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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4455365..4457313- Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006031-T1 ID=KJC3_006031-T1|Name=KJC3_006031-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1949bp|location=Sequence derived from alignment at ch4:4455365..4457313- (Aspergillus niger KJC3)
ATGCCATTCTACTCTAGCTCTACTCGTTCCAAAAAGTCTAAAAAAGATGG
GACGAGCAGAGCGTCCACGGCTTCGGTCATTTCTTCGAATTCGCATTCCA
CCAAAGGCCCCAAACTGTCAGTGGACAAACCCAAGGTAGACAGCCAAACC
CAATCTACTATATCAAAGAGCAACAGCAACGGGTCCACAACGCGGCCACA
AGCAACTCAGAACAAGCATGATTCCGATCGCAAAGCACCCAACGTGTTCG
AGTACCTCGAAGACAATTCGACTACAACGGATGATTCGTCTGATGACGAG
TACGAACATCATCAGCTACATAGCGTACCCAACAATAATGCCAAGGGGGC
ATACAAGAACGCTGTCCGTCAGATGTATCGCCCCGCCGCTCAAGGGACTG
ATACCCGCAGCCGTACTTCGTCCATAATGTCCAAGTCCTCAGCGAACACT
CAGAAGACTCCTAGCTCAATTGACATTTCCCCAAGCACCGTCACCTCAAA
CACAGTGAAGAACCACATCCCCGCACATAAACCCTCACTGGATGGGGCAT
ACAGTGCGGTAGGGGCGTTCCCCGACGGCTCGAACTACTATGAGAAACGA
AGCGTGGATTTGAACGCAAGACCGGAGACCTATTACCCTCAGAATTCTGT
CTCTCTTCATCGGTCGCCACTACCCCCATCACCGCCGCGAAGCCCTGAAG
AAGACCTTCACCGGCCCACACGGCGGAACAGACGCAACACCAAATCCTCC
TCAGAGATCTCCGGATATAGCCTTCTCGCTACCCGGCTGAGCTCGGCCAC
AGAGAGCCAAGAGCCCCGTCTCCCTCCTCTGTATCGCCGGTTTGAGAATC
TCAACCATCGCGTCCTGCTTCATCTTCAGGACGAGATCGCACAAATGGAG
GAAGACCTGCGTCTAGTGGACGAGTATGAGGAATTGCAACGGGCCGCGAC
GGCCGAACAAGAGGGGACAAAAATGCTCCCTGCCTCCCGGCGTATGGATG
CCCAAGCACAGGTGTACTCCTCCATCCACTACCGACGTGAGGAGCTCCTG
GGAGCGCTAGCCCGAAAGACCGAACAATATAGTAAGTGCCAGTTGCCCGC
CAATCATCGATACAAATGCTAACAACCCTTTTTCTAGATAATGCCCTCAG
CGCATATAGTAGGGTCCTTCAAACGCTCCCCCGTGCCTCGACGCAGGATA
TCGACACCTACCGGAACTGGATGAAGCAAACCAACCCCGTCATCACCGCT
GAGACACGTTTCCTCGATTACTCCAAAGACCTTATCTCTCTAACTCCACG
CATGGCTTCTACATCGACCGCGAAGCCTATCTTCACCACCATCATCATTG
CCTCTACGGCCATTCTCCTACCATTGCTCGCATTCAGCATGATCTCTGAG
TTCTCCGGTCGTCTTGTTGTAGTCGCACTCGTAGGAGTCGCTGCGTCCAT
CATTGCCTCCACCAACTCCACCAGCGCAGACCAGCTCGTTGACTCTCGAG
ATGGCTGGAGATGTGCCACTATGTATGTCTTCCCGGTCTCCTCTACTACA
GTACAATAACTAACCACACGGCTCAGATACTTCGGCTTCATGACCGTCGC
CGCAATGTTCATCCCTTGAATGACCACTACTTACGATACCATTAATCAAC
TAATGACTCGACGAATTTTATTTGGGTAGCGTATATCGTTGTTCTAGCGT
TTCTTCCTCGGATGTTATTGAGCCTTGAACAGATTGAGAACTGGTTCCTT
TAGAAGATAGGCAGGCGTTAACGACACTGGACTGGAAAAACAGACGACAG
CCTGAGTGGGGGGTTATAGGGTGCGCCAAATAGCAGAACCTTTTTTCTAC
CTCGTCGTACTATCTCTTAATTCCTATCTTTCATTGATTCTTGTCATGTA
TTTGAGCGTGTATAATGATGAGATTGTTGTATACTACACTCGTTTCACA back to topCoding sequence (CDS) from alignment at ch4:4455365..4457313- >KJC3_006031-T1 ID=KJC3_006031-T1|Name=KJC3_006031-T1|organism=Aspergillus niger KJC3|type=CDS|length=4527bp|location=Sequence derived from alignment at ch4:4455365..4457313- (Aspergillus niger KJC3)
ATACTTCGGCTTCATGACCGTCGCCGCAATGTTCATCCCTTGAATAATGC
CCTCAGCGCATATAGTAGGGTCCTTCAAACGCTCCCCCGTGCCTCGACGC
AGGATATCGACACCTACCGGAACTGGATGAAGCAAACCAACCCCGTCATC
ACCGCTGAGACACGTTTCCTCGATTACTCCAAAGACCTTATCTCTCTAAC
TCCACGCATGGCTTCTACATCGACCGCGAAGCCTATCTTCACCACCATCA
TCATTGCCTCTACGGCCATTCTCCTACCATTGCTCGCATTCAGCATGATC
TCTGAGTTCTCCGGTCGTCTTGTTGTAGTCGCACTCGTAGGAGTCGCTGC
GTCCATCATTGCCTCCACCAACTCCACCAGCGCAGACCAGCTCGTTGACT
CTCGAGATGGCTGGAGATGTGCCACTATATGCCATTCTACTCTAGCTCTA
CTCGTTCCAAAAAGTCTAAAAAAGATGGGACGAGCAGAGCGTCCACGGCT
TCGGTCATTTCTTCGAATTCGCATTCCACCAAAGGCCCCAAACTGTCAGT
GGACAAACCCAAGGTAGACAGCCAAACCCAATCTACTATATCAAAGAGCA
ACAGCAACGGGTCCACAACGCGGCCACAAGCAACTCAGAACAAGCATGAT
TCCGATCGCAAAGCACCCAACGTGTTCGAGTACCTCGAAGACAATTCGAC
TACAACGGATGATTCGTCTGATGACGAGTACGAACATCATCAGCTACATA
GCGTACCCAACAATAATGCCAAGGGGGCATACAAGAACGCTGTCCGTCAG
ATGTATCGCCCCGCCGCTCAAGGGACTGATACCCGCAGCCGTACTTCGTC
CATAATGTCCAAGTCCTCAGCGAACACTCAGAAGACTCCTAGCTCAATTG
ACATTTCCCCAAGCACCGTCACCTCAAACACAGTGAAGAACCACATCCCC
GCACATAAACCCTCACTGGATGGGGCATACAGTGCGGTAGGGGCGTTCCC
CGACGGCTCGAACTACTATGAGAAACGAAGCGTGGATTTGAACGCAAGAC
CGGAGACCTATTACCCTCAGAATTCTGTCTCTCTTCATCGGTCGCCACTA
CCCCCATCACCGCCGCGAAGCCCTGAAGAAGACCTTCACCGGCCCACACG
GCGGAACAGACGCAACACCAAATCCTCCTCAGAGATCTCCGGATATAGCC
TTCTCGCTACCCGGCTGAGCTCGGCCACAGAGAGCCAAGAGCCCCGTCTC
CCTCCTCTGTATCGCCGGTTTGAGAATCTCAACCATCGCGTCCTGCTTCA
TCTTCAGGACGAGATCGCACAAATGGAGGAAGACCTGCGTCTAGTGGACG
AGTATGAGGAATTGCAACGGGCCGCGACGGCCGAACAAGAGGGGACAAAA
ATGCTCCCTGCCTCCCGGCGTATGGATGCCCAAGCACAGGTGTACTCCTC
CATCCACTACCGACGTGAGGAGCTCCTGGGAGCGCTAGCCCGAAAGACCG
AACAATATAATACTTCGGCTTCATGACCGTCGCCGCAATGTTCATCCCTT
GAATAATGCCCTCAGCGCATATAGTAGGGTCCTTCAAACGCTCCCCCGTG
CCTCGACGCAGGATATCGACACCTACCGGAACTGGATGAAGCAAACCAAC
CCCGTCATCACCGCTGAGACACGTTTCCTCGATTACTCCAAAGACCTTAT
CTCTCTAACTCCACGCATGGCTTCTACATCGACCGCGAAGCCTATCTTCA
CCACCATCATCATTGCCTCTACGGCCATTCTCCTACCATTGCTCGCATTC
AGCATGATCTCTGAGTTCTCCGGTCGTCTTGTTGTAGTCGCACTCGTAGG
AGTCGCTGCGTCCATCATTGCCTCCACCAACTCCACCAGCGCAGACCAGC
TCGTTGACTCTCGAGATGGCTGGAGATGTGCCACTATATGCCATTCTACT
CTAGCTCTACTCGTTCCAAAAAGTCTAAAAAAGATGGGACGAGCAGAGCG
TCCACGGCTTCGGTCATTTCTTCGAATTCGCATTCCACCAAAGGCCCCAA
ACTGTCAGTGGACAAACCCAAGGTAGACAGCCAAACCCAATCTACTATAT
CAAAGAGCAACAGCAACGGGTCCACAACGCGGCCACAAGCAACTCAGAAC
AAGCATGATTCCGATCGCAAAGCACCCAACGTGTTCGAGTACCTCGAAGA
CAATTCGACTACAACGGATGATTCGTCTGATGACGAGTACGAACATCATC
AGCTACATAGCGTACCCAACAATAATGCCAAGGGGGCATACAAGAACGCT
GTCCGTCAGATGTATCGCCCCGCCGCTCAAGGGACTGATACCCGCAGCCG
TACTTCGTCCATAATGTCCAAGTCCTCAGCGAACACTCAGAAGACTCCTA
GCTCAATTGACATTTCCCCAAGCACCGTCACCTCAAACACAGTGAAGAAC
CACATCCCCGCACATAAACCCTCACTGGATGGGGCATACAGTGCGGTAGG
GGCGTTCCCCGACGGCTCGAACTACTATGAGAAACGAAGCGTGGATTTGA
ACGCAAGACCGGAGACCTATTACCCTCAGAATTCTGTCTCTCTTCATCGG
TCGCCACTACCCCCATCACCGCCGCGAAGCCCTGAAGAAGACCTTCACCG
GCCCACACGGCGGAACAGACGCAACACCAAATCCTCCTCAGAGATCTCCG
GATATAGCCTTCTCGCTACCCGGCTGAGCTCGGCCACAGAGAGCCAAGAG
CCCCGTCTCCCTCCTCTGTATCGCCGGTTTGAGAATCTCAACCATCGCGT
CCTGCTTCATCTTCAGGACGAGATCGCACAAATGGAGGAAGACCTGCGTC
TAGTGGACGAGTATGAGGAATTGCAACGGGCCGCGACGGCCGAACAAGAG
GGGACAAAAATGCTCCCTGCCTCCCGGCGTATGGATGCCCAAGCACAGGT
GTACTCCTCCATCCACTACCGACGTGAGGAGCTCCTGGGAGCGCTAGCCC
GAAAGACCGAACAATATAATACTTCGGCTTCATGACCGTCGCCGCAATGT
TCATCCCTTGAATAATGCCCTCAGCGCATATAGTAGGGTCCTTCAAACGC
TCCCCCGTGCCTCGACGCAGGATATCGACACCTACCGGAACTGGATGAAG
CAAACCAACCCCGTCATCACCGCTGAGACACGTTTCCTCGATTACTCCAA
AGACCTTATCTCTCTAACTCCACGCATGGCTTCTACATCGACCGCGAAGC
CTATCTTCACCACCATCATCATTGCCTCTACGGCCATTCTCCTACCATTG
CTCGCATTCAGCATGATCTCTGAGTTCTCCGGTCGTCTTGTTGTAGTCGC
ACTCGTAGGAGTCGCTGCGTCCATCATTGCCTCCACCAACTCCACCAGCG
CAGACCAGCTCGTTGACTCTCGAGATGGCTGGAGATGTGCCACTATATGC
CATTCTACTCTAGCTCTACTCGTTCCAAAAAGTCTAAAAAAGATGGGACG
AGCAGAGCGTCCACGGCTTCGGTCATTTCTTCGAATTCGCATTCCACCAA
AGGCCCCAAACTGTCAGTGGACAAACCCAAGGTAGACAGCCAAACCCAAT
CTACTATATCAAAGAGCAACAGCAACGGGTCCACAACGCGGCCACAAGCA
ACTCAGAACAAGCATGATTCCGATCGCAAAGCACCCAACGTGTTCGAGTA
CCTCGAAGACAATTCGACTACAACGGATGATTCGTCTGATGACGAGTACG
AACATCATCAGCTACATAGCGTACCCAACAATAATGCCAAGGGGGCATAC
AAGAACGCTGTCCGTCAGATGTATCGCCCCGCCGCTCAAGGGACTGATAC
CCGCAGCCGTACTTCGTCCATAATGTCCAAGTCCTCAGCGAACACTCAGA
AGACTCCTAGCTCAATTGACATTTCCCCAAGCACCGTCACCTCAAACACA
GTGAAGAACCACATCCCCGCACATAAACCCTCACTGGATGGGGCATACAG
TGCGGTAGGGGCGTTCCCCGACGGCTCGAACTACTATGAGAAACGAAGCG
TGGATTTGAACGCAAGACCGGAGACCTATTACCCTCAGAATTCTGTCTCT
CTTCATCGGTCGCCACTACCCCCATCACCGCCGCGAAGCCCTGAAGAAGA
CCTTCACCGGCCCACACGGCGGAACAGACGCAACACCAAATCCTCCTCAG
AGATCTCCGGATATAGCCTTCTCGCTACCCGGCTGAGCTCGGCCACAGAG
AGCCAAGAGCCCCGTCTCCCTCCTCTGTATCGCCGGTTTGAGAATCTCAA
CCATCGCGTCCTGCTTCATCTTCAGGACGAGATCGCACAAATGGAGGAAG
ACCTGCGTCTAGTGGACGAGTATGAGGAATTGCAACGGGCCGCGACGGCC
GAACAAGAGGGGACAAAAATGCTCCCTGCCTCCCGGCGTATGGATGCCCA
AGCACAGGTGTACTCCTCCATCCACTACCGACGTGAGGAGCTCCTGGGAG
CGCTAGCCCGAAAGACCGAACAATATA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006031-T1.utr3p1 | KJC3_006031-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4455365..4457313 - |
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