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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4574991..4576907- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006066-T1 ID=KJC3_006066-T1|Name=KJC3_006066-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1917bp|location=Sequence derived from alignment at ch4:4574991..4576907- (Aspergillus niger KJC3)
ATGGCGACCGATATCGCTACCCGGGATCTTCGGAAACCCATCACGGTTGC
GGAGTACCTCTTCCGTCGTCTACACGAGGTTGGCGTTCGCTCTGTGCATG
GCGTTCCAGGTGACTACAATCTCGCGGCCTTGGACTATCTGCCAAAGTGC
GGTCTCCATTGGGTGGGCAATTGCAATGAACTTAACGCCGGTATGCTTTG
AGCCGAATCCACTGTTGTAATTGTACTACCTTGGTGACAAGTATTGTCAT
AACTGACGCGGACAACCTACAGGATACGCTGCCGACGGCTATGCTCGTGT
AAATGGAATCGGAGCCCTGATCACTACCTTCGGTGTGGGTGAGCTTTCGG
CGCTCAATGCCATCGCTGGTTCGTACTCCGAATTTGTGCCAGTTGTTCAT
ATTGTGGGTCAGCCCAACACCAAGTCTCAGAAGGATGGCATGTTGCTGCA
CCACACCTTGGGAAATGGCGACTTCAATGTGTTTGCGAAGATGAGTGCAG
GCATCTCCTGTACCCTCGGTCGCCTTAACGAGACACTGGAGGCTGCAACA
CTTATCGACAACGCCATCCGTGAATGTTGGATTCGCAGTCGACCTGTCTA
CATCAGTCTCCCCACCGACATGATTGTCAAGCAGATTGAAGGTGACCGCC
TCGACAAACCGCTGGATCTTTCTCTACCGGCGAATGACCCTGAGAAGGAA
GATTATGTGGTGGACGTTGTCTTGAAGTACCTGCATGCTGCGAAGAAACC
TGTTATTCTGGTGGATGCTTGTGCCATCCGTCATCGGGTCCTTGATGAAG
TTCATGACTTGATGGAGGCCTCCGGCCTGCCTACTTTCGTGGCTCCGATG
GGCAAGGGAGCAGTGGATGAGACCCGTCCGAACTATGGCGGTGTGTATGC
TGGTACTGGATCGAACGCGGGTGTTCGTGAGCAAGTCGAGTCTTCCGATC
TTATTCTGAGCATCGGTGCTATCAAGTCGGACTTCAACACCAGCGGATTC
TCATATCACATCGGACAGCTCAACACCATCGATTTCCACAGCACTTACGT
GCGCGTGCGATACTCCGAATATCCAGAGATCAATATGAAGGGAGTCTTGC
GCAAAGTTATTCAGAGGATGGGTGCTGTCAACGCCGCGCCAGTTCCGCAT
CTCTCCAACACGCTTCCCGAGAGCGAGAAATCTTCCAGCAGCCAGGAGAT
CACGCACGACTGGCTTTGGCCCAATGTGGGTCAGTGGCTGAAGGAGAATG
ACATTGTTATCACCGAGACTGGGACTGCCAACTTTGGCATCTGGGAAACC
CGATTCCCGGCGAACGTCACGGCCATTAGCCAAGTCCTGTGGGGTAGCAT
TGGCTACTCGGTTGGGGCGTGTCAAGGTGCTGCACTAGCAGCGAAGGAAT
TGGGCAATCGTCGGACCGTTCTCTTCGTTGGTGACGGAAGTCTTCAACTC
ACTGTGCAGGAGTTGAGCACCATGATCAGAAACAACCTCAACCCCATCAT
GTGAGTGTTCCCTAACGGCGATAAGCTCCACGCTATAACGATACTGACCA
AAGCAAGCTTCGTCATCTGCAATAACGGATACACCATTGAGCGGTACATC
CACGGATGGGACGAAAGCTACAATGACATCCAGCCATGGGATATTGAGGG
TCTGCCCCGAGTCTTTGGAGCCAAGGACAAGTACAAGGGCTACAAAGTGA
AGACAAGGGATGAGCTGAGGCAGCTATTTGCGAACCAGGAGTTTGCTTCT
GCGCCATACTTGCAGGTACGTAGTACATTCATTGCCTTGACGTTTCGACT
GTGTCCAGGAGAGTGCTAACCAAGACGGCACAGTTGGTGGAGCTTCACAT
GCCTCGTGATGATGCTCCCGCCGCGTTGAAAATCACGGCTGAGGCGGCTG
CCACCAGGAACAAGTAA back to topCoding sequence (CDS) from alignment at ch4:4574991..4576907- >KJC3_006066-T1 ID=KJC3_006066-T1|Name=KJC3_006066-T1|organism=Aspergillus niger KJC3|type=CDS|length=6840bp|location=Sequence derived from alignment at ch4:4574991..4576907- (Aspergillus niger KJC3)
TTGGTGGAGCTTCACATGCCTCGTGATGATGCTCCCGCCGCGTTGAAAAT
CACGGCTGAGGCGGCTGCCACCAGGAACAAGTAACTTCGTCATCTGCAAT
AACGGATACACCATTGAGCGGTACATCCACGGATGGGACGAAAGCTACAA
TGACATCCAGCCATGGGATATTGAGGGTCTGCCCCGAGTCTTTGGAGCCA
AGGACAAGTACAAGGGCTACAAAGTGAAGACAAGGGATGAGCTGAGGCAG
CTATTTGCGAACCAGGAGTTTGCTTCTGCGCCATACTTGCAGGATACGCT
GCCGACGGCTATGCTCGTGTAAATGGAATCGGAGCCCTGATCACTACCTT
CGGTGTGGGTGAGCTTTCGGCGCTCAATGCCATCGCTGGTTCGTACTCCG
AATTTGTGCCAGTTGTTCATATTGTGGGTCAGCCCAACACCAAGTCTCAG
AAGGATGGCATGTTGCTGCACCACACCTTGGGAAATGGCGACTTCAATGT
GTTTGCGAAGATGAGTGCAGGCATCTCCTGTACCCTCGGTCGCCTTAACG
AGACACTGGAGGCTGCAACACTTATCGACAACGCCATCCGTGAATGTTGG
ATTCGCAGTCGACCTGTCTACATCAGTCTCCCCACCGACATGATTGTCAA
GCAGATTGAAGGTGACCGCCTCGACAAACCGCTGGATCTTTCTCTACCGG
CGAATGACCCTGAGAAGGAAGATTATGTGGTGGACGTTGTCTTGAAGTAC
CTGCATGCTGCGAAGAAACCTGTTATTCTGGTGGATGCTTGTGCCATCCG
TCATCGGGTCCTTGATGAAGTTCATGACTTGATGGAGGCCTCCGGCCTGC
CTACTTTCGTGGCTCCGATGGGCAAGGGAGCAGTGGATGAGACCCGTCCG
AACTATGGCGGTGTGTATGCTGGTACTGGATCGAACGCGGGTGTTCGTGA
GCAAGTCGAGTCTTCCGATCTTATTCTGAGCATCGGTGCTATCAAGTCGG
ACTTCAACACCAGCGGATTCTCATATCACATCGGACAGCTCAACACCATC
GATTTCCACAGCACTTACGTGCGCGTGCGATACTCCGAATATCCAGAGAT
CAATATGAAGGGAGTCTTGCGCAAAGTTATTCAGAGGATGGGTGCTGTCA
ACGCCGCGCCAGTTCCGCATCTCTCCAACACGCTTCCCGAGAGCGAGAAA
TCTTCCAGCAGCCAGGAGATCACGCACGACTGGCTTTGGCCCAATGTGGG
TCAGTGGCTGAAGGAGAATGACATTGTTATCACCGAGACTGGGACTGCCA
ACTTTGGCATCTGGGAAACCCGATTCCCGGCGAACGTCACGGCCATTAGC
CAAGTCCTGTGGGGTAGCATTGGCTACTCGGTTGGGGCGTGTCAAGGTGC
TGCACTAGCAGCGAAGGAATTGGGCAATCGTCGGACCGTTCTCTTCGTTG
GTGACGGAAGTCTTCAACTCACTGTGCAGGAGTTGAGCACCATGATCAGA
AACAACCTCAACCCCATCATATGGCGACCGATATCGCTACCCGGGATCTT
CGGAAACCCATCACGGTTGCGGAGTACCTCTTCCGTCGTCTACACGAGGT
TGGCGTTCGCTCTGTGCATGGCGTTCCAGGTGACTACAATCTCGCGGCCT
TGGACTATCTGCCAAAGTGCGGTCTCCATTGGGTGGGCAATTGCAATGAA
CTTAACGCCGTTGGTGGAGCTTCACATGCCTCGTGATGATGCTCCCGCCG
CGTTGAAAATCACGGCTGAGGCGGCTGCCACCAGGAACAAGTAACTTCGT
CATCTGCAATAACGGATACACCATTGAGCGGTACATCCACGGATGGGACG
AAAGCTACAATGACATCCAGCCATGGGATATTGAGGGTCTGCCCCGAGTC
TTTGGAGCCAAGGACAAGTACAAGGGCTACAAAGTGAAGACAAGGGATGA
GCTGAGGCAGCTATTTGCGAACCAGGAGTTTGCTTCTGCGCCATACTTGC
AGGATACGCTGCCGACGGCTATGCTCGTGTAAATGGAATCGGAGCCCTGA
TCACTACCTTCGGTGTGGGTGAGCTTTCGGCGCTCAATGCCATCGCTGGT
TCGTACTCCGAATTTGTGCCAGTTGTTCATATTGTGGGTCAGCCCAACAC
CAAGTCTCAGAAGGATGGCATGTTGCTGCACCACACCTTGGGAAATGGCG
ACTTCAATGTGTTTGCGAAGATGAGTGCAGGCATCTCCTGTACCCTCGGT
CGCCTTAACGAGACACTGGAGGCTGCAACACTTATCGACAACGCCATCCG
TGAATGTTGGATTCGCAGTCGACCTGTCTACATCAGTCTCCCCACCGACA
TGATTGTCAAGCAGATTGAAGGTGACCGCCTCGACAAACCGCTGGATCTT
TCTCTACCGGCGAATGACCCTGAGAAGGAAGATTATGTGGTGGACGTTGT
CTTGAAGTACCTGCATGCTGCGAAGAAACCTGTTATTCTGGTGGATGCTT
GTGCCATCCGTCATCGGGTCCTTGATGAAGTTCATGACTTGATGGAGGCC
TCCGGCCTGCCTACTTTCGTGGCTCCGATGGGCAAGGGAGCAGTGGATGA
GACCCGTCCGAACTATGGCGGTGTGTATGCTGGTACTGGATCGAACGCGG
GTGTTCGTGAGCAAGTCGAGTCTTCCGATCTTATTCTGAGCATCGGTGCT
ATCAAGTCGGACTTCAACACCAGCGGATTCTCATATCACATCGGACAGCT
CAACACCATCGATTTCCACAGCACTTACGTGCGCGTGCGATACTCCGAAT
ATCCAGAGATCAATATGAAGGGAGTCTTGCGCAAAGTTATTCAGAGGATG
GGTGCTGTCAACGCCGCGCCAGTTCCGCATCTCTCCAACACGCTTCCCGA
GAGCGAGAAATCTTCCAGCAGCCAGGAGATCACGCACGACTGGCTTTGGC
CCAATGTGGGTCAGTGGCTGAAGGAGAATGACATTGTTATCACCGAGACT
GGGACTGCCAACTTTGGCATCTGGGAAACCCGATTCCCGGCGAACGTCAC
GGCCATTAGCCAAGTCCTGTGGGGTAGCATTGGCTACTCGGTTGGGGCGT
GTCAAGGTGCTGCACTAGCAGCGAAGGAATTGGGCAATCGTCGGACCGTT
CTCTTCGTTGGTGACGGAAGTCTTCAACTCACTGTGCAGGAGTTGAGCAC
CATGATCAGAAACAACCTCAACCCCATCATATGGCGACCGATATCGCTAC
CCGGGATCTTCGGAAACCCATCACGGTTGCGGAGTACCTCTTCCGTCGTC
TACACGAGGTTGGCGTTCGCTCTGTGCATGGCGTTCCAGGTGACTACAAT
CTCGCGGCCTTGGACTATCTGCCAAAGTGCGGTCTCCATTGGGTGGGCAA
TTGCAATGAACTTAACGCCGTTGGTGGAGCTTCACATGCCTCGTGATGAT
GCTCCCGCCGCGTTGAAAATCACGGCTGAGGCGGCTGCCACCAGGAACAA
GTAACTTCGTCATCTGCAATAACGGATACACCATTGAGCGGTACATCCAC
GGATGGGACGAAAGCTACAATGACATCCAGCCATGGGATATTGAGGGTCT
GCCCCGAGTCTTTGGAGCCAAGGACAAGTACAAGGGCTACAAAGTGAAGA
CAAGGGATGAGCTGAGGCAGCTATTTGCGAACCAGGAGTTTGCTTCTGCG
CCATACTTGCAGGATACGCTGCCGACGGCTATGCTCGTGTAAATGGAATC
GGAGCCCTGATCACTACCTTCGGTGTGGGTGAGCTTTCGGCGCTCAATGC
CATCGCTGGTTCGTACTCCGAATTTGTGCCAGTTGTTCATATTGTGGGTC
AGCCCAACACCAAGTCTCAGAAGGATGGCATGTTGCTGCACCACACCTTG
GGAAATGGCGACTTCAATGTGTTTGCGAAGATGAGTGCAGGCATCTCCTG
TACCCTCGGTCGCCTTAACGAGACACTGGAGGCTGCAACACTTATCGACA
ACGCCATCCGTGAATGTTGGATTCGCAGTCGACCTGTCTACATCAGTCTC
CCCACCGACATGATTGTCAAGCAGATTGAAGGTGACCGCCTCGACAAACC
GCTGGATCTTTCTCTACCGGCGAATGACCCTGAGAAGGAAGATTATGTGG
TGGACGTTGTCTTGAAGTACCTGCATGCTGCGAAGAAACCTGTTATTCTG
GTGGATGCTTGTGCCATCCGTCATCGGGTCCTTGATGAAGTTCATGACTT
GATGGAGGCCTCCGGCCTGCCTACTTTCGTGGCTCCGATGGGCAAGGGAG
CAGTGGATGAGACCCGTCCGAACTATGGCGGTGTGTATGCTGGTACTGGA
TCGAACGCGGGTGTTCGTGAGCAAGTCGAGTCTTCCGATCTTATTCTGAG
CATCGGTGCTATCAAGTCGGACTTCAACACCAGCGGATTCTCATATCACA
TCGGACAGCTCAACACCATCGATTTCCACAGCACTTACGTGCGCGTGCGA
TACTCCGAATATCCAGAGATCAATATGAAGGGAGTCTTGCGCAAAGTTAT
TCAGAGGATGGGTGCTGTCAACGCCGCGCCAGTTCCGCATCTCTCCAACA
CGCTTCCCGAGAGCGAGAAATCTTCCAGCAGCCAGGAGATCACGCACGAC
TGGCTTTGGCCCAATGTGGGTCAGTGGCTGAAGGAGAATGACATTGTTAT
CACCGAGACTGGGACTGCCAACTTTGGCATCTGGGAAACCCGATTCCCGG
CGAACGTCACGGCCATTAGCCAAGTCCTGTGGGGTAGCATTGGCTACTCG
GTTGGGGCGTGTCAAGGTGCTGCACTAGCAGCGAAGGAATTGGGCAATCG
TCGGACCGTTCTCTTCGTTGGTGACGGAAGTCTTCAACTCACTGTGCAGG
AGTTGAGCACCATGATCAGAAACAACCTCAACCCCATCATATGGCGACCG
ATATCGCTACCCGGGATCTTCGGAAACCCATCACGGTTGCGGAGTACCTC
TTCCGTCGTCTACACGAGGTTGGCGTTCGCTCTGTGCATGGCGTTCCAGG
TGACTACAATCTCGCGGCCTTGGACTATCTGCCAAAGTGCGGTCTCCATT
GGGTGGGCAATTGCAATGAACTTAACGCCGTTGGTGGAGCTTCACATGCC
TCGTGATGATGCTCCCGCCGCGTTGAAAATCACGGCTGAGGCGGCTGCCA
CCAGGAACAAGTAACTTCGTCATCTGCAATAACGGATACACCATTGAGCG
GTACATCCACGGATGGGACGAAAGCTACAATGACATCCAGCCATGGGATA
TTGAGGGTCTGCCCCGAGTCTTTGGAGCCAAGGACAAGTACAAGGGCTAC
AAAGTGAAGACAAGGGATGAGCTGAGGCAGCTATTTGCGAACCAGGAGTT
TGCTTCTGCGCCATACTTGCAGGATACGCTGCCGACGGCTATGCTCGTGT
AAATGGAATCGGAGCCCTGATCACTACCTTCGGTGTGGGTGAGCTTTCGG
CGCTCAATGCCATCGCTGGTTCGTACTCCGAATTTGTGCCAGTTGTTCAT
ATTGTGGGTCAGCCCAACACCAAGTCTCAGAAGGATGGCATGTTGCTGCA
CCACACCTTGGGAAATGGCGACTTCAATGTGTTTGCGAAGATGAGTGCAG
GCATCTCCTGTACCCTCGGTCGCCTTAACGAGACACTGGAGGCTGCAACA
CTTATCGACAACGCCATCCGTGAATGTTGGATTCGCAGTCGACCTGTCTA
CATCAGTCTCCCCACCGACATGATTGTCAAGCAGATTGAAGGTGACCGCC
TCGACAAACCGCTGGATCTTTCTCTACCGGCGAATGACCCTGAGAAGGAA
GATTATGTGGTGGACGTTGTCTTGAAGTACCTGCATGCTGCGAAGAAACC
TGTTATTCTGGTGGATGCTTGTGCCATCCGTCATCGGGTCCTTGATGAAG
TTCATGACTTGATGGAGGCCTCCGGCCTGCCTACTTTCGTGGCTCCGATG
GGCAAGGGAGCAGTGGATGAGACCCGTCCGAACTATGGCGGTGTGTATGC
TGGTACTGGATCGAACGCGGGTGTTCGTGAGCAAGTCGAGTCTTCCGATC
TTATTCTGAGCATCGGTGCTATCAAGTCGGACTTCAACACCAGCGGATTC
TCATATCACATCGGACAGCTCAACACCATCGATTTCCACAGCACTTACGT
GCGCGTGCGATACTCCGAATATCCAGAGATCAATATGAAGGGAGTCTTGC
GCAAAGTTATTCAGAGGATGGGTGCTGTCAACGCCGCGCCAGTTCCGCAT
CTCTCCAACACGCTTCCCGAGAGCGAGAAATCTTCCAGCAGCCAGGAGAT
CACGCACGACTGGCTTTGGCCCAATGTGGGTCAGTGGCTGAAGGAGAATG
ACATTGTTATCACCGAGACTGGGACTGCCAACTTTGGCATCTGGGAAACC
CGATTCCCGGCGAACGTCACGGCCATTAGCCAAGTCCTGTGGGGTAGCAT
TGGCTACTCGGTTGGGGCGTGTCAAGGTGCTGCACTAGCAGCGAAGGAAT
TGGGCAATCGTCGGACCGTTCTCTTCGTTGGTGACGGAAGTCTTCAACTC
ACTGTGCAGGAGTTGAGCACCATGATCAGAAACAACCTCAACCCCATCAT
ATGGCGACCGATATCGCTACCCGGGATCTTCGGAAACCCATCACGGTTGC
GGAGTACCTCTTCCGTCGTCTACACGAGGTTGGCGTTCGCTCTGTGCATG
GCGTTCCAGGTGACTACAATCTCGCGGCCTTGGACTATCTGCCAAAGTGC
GGTCTCCATTGGGTGGGCAATTGCAATGAACTTAACGCCG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000287 | magnesium ion binding |
| GO:0003824 | catalytic activity |
| GO:0030976 | thiamine pyrophosphate binding |
| GO:0016831 | carboxy-lyase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR029035 |
| DBxref | InterPro:IPR012000 |
| DBxref | InterPro:IPR011766 |
| DBxref | InterPro:IPR012001 |
| DBxref | InterPro:IPR012110 |
| DBxref | PFAM:PF02776 |
| DBxref | PFAM:PF00205 |
| DBxref | PFAM:PF02775 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4574991..4576907 - |
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