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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4365266..4367497- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006000-T1 ID=KJC3_006000-T1|Name=KJC3_006000-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2232bp|location=Sequence derived from alignment at ch4:4365266..4367497- (Aspergillus niger KJC3) ATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAATCC
CTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCTTC
CCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCGAC
CACTACTACGAGTGAGTAACCAGCCCGCACACCTCACCCCAGAAGTACAT
TGACTGACAGATTAATTCCATAAAGTGCCATCGTAATAGGAGCCGGCGGC
GCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGC
ATGCATCACGAAACTGGTAGCATACCCTATACCCATTCCCTTCACATATA
TAACCCCCGAACAATCTCACAAAAGAGAGAAGTGACAATGAAATTAAGTT
TGAACATGATAGTTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGG
CATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCTGGCACA
TGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATC
CACTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTA
CGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTC
TTGGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACT
GCTTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGG
GGAGGCGTTGAAGGTATATCACGCCATCATAATATACTGTAGAAATGATG
AACCCTGGTTCAATATAGTACTCTGGCAGAGACTGACTGACTGACGGATG
TGTTTAAACTCCAGCACGATACCAAATTCTTCGTTGAATTCTTCGCCCTT
GATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCT
TGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGA
CGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCT
ACCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGA
TATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGC
TCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCAC
GGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAG
TCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGG
GCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCT
GCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAAT
TTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGG
TTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTT
ACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGT
AGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCG
TGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTC
TTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACAT
GCCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCC
AAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTC
CCGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCT
CGCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGA
TCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGT
CTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCT
GACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTC
GGGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGG
TTGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCG
GGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTA
AGAGTGTGCCGCCGGTGAAGAGGAGCTACTGA back to topCoding sequence (CDS) from alignment at ch4:4365266..4367497- >KJC3_006000-T1 ID=KJC3_006000-T1|Name=KJC3_006000-T1|organism=Aspergillus niger KJC3|type=CDS|length=7884bp|location=Sequence derived from alignment at ch4:4365266..4367497- (Aspergillus niger KJC3) CACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGT CGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGC TGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGC CGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAA TGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGC AGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAAGGT GCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCAT GGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAG CAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGAT AAGGATCATATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCG TTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTG ACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATG GGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCA CACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAG GCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAAC CGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTG TGCACTCCACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATA TCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCA AGCCTATCCACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACT ACGCCACAACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCA CGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAAT GATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTC AGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGC AGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCG AGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTG GACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGG GGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCG GTGAAGAGGAGCTACTGATTCCCCACACGCTCCCACACCGTCGCAGCCCA AGGCGGCATCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCT GGCACATGTACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGAT GCAATCCACTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGA GAACTACGGCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGC GGGCTCTTGGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTAT CGGACTGCTTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCT GTATGGGGAGGCGTTGAAGTGCCATCGTAATAGGAGCCGGCGGCGCCGGC CTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCAT CACGAAACTGATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCC TACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTC TCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCC GCTATTCGACCACTACTACGACACGATACCAAATTCTTCGTTGAATTCTT CGCCCTTGATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCC TCTCTCTTGAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTC CTCGCGACGGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACA TACTTCTACCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTA ACCAGGATATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCC GGGGTGCTCATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAA TGCGCACGGCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACC TGGCTAGTCGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAG GGCCGGGGCTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCA TTTACCTGCCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGG CGTCAATTTTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTT CCTACGGTTCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCA GGTGCTTACTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATG CAGAGGTAGAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGT GTCAGCGTGCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACAT AGTTGTCTTCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAAC CCAACATGCCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGC CTAGGCCAAGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGG CGACCTCCCGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAA CGGACCTCGCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGT AAAGTGATCCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGA TAGAAGTCTAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGA ATCTGCTGACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACG GAGAGTCGGGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGA GGGGTGGTTGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGG GGGTTCGGGTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGG GATTGTAAGAGTGTGCCGCCGGTGAAGAGGAGCTACTGATTCCCCACACG CTCCCACACCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAACA TGACGAAAGACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTCA GACTGGCTAGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCACC GAAGGCTATATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACAG AAGATGGTCGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTAT GGGAAAGGAGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGGG TCATGCCATGTTGCATGCTCTGTATGGGGAGGCGTTGAAGTGCCATCGTA ATAGGAGCCGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTC AGGGTTCCGCACCGCATGCATCACGAAACTGATGTATCGCCTAAGCCGAG CCTTCCATCAAAGAACCCCCCTACCAAATCCCTTCCAAACGCGGCCTTTT CTCAAGCGACACCGCCCATTCTCCACTCTTCCCCGGCACTCATCTCCGGG ACCATCTGTATCTGAAGCCCCGCTATTCGACCACTACTACGACACGATAC CAAATTCTTCGTTGAATTCTTCGCCCTTGATCTTCTCATGGTCGACGGTG CCTGCGTTGGGGTCATCTGCCTCTCTCTTGAAGACGGCACGCTGCATCGC TTTTTTGCGCGAAACACTGTCCTCGCGACGGGCGGTTACGGCCGGGCTTA CTTCTCCTGCACGTCTGCACATACTTCTACCGGAGATGGTAATGCCATGG TTGCCCGCGCGGGTCTTCCTAACCAGGATATGGAGTTCGTGCAGTTCCAC CCTTCTGGGATCCATGGCGCCGGGGTGCTCATCACGGAAGGTGCTCGCGG GGAGGGCGGATATCTCCTCAATGCGCACGGCGAACGCTTCATGGAGCGGT ATGCCCCGACAGCTAAAGACCTGGCTAGTCGGGATGTAGTAGCAAGAGCC ATGAATCTTGAGATCCGCGAGGGCCGGGGCTGTGGCCCGGATAAGGATCA TATCCATCTCCAGCTGTCTCATTTACCTGCCGAGCTCATTCGTTCACGAC TCCCTGGGATTCTTGAGACGGCGTCAATTTTCGCGGGGATTGACATTACT CGGGATCCTATTCCTGTTGTTCCTACGGTTCATTACTGCATGGGCGGGAT ACCGACGAACTATAAAGGCCAGGTGCTTACTAGTAGTAGCCACACTTCCT CGGGGACAAACATCCCAGATGCAGAGGTAGAACCCGTCCCAGGCCTCTAC GCAGCCGGCGAATGTGCCAGTGTCAGCGTGCACGGCGCCAACCGACTCGG CGCAAACTCGCTCCTGGACATAGTTGTCTTCGGCCGGGCGTGTGCACTCC ACATCGCCGAGACCAACGAACCCAACATGCCGCTTCACAATATCCCACAT GATGATACTCCTCCGGCAAGCCTAGGCCAAGACTCTCTATCAAGCCTATC CACGACCCTCCACGCAACAGGCGACCTCCCGTCTTCATCACTACGCCACA ACCTCCAACGAGCCATGCAAACGGACCTCGCTGTGTTCCGCACGCACGAA TCCCTTACCAGAGGACTAAGTAAAGTGATCCAAGTGCAGAATGATTTCTC CACGCGACTCAGAACAAGCGATAGAAGTCTAATCTGGAATTCAGACCTAG TAGAGACACTGGAGTTGAGGAATCTGCTGACGTGCGCGGCGCAGACGGCT ATGGCGGCGTTGTGTAGGACGGAGAGTCGGGGGAGTCATGCGAGGGAGGA TTTCCCGGAGAGGAACGATGAGGGGTGGTTGAAGCATAGTTGGACGTGGC AGAAGGACGAAAAAGAGGAGGGGGTTCGGGTGGGGTATCGGGGGGTGATT ATGAAGACGTTGGATGAGGGGGATTGTAAGAGTGTGCCGCCGGTGAAGAG GAGCTACTGATTCCCCACACGCTCCCACACCGTCGCAGCCCAAGGCGGCA TCAACGCCGCGCTAGGTAACATGACGAAAGACGATTACCGCTGGCACATG TACGACACAGTCAAGGGCTCAGACTGGCTAGGAGACCAAGATGCAATCCA CTATATGACAAGAGAAGCACCGAAGGCTATATACGAGCTGGAGAACTACG GCATGGCGTTTTCCAGAACAGAAGATGGTCGCATATACCAGCGGGCTCTT GGGGGACAGAGTCTGGATTATGGGAAAGGAGGGCAGGCGTATCGGACTGC TTGTGCGGCGGATCGGACGGGTCATGCCATGTTGCATGCTCTGTATGGGG AGGCGTTGAAGTGCCATCGTAATAGGAGCCGGCGGCGCCGGCCTCCGCGC CGCAGTCGGTCTGACCGAGTCAGGGTTCCGCACCGCATGCATCACGAAAC TGATGTATCGCCTAAGCCGAGCCTTCCATCAAAGAACCCCCCTACCAAAT CCCTTCCAAACGCGGCCTTTTCTCAAGCGACACCGCCCATTCTCCACTCT TCCCCGGCACTCATCTCCGGGACCATCTGTATCTGAAGCCCCGCTATTCG ACCACTACTACGACACGATACCAAATTCTTCGTTGAATTCTTCGCCCTTG ATCTTCTCATGGTCGACGGTGCCTGCGTTGGGGTCATCTGCCTCTCTCTT GAAGACGGCACGCTGCATCGCTTTTTTGCGCGAAACACTGTCCTCGCGAC GGGCGGTTACGGCCGGGCTTACTTCTCCTGCACGTCTGCACATACTTCTA CCGGAGATGGTAATGCCATGGTTGCCCGCGCGGGTCTTCCTAACCAGGAT ATGGAGTTCGTGCAGTTCCACCCTTCTGGGATCCATGGCGCCGGGGTGCT CATCACGGAAGGTGCTCGCGGGGAGGGCGGATATCTCCTCAATGCGCACG GCGAACGCTTCATGGAGCGGTATGCCCCGACAGCTAAAGACCTGGCTAGT CGGGATGTAGTAGCAAGAGCCATGAATCTTGAGATCCGCGAGGGCCGGGG CTGTGGCCCGGATAAGGATCATATCCATCTCCAGCTGTCTCATTTACCTG CCGAGCTCATTCGTTCACGACTCCCTGGGATTCTTGAGACGGCGTCAATT TTCGCGGGGATTGACATTACTCGGGATCCTATTCCTGTTGTTCCTACGGT TCATTACTGCATGGGCGGGATACCGACGAACTATAAAGGCCAGGTGCTTA CTAGTAGTAGCCACACTTCCTCGGGGACAAACATCCCAGATGCAGAGGTA GAACCCGTCCCAGGCCTCTACGCAGCCGGCGAATGTGCCAGTGTCAGCGT GCACGGCGCCAACCGACTCGGCGCAAACTCGCTCCTGGACATAGTTGTCT TCGGCCGGGCGTGTGCACTCCACATCGCCGAGACCAACGAACCCAACATG CCGCTTCACAATATCCCACATGATGATACTCCTCCGGCAAGCCTAGGCCA AGACTCTCTATCAAGCCTATCCACGACCCTCCACGCAACAGGCGACCTCC CGTCTTCATCACTACGCCACAACCTCCAACGAGCCATGCAAACGGACCTC GCTGTGTTCCGCACGCACGAATCCCTTACCAGAGGACTAAGTAAAGTGAT CCAAGTGCAGAATGATTTCTCCACGCGACTCAGAACAAGCGATAGAAGTC TAATCTGGAATTCAGACCTAGTAGAGACACTGGAGTTGAGGAATCTGCTG ACGTGCGCGGCGCAGACGGCTATGGCGGCGTTGTGTAGGACGGAGAGTCG GGGGAGTCATGCGAGGGAGGATTTCCCGGAGAGGAACGATGAGGGGTGGT TGAAGCATAGTTGGACGTGGCAGAAGGACGAAAAAGAGGAGGGGGTTCGG GTGGGGTATCGGGGGGTGATTATGAAGACGTTGGATGAGGGGGATTGTAA GAGTGTGCCGCCGGTGAAGAGGAGCTACTGATTCCCCACACGCTCCCACA CCGTCGCAGCCCAAGGCGGCATCAACGCCGCGCTAGGTAACATGACGAAA GACGATTACCGCTGGCACATGTACGACACAGTCAAGGGCTCAGACTGGCT AGGAGACCAAGATGCAATCCACTATATGACAAGAGAAGCACCGAAGGCTA TATACGAGCTGGAGAACTACGGCATGGCGTTTTCCAGAACAGAAGATGGT CGCATATACCAGCGGGCTCTTGGGGGACAGAGTCTGGATTATGGGAAAGG AGGGCAGGCGTATCGGACTGCTTGTGCGGCGGATCGGACGGGTCATGCCA TGTTGCATGCTCTGTATGGGGAGGCGTTGAAGTGCCATCGTAATAGGAGC CGGCGGCGCCGGCCTCCGCGCCGCAGTCGGTCTGACCGAGTCAGGGTTCC GCACCGCATGCATCACGAAACTGATGTATCGCCTAAGCCGAGCCTTCCAT CAAAGAACCCCCCTACCAAATCCCTTCCAAACGCGGCCTTTTCTCAAGCG ACACCGCCCATTCTCCACTCTTCCCCGGCACTCATCTCCGGGACCATCTG TATCTGAAGCCCCGCTATTCGACCACTACTACGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
Term | Definition |
GO:0022900 | electron transport chain |
GO:0055114 | oxidation-reduction process |
GO:0006099 | tricarboxylic acid cycle |
Vocabulary: Molecular Function
Term | Definition |
GO:0016491 | oxidoreductase activity |
GO:0050660 | flavin adenine dinucleotide binding |
GO:0016627 | oxidoreductase activity, acting on the CH-CH group of donors |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
Property Name | Value |
DBxref | InterPro:IPR037099 |
DBxref | InterPro:IPR003952 |
DBxref | InterPro:IPR015939 |
DBxref | InterPro:IPR003953 |
DBxref | InterPro:IPR027477 |
DBxref | InterPro:IPR014006 |
DBxref | InterPro:IPR036188 |
DBxref | InterPro:IPR011281 |
DBxref | PFAM:PF02910 |
DBxref | PFAM:PF00890 |
Product | succinate dehydrogenase flavoprotein subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:4365266..4367497 - |
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