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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4374995..4376988+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006003-T1 ID=KJC3_006003-T1|Name=KJC3_006003-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1994bp|location=Sequence derived from alignment at ch4:4374995..4376988+ (Aspergillus niger KJC3)
CTTGAATTCGGGTTTGGTGGGTGACCCGATCGCCCTCCGGCCGCTTTCCT
CTTCCACTCTCCCCCCCCATGACATATTCATCTGTCTCCCTCCTGTTCCT
CTCCCCTCTTCCTTCTCTCTTCCCCGCTTCACTCTTTTTCACCCGTCCTC
CCAGGGCTTATTCTTAGTCAGTCCTGCGGTCTTGTATCAGATCAGTAGTC
GATATTGTTTTCACATCTGCAAAATGAGTTCCAGCAAGGATTCAGCGTCC
GGCGTTCCCGCCCACAGCAAAGGTTCCTGGACAAGTTTCCTTAAGGTATG
AAGTTTGAACGACCGGATTTCTTCTAGGCAATTGGTCCCACACTCTAGAC
TGTCTAACCCGGTATTGCTTACGGATCTTGGCTAACCGATATGGTACCTT
CCTCCAGTCTATCGCCTCCTTCAACGGAGATCTTTCCTCCTTGACCGCCC
CGCCCTTTATCCTCTCGTCCACCTCCTTGACCGAATATTCTGCCTACTGG
GCCGAACACCCAGCCCTGTTTGTGGCTGCCGCAAAAGAAGCAGACCCTGA
GAAGAGAGCCCTGGCTGTCTTGAAGTGGTTCCTCAGCACTCTTCACCAGC
AGTACTGCAGTCGCAGTGAGAAGCTCGGTAGCGAAAAGAAGCCCTTGAAC
CCTTTCCTGGGAGAGTTGTTCCTTGGCAAGTGGGATTCCGATGCGGACGT
GGGCGAGACCACCTTGATCAGTGAGCAAGTCAGGTAGGTGGTTATGCTGT
CCCCACTCCGGATCGTATTGACCGCTTTAGCCACCATCCCCCTGCTACTG
CTTATGCTATCAGAAACGAGAAGCATGGCGTTGAGGTATGTAGCTATTCA
AGATTTCATGTACGACGAGGCTCTGATTGTGAACTTGAAATGTAGCTTCA
AGGATACAACGCCCAGAAGGCATCCTTCTCCAGCACCATTCAGATCAAAC
AGATCGGACATGCTCTGTTGACGCTCACTCCCCCAGGTGCGGATAAGAAC
GATCCTTCTCAGCAGGAACGGTACCTGATCACCCTCCCGCACCTGCACAT
CGAATCCCTTATCTACGGAACGCCATTCGTCGAACTGGAGAAGTCCACTC
GCATTGCCAGCAGCACTGGCTACGTGGCGAAGATTGACTACTCTGGCAAG
GGCTGGTTGAGCGGCAAGAAGAACACCTTCAGCGCCATCCTGTTCAAGGA
GAACGAGGGCGAGAAGAAGCCTCTGTACACTGTTGACGGACAATGGTCGG
ATTCGTTCGTCATCAAAGACTCTCGCAAGCATGAGGTGGACAGATTTTCT
GTCAAGCACACGAAGACCACCCCATTGACTCTGGCGCCCGTCGACCAGCA
AGACCTCTATGAGAGCCGGCGGGCATGGGCGGACGTTGCGGCAGGCATTG
AGCGGGGCGATATGGATGCCGTGTCCGTGGCCAAGTCCAAGATCGAGAAC
GCTCAGCGCGAGCTTCGCAGGGTCGAGAAGTCAGAAGGCCGCGAGTGGGA
CCGACGCTTCTTCAAGCGCGTCAACGACACCGACGATGAGGAATTCTGGC
GACTCGCAAGAATGATCGGTGTCACGTCTTTGGAGAGCGACAAGACCGGC
GGTGTCTGGAGGTTTGACCCTACCAGCGCTGCGGACGCCAAGCCCCCTTA
CCATAAGACTGGCGGCGAAGGTCTGGGAATTACTGCATGAAATGATTCGA
CGGTCGGCAGATATACACGTTGCGTTTAATCAACCTCTTTTATAGTCCGG
GTGGACAAGTGATCTGGCAAACATGGCATGAACAAGTGCCCTTATAGAGT
ACGTTTGCTTTCATAACAGGATCTATTATTTGGCTTTGGTGGAGATGTTT
CGGCACCTGTATATAGAACAGTAACGACAGCTGGATAATCAGCGAATCCC
AGCGACATTGGAAAGATGCAGTTCGCGTGAAGGAGTAATAAGAATGTGTT
TTATACTCGCCTTTGGTAATATTAGTAAAAGCCCAAGTCTTAGC back to topCoding sequence (CDS) from alignment at ch4:4374995..4376988+ >KJC3_006003-T1 ID=KJC3_006003-T1|Name=KJC3_006003-T1|organism=Aspergillus niger KJC3|type=CDS|length=4992bp|location=Sequence derived from alignment at ch4:4374995..4376988+ (Aspergillus niger KJC3)
ATGAGTTCCAGCAAGGATTCAGCGTCCGGCGTTCCCGCCCACAGCAAAGG
TTCCTGGACAAGTTTCCTTAAGTCTATCGCCTCCTTCAACGGAGATCTTT
CCTCCTTGACCGCCCCGCCCTTTATCCTCTCGTCCACCTCCTTGACCGAA
TATTCTGCCTACTGGGCCGAACACCCAGCCCTGTTTGTGGCTGCCGCAAA
AGAAGCAGACCCTGAGAAGAGAGCCCTGGCTGTCTTGAAGTGGTTCCTCA
GCACTCTTCACCAGCAGTACTGCAGTCGCAGTGAGAAGCTCGGTAGCGAA
AAGAAGCCCTTGAACCCTTTCCTGGGAGAGTTGTTCCTTGGCAAGTGGGA
TTCCGATGCGGACGTGGGCGAGACCACCTTGATCAGTGAGCAAGTCAGCC
ACCATCCCCCTGCTACTGCTTATGCTATCAGAAACGAGAAGCATGGCGTT
GAGCTTCAAGGATACAACGCCCAGAAGGCATCCTTCTCCAGCACCATTCA
GATCAAACAGATCGGACATGCTCTGTTGACGCTCACTCCCCCAGGTGCGG
ATAAGAACGATCCTTCTCAGCAGGAACGGTACCTGATCACCCTCCCGCAC
CTGCACATCGAATCCCTTATCTACGGAACGCCATTCGTCGAACTGGAGAA
GTCCACTCGCATTGCCAGCAGCACTGGCTACGTGGCGAAGATTGACTACT
CTGGCAAGGGCTGGTTGAGCGGCAAGAAGAACACCTTCAGCGCCATCCTG
TTCAAGGAGAACGAGGGCGAGAAGAAGCCTCTGTACACTGTTGACGGACA
ATGGTCGGATTCGTTCGTCATCAAAGACTCTCGCAAGCATGAGGTGGACA
GATTTTCTGTCAAGCACACGAAGACCACCCCATTGACTCTGGCGCCCGTC
GACCAGCAAGACCTCTATGAGAGCCGGCGGGCATGGGCGGACGTTGCGGC
AGGCATTGAGCGGGGCGATATGGATGCCGTGTCCGTGGCCAAGTCCAAGA
TCGAGAACGCTCAGCGCGAGCTTCGCAGGGTCGAGAAGTCAGAAGGCCGC
GAGTGGGACCGACGCTTCTTCAAGCGCGTCAACGACACCGACGATGAGGA
ATTCTGGCGACTCGCAAGAATGATCGGTGTCACGTCTTTGGAGAGCGACA
AGACCGGCGGTGTCTGGAGGTTTGACCCTACCAGCGCTGCGGACGCCAAG
CCCCCTTACCATAAGACTGGCGGCGAAGGTCTGGGAATTACTGCATGAAT
GAGTTCCAGCAAGGATTCAGCGTCCGGCGTTCCCGCCCACAGCAAAGGTT
CCTGGACAAGTTTCCTTAAGTCTATCGCCTCCTTCAACGGAGATCTTTCC
TCCTTGACCGCCCCGCCCTTTATCCTCTCGTCCACCTCCTTGACCGAATA
TTCTGCCTACTGGGCCGAACACCCAGCCCTGTTTGTGGCTGCCGCAAAAG
AAGCAGACCCTGAGAAGAGAGCCCTGGCTGTCTTGAAGTGGTTCCTCAGC
ACTCTTCACCAGCAGTACTGCAGTCGCAGTGAGAAGCTCGGTAGCGAAAA
GAAGCCCTTGAACCCTTTCCTGGGAGAGTTGTTCCTTGGCAAGTGGGATT
CCGATGCGGACGTGGGCGAGACCACCTTGATCAGTGAGCAAGTCAGCCAC
CATCCCCCTGCTACTGCTTATGCTATCAGAAACGAGAAGCATGGCGTTGA
GCTTCAAGGATACAACGCCCAGAAGGCATCCTTCTCCAGCACCATTCAGA
TCAAACAGATCGGACATGCTCTGTTGACGCTCACTCCCCCAGGTGCGGAT
AAGAACGATCCTTCTCAGCAGGAACGGTACCTGATCACCCTCCCGCACCT
GCACATCGAATCCCTTATCTACGGAACGCCATTCGTCGAACTGGAGAAGT
CCACTCGCATTGCCAGCAGCACTGGCTACGTGGCGAAGATTGACTACTCT
GGCAAGGGCTGGTTGAGCGGCAAGAAGAACACCTTCAGCGCCATCCTGTT
CAAGGAGAACGAGGGCGAGAAGAAGCCTCTGTACACTGTTGACGGACAAT
GGTCGGATTCGTTCGTCATCAAAGACTCTCGCAAGCATGAGGTGGACAGA
TTTTCTGTCAAGCACACGAAGACCACCCCATTGACTCTGGCGCCCGTCGA
CCAGCAAGACCTCTATGAGAGCCGGCGGGCATGGGCGGACGTTGCGGCAG
GCATTGAGCGGGGCGATATGGATGCCGTGTCCGTGGCCAAGTCCAAGATC
GAGAACGCTCAGCGCGAGCTTCGCAGGGTCGAGAAGTCAGAAGGCCGCGA
GTGGGACCGACGCTTCTTCAAGCGCGTCAACGACACCGACGATGAGGAAT
TCTGGCGACTCGCAAGAATGATCGGTGTCACGTCTTTGGAGAGCGACAAG
ACCGGCGGTGTCTGGAGGTTTGACCCTACCAGCGCTGCGGACGCCAAGCC
CCCTTACCATAAGACTGGCGGCGAAGGTCTGGGAATTACTGCATGAATGA
GTTCCAGCAAGGATTCAGCGTCCGGCGTTCCCGCCCACAGCAAAGGTTCC
TGGACAAGTTTCCTTAAGTCTATCGCCTCCTTCAACGGAGATCTTTCCTC
CTTGACCGCCCCGCCCTTTATCCTCTCGTCCACCTCCTTGACCGAATATT
CTGCCTACTGGGCCGAACACCCAGCCCTGTTTGTGGCTGCCGCAAAAGAA
GCAGACCCTGAGAAGAGAGCCCTGGCTGTCTTGAAGTGGTTCCTCAGCAC
TCTTCACCAGCAGTACTGCAGTCGCAGTGAGAAGCTCGGTAGCGAAAAGA
AGCCCTTGAACCCTTTCCTGGGAGAGTTGTTCCTTGGCAAGTGGGATTCC
GATGCGGACGTGGGCGAGACCACCTTGATCAGTGAGCAAGTCAGCCACCA
TCCCCCTGCTACTGCTTATGCTATCAGAAACGAGAAGCATGGCGTTGAGC
TTCAAGGATACAACGCCCAGAAGGCATCCTTCTCCAGCACCATTCAGATC
AAACAGATCGGACATGCTCTGTTGACGCTCACTCCCCCAGGTGCGGATAA
GAACGATCCTTCTCAGCAGGAACGGTACCTGATCACCCTCCCGCACCTGC
ACATCGAATCCCTTATCTACGGAACGCCATTCGTCGAACTGGAGAAGTCC
ACTCGCATTGCCAGCAGCACTGGCTACGTGGCGAAGATTGACTACTCTGG
CAAGGGCTGGTTGAGCGGCAAGAAGAACACCTTCAGCGCCATCCTGTTCA
AGGAGAACGAGGGCGAGAAGAAGCCTCTGTACACTGTTGACGGACAATGG
TCGGATTCGTTCGTCATCAAAGACTCTCGCAAGCATGAGGTGGACAGATT
TTCTGTCAAGCACACGAAGACCACCCCATTGACTCTGGCGCCCGTCGACC
AGCAAGACCTCTATGAGAGCCGGCGGGCATGGGCGGACGTTGCGGCAGGC
ATTGAGCGGGGCGATATGGATGCCGTGTCCGTGGCCAAGTCCAAGATCGA
GAACGCTCAGCGCGAGCTTCGCAGGGTCGAGAAGTCAGAAGGCCGCGAGT
GGGACCGACGCTTCTTCAAGCGCGTCAACGACACCGACGATGAGGAATTC
TGGCGACTCGCAAGAATGATCGGTGTCACGTCTTTGGAGAGCGACAAGAC
CGGCGGTGTCTGGAGGTTTGACCCTACCAGCGCTGCGGACGCCAAGCCCC
CTTACCATAAGACTGGCGGCGAAGGTCTGGGAATTACTGCATGAATGAGT
TCCAGCAAGGATTCAGCGTCCGGCGTTCCCGCCCACAGCAAAGGTTCCTG
GACAAGTTTCCTTAAGTCTATCGCCTCCTTCAACGGAGATCTTTCCTCCT
TGACCGCCCCGCCCTTTATCCTCTCGTCCACCTCCTTGACCGAATATTCT
GCCTACTGGGCCGAACACCCAGCCCTGTTTGTGGCTGCCGCAAAAGAAGC
AGACCCTGAGAAGAGAGCCCTGGCTGTCTTGAAGTGGTTCCTCAGCACTC
TTCACCAGCAGTACTGCAGTCGCAGTGAGAAGCTCGGTAGCGAAAAGAAG
CCCTTGAACCCTTTCCTGGGAGAGTTGTTCCTTGGCAAGTGGGATTCCGA
TGCGGACGTGGGCGAGACCACCTTGATCAGTGAGCAAGTCAGCCACCATC
CCCCTGCTACTGCTTATGCTATCAGAAACGAGAAGCATGGCGTTGAGCTT
CAAGGATACAACGCCCAGAAGGCATCCTTCTCCAGCACCATTCAGATCAA
ACAGATCGGACATGCTCTGTTGACGCTCACTCCCCCAGGTGCGGATAAGA
ACGATCCTTCTCAGCAGGAACGGTACCTGATCACCCTCCCGCACCTGCAC
ATCGAATCCCTTATCTACGGAACGCCATTCGTCGAACTGGAGAAGTCCAC
TCGCATTGCCAGCAGCACTGGCTACGTGGCGAAGATTGACTACTCTGGCA
AGGGCTGGTTGAGCGGCAAGAAGAACACCTTCAGCGCCATCCTGTTCAAG
GAGAACGAGGGCGAGAAGAAGCCTCTGTACACTGTTGACGGACAATGGTC
GGATTCGTTCGTCATCAAAGACTCTCGCAAGCATGAGGTGGACAGATTTT
CTGTCAAGCACACGAAGACCACCCCATTGACTCTGGCGCCCGTCGACCAG
CAAGACCTCTATGAGAGCCGGCGGGCATGGGCGGACGTTGCGGCAGGCAT
TGAGCGGGGCGATATGGATGCCGTGTCCGTGGCCAAGTCCAAGATCGAGA
ACGCTCAGCGCGAGCTTCGCAGGGTCGAGAAGTCAGAAGGCCGCGAGTGG
GACCGACGCTTCTTCAAGCGCGTCAACGACACCGACGATGAGGAATTCTG
GCGACTCGCAAGAATGATCGGTGTCACGTCTTTGGAGAGCGACAAGACCG
GCGGTGTCTGGAGGTTTGACCCTACCAGCGCTGCGGACGCCAAGCCCCCT
TACCATAAGACTGGCGGCGAAGGTCTGGGAATTACTGCATGA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006003-T1.utr5p1 | KJC3_006003-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006003-T1.utr3p1 | KJC3_006003-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR037239 |
| DBxref | InterPro:IPR018494 |
| DBxref | InterPro:IPR000648 |
| DBxref | PFAM:PF01237 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4374995..4376988 + |
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