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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4601844..4604362- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006076-T1 ID=KJC3_006076-T1|Name=KJC3_006076-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2519bp|location=Sequence derived from alignment at ch4:4601844..4604362- (Aspergillus niger KJC3)
CCATCCTATCCCCATCCCCCTAAACAAAGGAGAGGTCAGCTACCGTTCGT
CGTCGAGGTTTCTGCCTGTGTCGACTCTCCCCGCCCGCTCCGTCGGACCG
AATTGTTGCGATAAGAGAGAGAGCCTTCCCCGGAAGGCCCCGCATAAAAC
CAGGCGTCATGGCGGAGATCCGGTCCAAGGTGCGTTGCTTTGAAAGAGAA
TGGCCCTCGTTTTCTCTCCGTCTGTTGCTGTGCGAGGGTGATGGAAATCC
GCGATTTGAGGGGAGGAATATTCTACGGCTGGATTGATGGAAGGGTGCTG
GGATTGGGTTGGGAGCGCAGTTGCATTGCAACGAGCGGGGTTTGGGCGAC
GGCAAGGAATATTGCACAAATCCATCCTGCTCCTCACCACTCGCGCCATC
ACCACCACAGACGAGACGAGAGAGAGAGAAAGCGGCAGCTTTAAACATCT
GGAAATGCGAAGGCTAACATATCATCTACTATAACAGAACCTCTACGAGC
TTCTTGGTAATTCTCGCCCTTCCCTTACCTACCTACCTACCTACCATACC
TGAGTTCTATCCTGCACTTTGCACTACCTGTCGTGTTTGACTTTGCCTTG
GTCTCTCTTTTCGCATGTCGTCGATCCATCTACACTTCGAATTCGTGAAG
GGATTACATCATTTTCTAACCTCAAGCGTGCTGTTGCTCGCGCTGCGCAA
CTACAGGCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCT
ACGAAAGCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCC
CAAGGAGGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTG
GTGGCCGCGCCACTGGCAACGAGGCCGGTATGTATTCCCACCTACGTTGA
GTTCCGACTCTTTGGCAAGTACATTCCGACTGATTTCGATTGCGTTCAGC
TTTCCGTGACCGCAACGCCGGCAGAAACAACAACCGTGAGAAGCCCACCG
ATGAGAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGT
GAGCGTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACGTAAGCCCC
TCTCTTCATCATCTTGTTCTCCATGGAGACGGGAAAAAACGAGACATGGG
ACCCAATCGAAACTGACATATCACTGGATAGCGACACCCGCAAGCAGGTG
AACCAGGGCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGATGAGAA
GGCCGGCGAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGACCCCCG
GCGAGGAGAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACGCCGAC
TACCTTGCCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCCGTCCG
TGCTCCCAACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGCCAAGG
AGCTCAAGCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGGAGGAC
AAGTCCAAGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAGGTCGA
CATGCGCTTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCGTGGCG
GCCGTGGTGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCAACGGT
CCCCGTTCCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCTGTCGC
CGTTGACGAGAAGAACTTCCCCAGCCTTGGCGGCAAATAAATGCAGTTTT
TTCCCCCTCATAAACTGGCATTTATAGGCTAGCATCCATGCATGCATGTC
CATGCTTCCCCCTCACATCTTTTTTCTTTTTCTTTCTACGCATGATCCTC
ACTACCAATAAACCCTCCCTCCCCAACGCCCCTTTTTTTCTCGCTAGCAA
ATTAGGTAGTCGAAATCCAGGGATCCAAATGAGATGAGAACGAAAATGAA
AGTTTTGTGTGTGTGCATGAGAGAGAGAAAGAAAAGAGTGTCTATGTGTG
CGTGTGTGTGCCTGCTTGCATGTGTGTATGAACTGAATCTCAAATGTGAC
AAAAACAAAAAAGGGGAAACAGACAAAAAAGGGAAAGGGTGAAATTTCGA
ACATAAGCAATGGAACAGAAGAAAAAAGATCAAAAAAATCCAAAGGTTCA
TCTGTGCAATATGCCTCTTTTATCTATCTTATCTATGGCTATGGGCCCCT
TTTCCACATATTTTTACTTTCCTCAATGCAAAGTTTCAACGTACAGTCGT
CTTCTCTTCTTATGGAATGATGAAATAATAATTATTTCTTCCTTCTCTCT
CTCTTCACCTTATCCTTTTTTGTACTTGTCCCCCCTTTGTCCATTGTCAT
TAAAATTTATCCCTCAGGAAATCTGGATGGAATAACACCCCATGTAATAA
TGTTTTGCGCTTTTAATGTTCATGTCCATGTCCATGTCCATATTCAAGGT
CATATGAAAGGAAAGTGACTTTTGACTCGAAGCGTCAATATGCTCTGCTG
GCACACCACCTTTGGCAGT back to topCoding sequence (CDS) from alignment at ch4:4601844..4604362- >KJC3_006076-T1 ID=KJC3_006076-T1|Name=KJC3_006076-T1|organism=Aspergillus niger KJC3|type=CDS|length=4560bp|location=Sequence derived from alignment at ch4:4601844..4604362- (Aspergillus niger KJC3)
CGACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGA
AGACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAG
ACCGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAA
GTCCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACC
TGAGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAG
AAGTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTA
CATCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGA
AGAACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGT
GGCCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCG
TGGCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTG
CTGCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGC
GGCAAATAACTTTCCGTGACCGCAACGCCGGCAGAAACAACAACCGTGAG
AAGCCCACCGATGAGAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGA
GGACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGA
CGCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAA
AGCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGG
AGGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGC
CGCGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAG
ATCCGGTCCAAGCGACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACC
AGAGCGGCGAGAAGACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCT
CAGACCGATGAGACCGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGA
GGCCGCCGACAAGTCCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTG
CCCAGGGTGACCTGAGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACC
AAGCTCGACAAGAAGTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGA
GGAGGATGCCTACATCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGC
AGCGCAAGGAGAAGAACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCT
CCCCGCACTGGTGGCCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGC
TCGTGGTGCTCGTGGCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCG
CTGCCGCTGCTGCTGCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTC
CCCAGCCTTGGCGGCAAATAACTTTCCGTGACCGCAACGCCGGCAGAAAC
AACAACCGTGAGAAGCCCACCGATGAGAAGGACGCCCAACGGCGCGGATT
CCGCGCCCGTGAGGACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCC
GCACCGGCCAGACGCAATGACCCTGAACTCGACCCCAACAGAGCCCCCGA
GCCCCCTACGAAAGCCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGG
ACGCTCCCAAGGAGGCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCT
CGCCGTGGTGGCCGCGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTC
TTGATGGCGGAGATCCGGTCCAAGCGACACCCGCAAGCAGGTGAACCAGG
GCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGATGAGAAGGCCGGC
GAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGACCCCCGGCGAGGA
GAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACGCCGACTACCTTG
CCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCCGTCCGTGCTCCC
AACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGCCAAGGAGCTCAA
GCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGGAGGACAAGTCCA
AGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAGGTCGACATGCGC
TTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCGTGGCGGCCGTGG
TGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCAACGGTCCCCGTT
CCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCTGTCGCCGTTGAC
GAGAAGAACTTCCCCAGCCTTGGCGGCAAATAACTTTCCGTGACCGCAAC
GCCGGCAGAAACAACAACCGTGAGAAGCCCACCGATGAGAAGGACGCCCA
ACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGTGAGCGTGTCCGCCACG
ACCGCCAGTCCCGCACCGGCCAGACGCAATGACCCTGAACTCGACCCCAA
CAGAGCCCCCGAGCCCCCTACGAAAGCCGTAGACAGGCCGGCTCCCCGTG
TTGGCAAGCGGGACGCTCCCAAGGAGGCCCCTTCCCAGCCCCGTGAGAAC
AACAACAACTCTCGCCGTGGTGGCCGCGCCACTGGCAACGAGGCCGAACC
TCTACGAGCTTCTTGATGGCGGAGATCCGGTCCAAGCGACACCCGCAAGC
AGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGAAGACCTGGGACGAT
GAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAGACCGAGCCCCAGAC
CCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAAGTCCAAGTCCTACG
CCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACCTGAGCGCCAAGCCC
GTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAGAAGTGGGCCGCCGC
CAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTACATCAAGGGCAAGG
AGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGAAGAACTTCCTTGAG
GTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGTGGCCCTGGTCCCCG
TGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCGTGGCGGCCGTGGCA
ACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTGCTGCTACTCCCGCT
GTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGCGGCAAATAACTTTC
CGTGACCGCAACGCCGGCAGAAACAACAACCGTGAGAAGCCCACCGATGA
GAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGGACCGTGGTGAGC
GTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACGCAATGACCCTGA
ACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAAAGCCGTAGACAGGC
CGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGGAGGCCCCTTCCCAG
CCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGCCGCGCCACTGGCAA
CGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAGATCCGGTCCAAGCG
ACACCCGCAAGCAGGTGAACCAGGGCTGGGGTAACCAGAGCGGCGAGAAG
ACCTGGGACGATGAGAAGGCCGGCGAGAACATTGCTCAGACCGATGAGAC
CGAGCCCCAGACCCCCGGCGAGGAGAAGCCCGAGGAGGCCGCCGACAAGT
CCAAGTCCTACGCCGACTACCTTGCCGAGAAGGCTGCCCAGGGTGACCTG
AGCGCCAAGCCCGTCCGTGCTCCCAACGAGGGCACCAAGCTCGACAAGAA
GTGGGCCGCCGCCAAGGAGCTCAAGCGTTCCGAGGAGGAGGATGCCTACA
TCAAGGGCAAGGAGGACAAGTCCAAGCGCGAGAAGCAGCGCAAGGAGAAG
AACTTCCTTGAGGTCGACATGCGCTTCGTTGAGGCTCCCCGCACTGGTGG
CCCTGGTCCCCGTGGCGGCCGTGGTGGCCGTGGTGCTCGTGGTGCTCGTG
GCGGCCGTGGCAACGGTCCCCGTTCCGAGCGCCCCGCTGCCGCTGCTGCT
GCTACTCCCGCTGTCGCCGTTGACGAGAAGAACTTCCCCAGCCTTGGCGG
CAAATAACTTTCCGTGACCGCAACGCCGGCAGAAACAACAACCGTGAGAA
GCCCACCGATGAGAAGGACGCCCAACGGCGCGGATTCCGCGCCCGTGAGG
ACCGTGGTGAGCGTGTCCGCCACGACCGCCAGTCCCGCACCGGCCAGACG
CAATGACCCTGAACTCGACCCCAACAGAGCCCCCGAGCCCCCTACGAAAG
CCGTAGACAGGCCGGCTCCCCGTGTTGGCAAGCGGGACGCTCCCAAGGAG
GCCCCTTCCCAGCCCCGTGAGAACAACAACAACTCTCGCCGTGGTGGCCG
CGCCACTGGCAACGAGGCCGAACCTCTACGAGCTTCTTGATGGCGGAGAT
CCGGTCCAAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006076-T1.utr3p1 | KJC3_006076-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006076-T1.utr5p1 | KJC3_006076-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019084 |
| DBxref | InterPro:IPR006861 |
| DBxref | PFAM:PF09598 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4601844..4604362 - |
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