCTACACCGACTTGGACGGCAGCGTGACCAAG
AACCAGGGTCTGTACGTCAAGTTCGATGACGGCAGCCGCATCGTCGTCCG
TCTGTCTGGCACTGGCAGCAGCGGCGCCACGATCCGTCTGTACATCGAGA
AGTACGAGAACGACGCCAGCAAGCTCGGTCTCGCCACGGATGAGTACCTG
AAGGACAACGTGGCTCTGGCTCTGGAGCTGCTCAAGTTCAAGGAGTACAT
TGGCCGTGAGGAGCCTGATGTCCGCACTTAACTCCGGTCTTCGTAAGAAG
GTCAAGGTCTTCCAGCAGGCCAACTACTCCGAATCCTTCGTTACTAGCAT
CATCCTCTCCATCCCCGAGGGCGCTGAGGGCGCTTTCCTCGTCATCGGTG
GCGATGGCCGCTACTACAACACCGAGGTCATCCAGAAGATTGCTAAAATC
GGTGCCGCTTATGGTGTCAAGAAGCTGCTGGTCGGCCAGAATGGCATCCT
CTCCACCCCCGCTGCCAGTAACCTCATCCGCAAGCGCAAGGCCACCGGTG
GTATCCTCCTGACGGCCAGTCACAACCCTGGTGATGTCCGTCCAGACCGT
CTCCATTACTCCCTTCACCGACCAGAAGCCGGGAACGCCCTGAGAACGAC
TTCGGTATCAAGTACAACCTTGCCAATGGCGCTCCTGCCCCCGAATCCGT
CACCAACAAGATCTTCGAAACATCCAAGTCCCTCACCTCCTACAAGTACA
TTGACATCCCCGATGTTGACACCACCACCATCGGCTCCAAGACCTACGGC
CCCATCGAGGTTGAGGTCGTCCACTCCACCACCGACTACGTCACCATGAT
GAAGGAGATCTTCGACTTCGACCTCATCCGCGACTTCCTCAAGACTCACA
AGGACTTCAAGGTGCTGTTCGATGGTATGCACGGTGTTACTGGCCCCTAC
GGTGTTGACATCTTCGTCAACGAGCTGGGTCTGCCCGCTAGCAGCACCAT
GAACTGCGAGCCCAAGCCCGACTTCGGCGGTGGCCACCCCGACCCCAACC
TGGTTTACGCCCACGAGCTCGTCGAGAGCGTTGACAAGAATGGCATCCAC
TTCGGTGCTGCCAGTGATGGTGACGGTGACCGTAACATGATCTACGGCGC
CAACACCTTCGTCTCCCCCGGTGACAGTCTGGCCATCATTGCCCACCACG
CCAAGCTCATCCCATACTTCCAGAAGCAGGGCGTCTACGGCCTGGCGCGC
TCCATGCCCACCTCCGGTGCTGTCGACCGCGTGGCCAAGGCCCAGGGCCT
GCAGAGCTACGAGGTCCCCACGGGCTGGAAGTTCTTCTGCAACTTGTTCG
ACAACCAGAAGATCTCCATCTGTGGTGAGGAGAGTTTCGGTACTGGCAGC
AACCACATCCGTGAGAAGGACGGCCTGTGGGCCATTGTGGCCTGGCTGAA
CGTCATCGCTGGCGTTGCCAAGCAGAAGCCCAGCGAGACCCCCAGCATCG
CTTCCATCCAGAACGAGTTCTGGCAGACCTACGGCCGTACCTTCTTCACC
CGGTACGACTACGAGAACGTCGACAGCGACGGCGCCAACAAGGTGATCGC
CACGCTGTCGGAGAAGGTCGACAACAAGGACACCTTCGTTGGCTCGACCG
TGTCCGGCCGCAAGGTCGTCGACGTCGGCAACTTCGCCTACACCGACTTG
GACGGCAGCGTGACCAAGAACCAGGGTCTGTACGTCAAGTTCGATGACGG
CAGCCGCATCGTCGTCCGTCTGTCTGGCACTGGCAGCAGCGGCGCCACGA
TCCGTCTGTACATCGAGAAGTACGAGAACGACGCCAGCAAGCTCGGTCTC
GCCACGGATGAGTACCTGAAGGACAACGTGGCTCTGGCTCTGGAGCTGCT
CAAGTTCAAGGAGTACATTGGCCGTGAGGAGCCTGATGTCCGCACTTAAC
TCCGGTCTTCGTAAGAAGGTCAAGGTCTTCCAGCAGGCCAACTACTCCGA
ATCCTTCGTTACTAGCATCATCCTCTCCATCCCCGAGGGCGCTGAGGGCG
CTTTCCTCGTCATCGGTGGCGATGGCCGCTACTACAACACCGAGGTCATC
CAGAAGATTGCTAAAATCGGTGCCGCTTATGGTGTCAAGAAGCTGCTGGT
CGGCCAGAATGGCATCCTCTCCACCCCCGCTGCCAGTAACCTCATCCGCA
AGCGCAAGGCCACCGGTGGTATCCTCCTGACGGCCAGTCACAACCCTGGT
GATGTCCGTCCAGACCGTCTCCATTACTCCCTTCACCGACCAGAAGCCGG
GAAC
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0000287magnesium ion binding
GO:0016868intramolecular transferase activity, phosphotransferases
Vocabulary: Biological Process
TermDefinition
GO:0071704organic substance metabolic process
GO:0005975carbohydrate metabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_005995KJC3_005995Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005995-T1KJC3_005995-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005995-T1.cdsKJC3_005995-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005995-T1.utr3p1KJC3_005995-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005995-T1.exon3KJC3_005995-T1.exon3Aspergillus niger KJC3exon
KJC3_005995-T1.exon2KJC3_005995-T1.exon2Aspergillus niger KJC3exon
KJC3_005995-T1.exon1KJC3_005995-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_005995-T1.utr5p1KJC3_005995-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR036900
DBxrefInterPro:IPR016055
DBxrefInterPro:IPR016066
DBxrefInterPro:IPR005843
DBxrefInterPro:IPR005844
DBxrefInterPro:IPR005845
DBxrefInterPro:IPR005846
DBxrefInterPro:IPR005841
DBxrefPFAM:PF00408
DBxrefPFAM:PF02880
DBxrefPFAM:PF02879
DBxrefPFAM:PF02878
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4349430..4351633 -
Powered by Drupal