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KJC3_006056-T1, KJC3_006056-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006056-T1
Unique NameKJC3_006056-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4526909..4528348-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006056-T1 ID=KJC3_006056-T1|Name=KJC3_006056-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1440bp|location=Sequence derived from alignment at ch4:4526909..4528348- (Aspergillus niger KJC3)
CTACCGTTTCTCGTCATCATCTGCTGAACATCGGTGCCTACTACACAGCT
CTTGCCGTATTGAAAATGTCGTCGTCGCACTTTCCAAAACGACACCATTA
GCCCCGGCGACACAACCCTGTCAACACACACAACACGTTTGAATTCTTTT
TATCTTTCTGCTGAAATCCTTTTCTTCTTCTTCTTCTCCTTCTTCTCCTC
CTTTCTTGCTCCCAACCTTCTTCCCAGTCTTCCATCCTTCGCCTCATCAC
GGTTCGCCGTCTCTCTCTATCGAAACTGTTAACTTACCAGCAACTCTTCG
TTTATTTCTTTCCTCGTCTTACTGACACGAATTCGGTTTCACGTCGCGAG
TCTAGTGGTTCTCCAGTTAAAAAAATGAAGATCTTCATTCTTCTCGCCAT
CTGGCTGCTCGCCAGCTTGGGCTACGCAACTAGTAGGTACTACACTCCAA
CTGTCTTCTTCATCTGCTAACGCTCTTAGGTTTCGTTGGCAATATGGCTG
AAGTGTACCATGAGATTACTGATGTCCTTCGTGGCCGTAAGTGTTACGAA
GATGGTAGCTGAGGGTCCAATATACTGACTAGGCTTGGACAATAATATAG
CCCACCATGCGGCTCACTTTGCCAAACTGAACGGCGGTAAGCCTAAGCCC
GATAAGCCTAAGGGTGTTGGGAAGACCCTGGATGATGGTAAGCTTGGAAG
GACTCCTAATAAGAAACTTGAGTACTGATTCAGCTCTAGTTGTCACCTTG
ACTGTCTGTAAGACAGACGTGTCCCTCGCCCCCACCGTTGGAACTTTTTC
GTTGCCAACCATCGTGACCGCTGCGACTTTGGCTCCAACTGTTGTCGTGA
CCGGTGTTGTGCCCACTGAGATTTCTATTGGACTGCCCACTGAGTTTGCT
CCTGAAATTCAAACTGGAGTCCTTACTGGTGAATCTCATTCCACTGATAC
GACTGTTGTGCCAACCAACTCTGTGGTCTCAGGACTGTCCTCCTTCCTGA
CTGGAAGTCAAACTGTCTCTGAGATAACTGGCTCCACTGAAAACCACACT
ATCACCACCGAAATCAATGCATCGGCTGTCACCAGCACCTTTGCCCATAC
CACGTTCCCTACCGCAAATGCTGGGAACGACCATGAGGGCATGGCTTCGT
CCGCAGTTGCGTTGTTGGTTGCTTTGATCTTTAGTCTCGTGCGTATCTGA
TGAATGTCCTTCCATACCTCCACATTTCTTTAAACTCGCCTAGCAGGGCT
GTGTGCGAAGATCCAGTGAGGTTGACCACGTTCTTCGGATCGAAAAGCGG
GTTTTGTGTTTGCTTTCATTTTTTCTTATGTTGTTTCGGGATGCAGCTCA
CAAGAGCATGCCATTTGAATTTCTCAACGGAATGGTGTAACTAATGACCG
CGGCAAGAAACCGCTTGATCTAATTCAAAGCCTAACGGGC
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Coding sequence (CDS) from alignment at ch4:4526909..4528348-

>KJC3_006056-T1 ID=KJC3_006056-T1|Name=KJC3_006056-T1|organism=Aspergillus niger KJC3|type=CDS|length=2652bp|location=Sequence derived from alignment at ch4:4526909..4528348- (Aspergillus niger KJC3)
TTGTCACCTTGACTGTCTGTAAGACAGACGTGTCCCTCGCCCCCACCGTT
GGAACTTTTTCGTTGCCAACCATCGTGACCGCTGCGACTTTGGCTCCAAC
TGTTGTCGTGACCGGTGTTGTGCCCACTGAGATTTCTATTGGACTGCCCA
CTGAGTTTGCTCCTGAAATTCAAACTGGAGTCCTTACTGGTGAATCTCAT
TCCACTGATACGACTGTTGTGCCAACCAACTCTGTGGTCTCAGGACTGTC
CTCCTTCCTGACTGGAAGTCAAACTGTCTCTGAGATAACTGGCTCCACTG
AAAACCACACTATCACCACCGAAATCAATGCATCGGCTGTCACCAGCACC
TTTGCCCATACCACGTTCCCTACCGCAAATGCTGGGAACGACCATGAGGG
CATGGCTTCGTCCGCAGTTGCGTTGTTGGTTGCTTTGATCTTTAGTCTCG
TGCGTATCTGACCCACCATGCGGCTCACTTTGCCAAACTGAACGGCGGTA
AGCCTAAGCCCGATAAGCCTAAGGGTGTTGGGAAGACCCTGGATGATGGT
TTCGTTGGCAATATGGCTGAAGTGTACCATGAGATTACTGATGTCCTTCG
TGGCCATGAAGATCTTCATTCTTCTCGCCATCTGGCTGCTCGCCAGCTTG
GGCTACGCAACTATTGTCACCTTGACTGTCTGTAAGACAGACGTGTCCCT
CGCCCCCACCGTTGGAACTTTTTCGTTGCCAACCATCGTGACCGCTGCGA
CTTTGGCTCCAACTGTTGTCGTGACCGGTGTTGTGCCCACTGAGATTTCT
ATTGGACTGCCCACTGAGTTTGCTCCTGAAATTCAAACTGGAGTCCTTAC
TGGTGAATCTCATTCCACTGATACGACTGTTGTGCCAACCAACTCTGTGG
TCTCAGGACTGTCCTCCTTCCTGACTGGAAGTCAAACTGTCTCTGAGATA
ACTGGCTCCACTGAAAACCACACTATCACCACCGAAATCAATGCATCGGC
TGTCACCAGCACCTTTGCCCATACCACGTTCCCTACCGCAAATGCTGGGA
ACGACCATGAGGGCATGGCTTCGTCCGCAGTTGCGTTGTTGGTTGCTTTG
ATCTTTAGTCTCGTGCGTATCTGACCCACCATGCGGCTCACTTTGCCAAA
CTGAACGGCGGTAAGCCTAAGCCCGATAAGCCTAAGGGTGTTGGGAAGAC
CCTGGATGATGGTTTCGTTGGCAATATGGCTGAAGTGTACCATGAGATTA
CTGATGTCCTTCGTGGCCATGAAGATCTTCATTCTTCTCGCCATCTGGCT
GCTCGCCAGCTTGGGCTACGCAACTATTGTCACCTTGACTGTCTGTAAGA
CAGACGTGTCCCTCGCCCCCACCGTTGGAACTTTTTCGTTGCCAACCATC
GTGACCGCTGCGACTTTGGCTCCAACTGTTGTCGTGACCGGTGTTGTGCC
CACTGAGATTTCTATTGGACTGCCCACTGAGTTTGCTCCTGAAATTCAAA
CTGGAGTCCTTACTGGTGAATCTCATTCCACTGATACGACTGTTGTGCCA
ACCAACTCTGTGGTCTCAGGACTGTCCTCCTTCCTGACTGGAAGTCAAAC
TGTCTCTGAGATAACTGGCTCCACTGAAAACCACACTATCACCACCGAAA
TCAATGCATCGGCTGTCACCAGCACCTTTGCCCATACCACGTTCCCTACC
GCAAATGCTGGGAACGACCATGAGGGCATGGCTTCGTCCGCAGTTGCGTT
GTTGGTTGCTTTGATCTTTAGTCTCGTGCGTATCTGACCCACCATGCGGC
TCACTTTGCCAAACTGAACGGCGGTAAGCCTAAGCCCGATAAGCCTAAGG
GTGTTGGGAAGACCCTGGATGATGGTTTCGTTGGCAATATGGCTGAAGTG
TACCATGAGATTACTGATGTCCTTCGTGGCCATGAAGATCTTCATTCTTC
TCGCCATCTGGCTGCTCGCCAGCTTGGGCTACGCAACTATTGTCACCTTG
ACTGTCTGTAAGACAGACGTGTCCCTCGCCCCCACCGTTGGAACTTTTTC
GTTGCCAACCATCGTGACCGCTGCGACTTTGGCTCCAACTGTTGTCGTGA
CCGGTGTTGTGCCCACTGAGATTTCTATTGGACTGCCCACTGAGTTTGCT
CCTGAAATTCAAACTGGAGTCCTTACTGGTGAATCTCATTCCACTGATAC
GACTGTTGTGCCAACCAACTCTGTGGTCTCAGGACTGTCCTCCTTCCTGA
CTGGAAGTCAAACTGTCTCTGAGATAACTGGCTCCACTGAAAACCACACT
ATCACCACCGAAATCAATGCATCGGCTGTCACCAGCACCTTTGCCCATAC
CACGTTCCCTACCGCAAATGCTGGGAACGACCATGAGGGCATGGCTTCGT
CCGCAGTTGCGTTGTTGGTTGCTTTGATCTTTAGTCTCGTGCGTATCTGA
CCCACCATGCGGCTCACTTTGCCAAACTGAACGGCGGTAAGCCTAAGCCC
GATAAGCCTAAGGGTGTTGGGAAGACCCTGGATGATGGTTTCGTTGGCAA
TATGGCTGAAGTGTACCATGAGATTACTGATGTCCTTCGTGGCCATGAAG
ATCTTCATTCTTCTCGCCATCTGGCTGCTCGCCAGCTTGGGCTACGCAAC
TA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006056KJC3_006056Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006056-T1KJC3_006056-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006056-T1.cdsKJC3_006056-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006056-T1.utr3p1KJC3_006056-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006056-T1.exon4KJC3_006056-T1.exon4Aspergillus niger KJC3exon
KJC3_006056-T1.exon3KJC3_006056-T1.exon3Aspergillus niger KJC3exon
KJC3_006056-T1.exon2KJC3_006056-T1.exon2Aspergillus niger KJC3exon
KJC3_006056-T1.exon1KJC3_006056-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006056-T1.utr5p1KJC3_006056-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteSECRETED:SignalP(1-20)
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4526909..4528348 -
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