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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4412286..4413533+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006019-T1 ID=KJC3_006019-T1|Name=KJC3_006019-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1248bp|location=Sequence derived from alignment at ch4:4412286..4413533+ (Aspergillus niger KJC3)
CTCACAAGGTATAGCTACCCACCACGGACATCCTACAATTTCCAACAACA
CATCATTCAGTCACAGAAGCGTATCCACCATGTCCAATCCATCTCTATAC
GGACAACCACGAACGAAAAAATCAACACAGTCCGAAGCCCCCTCCGCCTC
CACCCTCGCTTTCACCAGCACCCTCTCCTCCTTAATCGCCAAAGACAGCA
CCGACTCCTCATCAACTCGCGGCACCGGCCGCCCACGACCCTCCAAAGCT
CCCAAATCCGACATCTTCAGTCGCCCCAACAAAGGCGCACAGAAACGTGC
CGCTGCTGACCTCCGCGACGATGACAACGCCGCTCTGCAGCAGGCGCACC
AGCGCACGCAGGACATCGGAGCCGTGGACGCCGCCACGCTGCACCGGTCC
AAGCGGCGGATGGAGGAGAAGGTTCGGATGTACGAAGACATGTCGCGGGG
ACTATATCTAGCCGGTGGAGAGAGTGATGAGGGGGAGGATGACGTTGGAC
CGGGGGATGCGTATCTGGCTCGGTTGCGGCGCAAGGAGAGGGAAGGGTTA
GTGGATTTTGATCAGAAGTGGAGAAAGGATGACCGTGAAGATGATGAGGA
GGATGAAGATGAAGGAGAAGACAATGATGATAATGCGTCGATTGTTTCCT
ACGAAGATGAACTCGGCCGGTCACGGCGCGGAACTCGAGCAGAGGCGGCG
CGTGCGGCGGCGCTTAAAGCGGAGGAAGGGGAAGGGCGAGGAGGAAATAC
AGAGAGGTGGCGTCCGGCTCGCCCAGATAATTTGATCTATGGGGCGACGG
TGCAGGCGGAGGCATTTAATCCAGATGCGGCGGTTGCGTCACGGATGTCG
GATCTGGCTGCGCGGAGGGATCGGTCGGCTACGCCGCCGGAGGAGATGCA
TTATGATGCTGATGCGGAGGTGCGGAATCGGGGTACGGGGTTCTATGCTT
TCTCGAAGGATGAGAATGTACGGAGACAGCAGATGGAAGAGTTGCTGAAT
GCGCGGGAGGAAACGCAGCGGGAGCGAGACGCCAGGCGGGAAAGACGTGC
GGAGCGCGAGCGGCTGAGGGATGAACGGAGGAAGAAGGTCGATGAACTGA
GGGCTAAACGACGCGCGGAGATGTTCCTCGCCGGTCTGGGAGACGCGGGT
CTACTGGCAGGGGGCAGTGGATAGAGGTTGACGCTTTATATTTGCATTTT
AGCTGCTTGATTATGTTCTATGATACCCCATTGATGATATATTATGCT back to topCoding sequence (CDS) from alignment at ch4:4412286..4413533+ >KJC3_006019-T1 ID=KJC3_006019-T1|Name=KJC3_006019-T1|organism=Aspergillus niger KJC3|type=CDS|length=1095bp|location=Sequence derived from alignment at ch4:4412286..4413533+ (Aspergillus niger KJC3)
ATGTCCAATCCATCTCTATACGGACAACCACGAACGAAAAAATCAACACA
GTCCGAAGCCCCCTCCGCCTCCACCCTCGCTTTCACCAGCACCCTCTCCT
CCTTAATCGCCAAAGACAGCACCGACTCCTCATCAACTCGCGGCACCGGC
CGCCCACGACCCTCCAAAGCTCCCAAATCCGACATCTTCAGTCGCCCCAA
CAAAGGCGCACAGAAACGTGCCGCTGCTGACCTCCGCGACGATGACAACG
CCGCTCTGCAGCAGGCGCACCAGCGCACGCAGGACATCGGAGCCGTGGAC
GCCGCCACGCTGCACCGGTCCAAGCGGCGGATGGAGGAGAAGGTTCGGAT
GTACGAAGACATGTCGCGGGGACTATATCTAGCCGGTGGAGAGAGTGATG
AGGGGGAGGATGACGTTGGACCGGGGGATGCGTATCTGGCTCGGTTGCGG
CGCAAGGAGAGGGAAGGGTTAGTGGATTTTGATCAGAAGTGGAGAAAGGA
TGACCGTGAAGATGATGAGGAGGATGAAGATGAAGGAGAAGACAATGATG
ATAATGCGTCGATTGTTTCCTACGAAGATGAACTCGGCCGGTCACGGCGC
GGAACTCGAGCAGAGGCGGCGCGTGCGGCGGCGCTTAAAGCGGAGGAAGG
GGAAGGGCGAGGAGGAAATACAGAGAGGTGGCGTCCGGCTCGCCCAGATA
ATTTGATCTATGGGGCGACGGTGCAGGCGGAGGCATTTAATCCAGATGCG
GCGGTTGCGTCACGGATGTCGGATCTGGCTGCGCGGAGGGATCGGTCGGC
TACGCCGCCGGAGGAGATGCATTATGATGCTGATGCGGAGGTGCGGAATC
GGGGTACGGGGTTCTATGCTTTCTCGAAGGATGAGAATGTACGGAGACAG
CAGATGGAAGAGTTGCTGAATGCGCGGGAGGAAACGCAGCGGGAGCGAGA
CGCCAGGCGGGAAAGACGTGCGGAGCGCGAGCGGCTGAGGGATGAACGGA
GGAAGAAGGTCGATGAACTGAGGGCTAAACGACGCGCGGAGATGTTCCTC
GCCGGTCTGGGAGACGCGGGTCTACTGGCAGGGGGCAGTGGATAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006019-T1.utr5p1 | KJC3_006019-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006019-T1.utr3p1 | KJC3_006019-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR025066 |
| DBxref | PFAM:PF13300 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4412286..4413533 + |
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