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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4514510..4517378+ Legend: five_prime_UTRexonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006052-T1 ID=KJC3_006052-T1|Name=KJC3_006052-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2869bp|location=Sequence derived from alignment at ch4:4514510..4517378+ (Aspergillus niger KJC3)
TTCCCACCTTTATCGAAGGAGAGGTGCTCAGCTGTTCCACCAATTCGTGC
GCAGGGAAGCTTCTTATAAAGGCTTCGATTGCGTCTTCAATCTGCGACTT
TCCAGCGCATTTTAGATAGCTGTCGCAAGAAATCTTCCTTTGCATAGATC
TAGTGCAGAGGCTGCGTTAATTCCTTGACTGTTTGCGCTTGCTTTTGCTC
TTTCTTCTGCGTTTTCTTTAACCTTTTTTTCTTCCTAGCGTGAGTGTTCT
AATTGAGGAGACCACCGACTGACACCAGTGCAGGGCGGTTCATTACCATC
TTGTCGGCCCAGCCGTGTGGCTAGTATTGCGTGAGGTTGGTAACTCTCGG
CGCTGGACGTGAATTCCAGCACAGTAACACGGTGCAGAAAGCTTACGCAT
TTAAATCCTCCAGATCCGACCAAACACCAAGGTCTGTCAATCCGTCGGTC
AAGCACCTTGCGATAAGCGCTCGAAGAAAGAGTCCCTTTTCGCCCACCAT
GCTGTCCACGGCGCACAGCAACCTTCATGAGCGACATCGACAACACAGGC
GGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTGAAAGCCCCCAGCCTT
CCGGCGCAAGCGATACATCGTTATCATGCCCATCGTCGAGGACAGAGCTT
TGACAACAGAGCTTTGCGCGTCCAGCGATCGCAATCCATGCAAGATGGTA
CAAATCATACTACTAACTCTACAGTACCGCAGCAGCACCATTCGAATATG
CTCGGGGACAGCCAACACCAACGATACCTGTGTGTAGCGCAGCCGTCGTT
TCCCCAGCAATCAGCCCCCATGCCCATGATCCCCGACTGTTTCACCCCGG
AAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAGGACAGTCAACCAAGC
ATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGTTCCGCACATGAACAT
GCAGTTCGATCTGATGCAACAACAACAGATGCACAGCGCTAAGGTCCCGT
GCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACGGGACTTTGGGACTTT
TACCAGCCAACTTTTCCCCCTCACGCTGATGTAAGGAAGTTATCGGTGCA
GTCGGATGCTACTCCGTCTCAGCACCCGCATACGCCTAAGCCCGGCAATA
CACGTACGTTTATGGCTCTGTCGGCTCTTTTCTATGCACAACTTGCTAAT
CTGTTGTGTAGACTATGCCCCGATTACACCAGCAACAACACCATTCAAGC
AAACCGTGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGGATCCACC
AAAGACCAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGTACATGCA
GCGAGCAAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACGCAGCAGA
AGTTTGATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGTGGATAAC
TTTGATACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTCCTAAATC
GGAAAGTCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCATCATCAT
CCTTCATGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGAAGATGGA
GGTGCAAAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCAGCCGTCC
GCATCACAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCCAAGCCAA
AGCTTTCTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGACGCTCGC
GTGCAAGCATCAATCAAAGAAACGGGTGTCACCATTGACGAGATTGCGTC
GTACATTCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGCCTGCACC
CCGGCTGCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTCACATGTC
CAGACTCACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCAATAAGTG
CTTTGTTCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCATACCGGCG
ACAAGCCTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACACGACGCC
TTGACTCGACACAGACAGCGGGGTATGTGCATTGGCGGCTACAAGGGAAT
TGTGCGCAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGACCAGAGA
TGGATGAGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGATTGCAGAG
AAGTCATCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACACGCCTCC
TTCCGAAGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCGGCGGAAG
AGATGCCAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGAGGTTTTC
ACATTCACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCAAGCCATC
GCCTTCTCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGATGAAATGC
TTCCTTCCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCACGGACTCC
AGCTTGCCTTACATGTCTGATCCGGAGACATGCCCGTACACAGATGCTTC
CGGCGCTGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCCACCCTGT
CAGAATCGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCAGGATTCG
ACCTCTGGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATCCCGACAT
GGCCCCGTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGTGGTCTGG
AACTGTTCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGCCGACGAC
TTCTTCTTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTATGACCAA
AGAATTCTTCATGGACTAA back to topCoding sequence (CDS) from alignment at ch4:4514510..4517378+ >KJC3_006052-T1 ID=KJC3_006052-T1|Name=KJC3_006052-T1|organism=Aspergillus niger KJC3|type=CDS|length=4626bp|location=Sequence derived from alignment at ch4:4514510..4517378+ (Aspergillus niger KJC3)
ATGCTGTCCACGGCGCACAGCAACCTTCATGAGCGACATCGACAACACAG
GCGGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTGAAAGCCCCCAGCC
TTCCGGCGCAAGCGATACATCGTTATCATGCCCATCGTCGAGGACAGAGC
TTTGACAACAGAGCTTTGCGCGTCCAGCGATCGCAATCCATGCAAGATGG
TACAAATCATACTACTAACTCTACAGTACCGCAGCAGCACCATTCGAATA
TGCTCGGGGACAGCCAACACCAACGATACCTGTGTGTAGCGCAGCCGTCG
TTTCCCCAGCAATCAGCCCCCATGCCCATGATCCCCGACTGTTTCACCCC
GGAAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAGGACAGTCAACCAA
GCATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGTTCCGCACATGAAC
ATGCAGTTCGATCTGATGCAACAACAACAGATGCACAGCGCTAAGGTCCC
GTGCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACGGGACTTTGGGACT
TTTACCAGCCAACTTTTCCCCCTCACGCTGATGTAAGGAAGTTATCGGTG
CAGTCGGATGCTACTCCGTCTCAGCACCCGCATACGCCTAAGCCCGGCAA
TACACACTATGCCCCGATTACACCAGCAACAACACCATTCAAGCAAACCG
TGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGGATCCACCAAAGAC
CAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGTACATGCAGCGAGC
AAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACGCAGCAGAAGTTTG
ATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGTGGATAACTTTGAT
ACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTCCTAAATCGGAAAG
TCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCATCATCATCCTTCA
TGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGAAGATGGAGGTGCA
AAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCAGCCGTCCGCATCA
CAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCCAAGCCAAAGCTTT
CTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGACGCTCGCGTGCAA
GCATCAATCAAAGAAACGGGTGTCACCATTGACGAGATTGCGTCGTACAT
TCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGCCTGCACCCCGGCT
GCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTCACATGTCCAGACT
CACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCAATAAGTGCTTTGT
TCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCATACCGGCGACAAGC
CTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACACGACGCCTTGACT
CGACACAGACAGCGGGGTATGTGCATTGGCGGCTACAAGGGAATTGTGCG
CAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGACCAGAGATGGATG
AGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGATTGCAGAGAAGTCA
TCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACACGCCTCCTTCCGA
AGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCGGCGGAAGAGATGC
CAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGAGGTTTTCACATTC
ACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCAAGCCATCGCCTTC
TCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGATGAAATGCTTCCTT
CCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCACGGACTCCAGCTTG
CCTTACATGTCTGATCCGGAGACATGCCCGTACACAGATGCTTCCGGCGC
TGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCCACCCTGTCAGAAT
CGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCAGGATTCGACCTCT
GGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATCCCGACATGGCCCC
GTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGTGGTCTGGAACTGT
TCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGCCGACGACTTCTTC
TTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTATGACCAAAGAATT
CTTCATGGACTAAATGCTGTCCACGGCGCACAGCAACCTTCATGAGCGAC
ATCGACAACACAGGCGGCAGATCTCGACGCCGTCCGCTCTTGATGCCGTG
AAAGCCCCCAGCCTTCCGGCGCAAGCGATACATCGTTATCATGCCCATCG
TCGAGGACAGAGCTTTGACAACAGAGCTTTGCGCGTCCAGCGATCGCAAT
CCATGCAAGATGGTACAAATCATACTACTAACTCTACAGTACCGCAGCAG
CACCATTCGAATATGCTCGGGGACAGCCAACACCAACGATACCTGTGTGT
AGCGCAGCCGTCGTTTCCCCAGCAATCAGCCCCCATGCCCATGATCCCCG
ACTGTTTCACCCCGGAAGAGGTGCAAAACCTTCAAAGTCACAATGGCCAG
GACAGTCAACCAAGCATGGCCTACCTGAATGCGCCCTTCGCAAAGGACGT
TCCGCACATGAACATGCAGTTCGATCTGATGCAACAACAACAGATGCACA
GCGCTAAGGTCCCGTGCGGGTCTGGAACGGAAGGTCAATTTTTCGAGACG
GGACTTTGGGACTTTTACCAGCCAACTTTTCCCCCTCACGCTGATGTAAG
GAAGTTATCGGTGCAGTCGGATGCTACTCCGTCTCAGCACCCGCATACGC
CTAAGCCCGGCAATACACACTATGCCCCGATTACACCAGCAACAACACCA
TTCAAGCAAACCGTGGGCCTAGCTCAGTACGGTGGGGACATCCAGTCAGG
ATCCACCAAAGACCAGGGTAGCGCGATGCCCGGATCAGCCCAGTCGTCGT
ACATGCAGCGAGCAAAGTCTCTCCAAGGCGTGGCTGGAACCACTTTCACG
CAGCAGAAGTTTGATGTCTCTACCCCCCCGAACACAGCATCATTTGAAGT
GGATAACTTTGATACTTTTAACTATGAGCAGGGTTCTAGCTTTGAGGTTC
CTAAATCGGAAAGTCTGTCACAAAGCCAGTATGCATCGTCGTCGTCGGCA
TCATCATCCTTCATGTCATCTCCCGAGCTTGCGGCTATGCCTTGCCCCGA
AGATGGAGGTGCAAAGACCCCCAAAATCCCTATCTATCCCGCCACTCCCA
GCCGTCCGCATCACAGGAAAACGCCCAGTGCAACACCTAGCTCATCGGCC
AAGCCAAAGCTTTCTCCGCGCGTCGCGTCTATCGATAACCTGAACCTCGA
CGCTCGCGTGCAAGCATCAATCAAAGAAACGGGTGTCACCATTGACGAGA
TTGCGTCGTACATTCATGGGCCGGACCCGGAGGACGGGAAATGGGTATGC
CTGCACCCCGGCTGCGAGCGCCGCTTTGGAAGAAAAGAGAATATCAAGTC
ACATGTCCAGACTCACCTGGGCGACCGCCAGTACAAGTGCGATCATTGCA
ATAAGTGCTTTGTTCGCGGCCATGACCTTAAGCGTCATGCTAAGATCCAT
ACCGGCGACAAGCCTTACGAGTGCCTCTGTGGAAATGTATTTGCGAGACA
CGACGCCTTGACTCGACACAGACAGCGGGGTATGTGCATTGGCGGCTACA
AGGGAATTGTGCGCAAGACAACGAAACGGGGTCGTCCGAAGAAGCACCGA
CCAGAGATGGATGAGAGACAAGACAAAGCATCGAGAACGCGTCAGAGGAT
TGCAGAGAAGTCATCTTTCGACTCGTCCACATCCGAGTCCTCACGCAACA
CGCCTCCTTCCGAAGTTTTCGAAAACATGAGCCTGCATGGTTCTAGCCCG
GCGGAAGAGATGCCAGTGTTCAACAACCCCAACTACTCGTTGCCACCAGA
GGTTTTCACATTCACGCCTCCTGCATCTCCCGGTTACAGCGTGGGAATCA
AGCCATCGCCTTCTCGGGACGAGCGATCGATCACCCCCAGCTCAGAAGAT
GAAATGCTTCCTTCCTCGCCATCAAAGCAGCCCCTCGAGAGCCTCGTCAC
GGACTCCAGCTTGCCTTACATGTCTGATCCGGAGACATGCCCGTACACAG
ATGCTTCCGGCGCTGCTAGCCATTCTCTATCTTCACCCCATGCCGCTCCC
ACCCTGTCAGAATCGTCTAACGGCTCGGATCTCGACATTTTTATTAGCCA
GGATTCGACCTCTGGTTTTGGAAAGCCCGAGTTTGGAGACCTGGCTGATC
CCGACATGGCCCCGTTCCCAGACTATGTGAACACGACGTCCTTTGAAGGT
GGTCTGGAACTGTTCCCCAACAAGCCCTTCTCCTCGGGCCCCGTCATGGC
CGACGACTTCTTCTTCCAATTTCAAGTGGACGAACAAGCCTCGGATGTTA
TGACCAAAGAATTCTTCATGGACTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4514510..4517378 + |
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