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KJC3_006086-T3, KJC3_006086-T3 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006086-T3
Unique NameKJC3_006086-T3
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4636278..4639009-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006086-T3 ID=KJC3_006086-T3|Name=KJC3_006086-T3|organism=Aspergillus niger KJC3|type=mRNA|length=2732bp|location=Sequence derived from alignment at ch4:4636278..4639009- (Aspergillus niger KJC3)
CAGTTATCACTCAGCTTGCGTGAAGGTTTCCGCAACCGTCGCCGTGACTC
GCCGTCGCCGCCGCCAGTCTAGCTAGCTAGCTACTAGCCGGCCGGCCGTT
TCTCCACACTTTTTTCCCTTCCTCGAAACGAACTTAACAATTCCCCGGAT
AGCTAGTTAAGATTTCGGCTGAGCTTGTCGCGAAAGACTTTCTCCTCCCG
CCGGAGCTGGCAGAGAGCTAGGCTCCTTACGTACACTCTTACTTTTGCTC
TTTATTATCTTGTAGTATATTGAGGCCAGCACAGCCGAGTTCTCAATAGA
ACCATGCAAGGTCCAACTGCCTCCACCTCCGGCTCCCACAGCGGCGGCGG
CGGAGGAGTAGGAGAAACCCTCCCCCCGTCGTCCTCGCATTCGCGCCGGC
CGTGGCAGTCGCAATCGCAATCGCAACATCTCCGCCCGACGAGCAGTATC
CGCTCTCAGCACAGTACACACGTCCATCATGACCACAGGTATCAATCATC
CGTTGTTGGTAGCGGTGCCGGTAATGCTGCTCCCTCCGGGAATGAGAAGG
ATGAGAAATGGTACAAAATCCATCTCTTCCGCGGCATGATTCAGGATGTG
AAGCGAAGGGCTCCGTTCTATTGGAGTGATTGGACGGATGCCTGGGATTA
TCGCGTTGTGCCGGCCACGGTGTATATGTATTTTGCTAAGTGGGTTGAAT
CCTGTTTCTTTTCTTTTGGTGTTGGTTGTGTTTATTTGGGATTTGGTTTG
GGAAGGGGGAGAAAGTGTGCTGATTCGGGTTGTGTAGTATCCTCCCTGCG
CTGGCTTTCTCGTTGGATATGTTTGAAAAAACAAACCAGAGTTATGGCGT
TAATGAGGTCTTGCTTGCGAGTGTGCTGGCTGCTGTGGTGTTTTCGGTCT
TTGCGGCGCAGCCGTTGGTTATTGTGGGTGTTACTGGTATGTTTTACTTT
CTCTCCCTCTCTCTATTTCATTTGCTGGTGGAGTGTATGTTGATTGGTTG
GTAAGGTCCTATTACTGTGTTTAATTACACGGTTTATGATATTATCTCGC
CCCGGGGAACGAATTATTTGGCGTTTATGTGCTGGATTGGGATGTGAGTC
TTCTTTCCGCGTTCTCTCTTTGGCAGCTCTCGTACTGATCATTGTAGATG
GTCGTTGATTATGCATTGGCTGCTTGCCATCACCAATGCCTGTAATGGTC
TCACCTATGTCACCCGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCC
TTCATCTACCTCCAAAAGGGTATTCAGGTCCTCACTAGGCAGTGGGGAAC
CGCTGGCGAGACTTCCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGC
TTATGAGTGGTTGGATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAG
CGGTGGGTTCGCAAGTTTCTGGAGGATTATGGCACTCCTTTGACTATTGT
ATTCTTTACCGGGTTCGTCCATATCGGCCATATGAGGGATGTCGAGGTGG
CGAGGCTGCCCACGAGCAAAGCATTTTTCCCGACGGAGGAGCGCCCGTGG
CTGGTTCATTTCTGGGATATCAATGTCGGCGATGTGTTTCTTGCCATTCC
GTTTGCGGTGCTGTTGACTATTTTGTTTTATTTTGACCACAATGGTAAGT
CTACATTCAGGATAAAAACATACTCGGTTGACTGACCATATAGTCTCGTC
TCTTATCGCCCAAGGAACCGAGTTCCCTTTGCGCAAGCCAGCCGGCTTCC
ACTGGGACCTCTGGCTGCTCGGAATCACCACCTTCGTGGCCGGTCTCCTG
GGTATTCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGC
CGCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACCAACAAAG
GCAAAGCCATTCGCGTCACCGACCACGTCGTCGAGCAACGCGTCAGCAAC
TTCGCCCAAGGCCTCATGACCCTGGGCACCATGACCGGCCCTCTGCTTAT
TGTCCTGCACCTAATTCCCCAGGCCGTCCTGGCCGGCCTCTTCTTCATCA
TGGGCGTTCAAGCTCTTCAAGGCAACGGCATCACCCAGAAACTCATCTTC
CTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCAT
CAAACGCCGTCTCTCCATCTGGGTGTTTGTTATCCTGGAGTTGATCGGCT
TCGGTGCCACCTTTGCCATTACCCAGACTATTGCTGCCATCGGCTTCCCG
GTTATTATTCTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTG
GTTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCAT
TCACTATGGAGAGCGTGGGCGGGACCCACGGGCTGAGTGATGCTGCTACT
GCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGG
TGGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGG
CGGTTGAGGATGATTTGGAGAGAGGCGAGGCGTATGAGATGCAGAGGTTG
GGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAATCTCTATACCC
TACTCAAGGAAAAACTGCTGCAGTGCTGGTGATGGGCTAAAAGTATATAA
TGATTTGGTTCCGGAGATACATATAGTGCGCAGATAATAGTAGATGGTTA
GTATATAATTGGAGACGGGATTTCAAGTGCAG
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Coding sequence (CDS) from alignment at ch4:4636278..4639009-

>KJC3_006086-T3 ID=KJC3_006086-T3|Name=KJC3_006086-T3|organism=Aspergillus niger KJC3|type=CDS|length=2760bp|location=Sequence derived from alignment at ch4:4636278..4639009- (Aspergillus niger KJC3)
TCTCGTCTCTTATCGCCCAAGGAACCGAGTTCCCTTTGCGCAAGCCAGCC
GGCTTCCACTGGGACCTCTGGCTGCTCGGAATCACCACCTTCGTGGCCGG
TCTCCTGGGTATTCCCTTCCCCAACGGTCTCATCCCCCAAGCACCGTTCC
ACACAGCCGCTCTCTGCGTCACCCGCGACGTCGCCGACGAAGACGACACC
AACAAAGGCAAAGCCATTCGCGTCACCGACCACGTCGTCGAGCAACGCGT
CAGCAACTTCGCCCAAGGCCTCATGACCCTGGGCACCATGACCGGCCCTC
TGCTTATTGTCCTGCACCTAATTCCCCAGGCCGTCCTGGCCGGCCTCTTC
TTCATCATGGGCGTTCAAGCTCTTCAAGGCAACGGCATCACCCAGAAACT
CATCTTCCTCGCCCAAGACAGCGGCCTCACGCCAGCCTCTAACCCGCTCA
AGCGCATCAAACGCCGTCTCTCCATCTGGGTGTTTGTTATCCTGGAGTTG
ATCGGCTTCGGTGCCACCTTTGCCATTACCCAGACTATTGCTGCCATCGG
CTTCCCGGTTATTATTCTGCTGCTTATCCCCGTCCGCTCGTTCTTGTTTC
CCTGGTGGTTTACGCAGGAGGAACTGTCCGTTCTGGATGCCCCGACTGCT
AGTCCATTCACTATGGAGAGCGTGGGCGGGACCCACGGGCTGAGTGATGC
TGCTACTGCTGCTGCTTCTGGTCGGGATGAGGATCATCGTGATTCGAAGA
ATGGGGGTGGAGGTAATGGGGTTATGATGCGTCGGGATGAGAGCTCGTCC
GAGTCGGCGGTTGAGGATGATTTGGAGAGAGGCGAGGCGTATGAGATGCA
GAGGTTGGGTGTGCGGCGGAGGAGCACGACTGGTGGGGTGGAGTAAATGC
ATTGGCTGCTTGCCATCACCAATGCCTGTAATGGTCTCACCTATGTCACC
CGCTTCTCCTGCGACATCTTTGGTTTCTACGTCGCCTTCATCTACCTCCA
AAAGGGTATTCAGGTCCTCACTAGGCAGTGGGGAACCGCTGGCGAGACTT
CCGCGTATCTCAGTATCATGGTCGCCTTGCTGGTGCTTATGAGTGGTTGG
ATTTGCGGTGAGCTTGGTAACAGCAGTCTCTTCAAGCGGTGGGTTCGCAA
GTTTCTGGAGGATTATGGCACTCCTTTGACTATTGTATTCTTTACCGGGT
TCGTCCATATCGGCCATATGAGGGATGTCGAGGTGGCGAGGCTGCCCACG
AGCAAAGCATTTTTCCCGACGGAGGAGCGCCCGTGGCTGGTTCATTTCTG
GGATATCAATGTCGGCGATGTGTTTCTTGCCATTCCGTTTGCGGTGCTGT
TGACTATTTTGTTTTATTTTGACCACAATGTCTCGTCTCTTATCGCCCAA
GGAACCGAGTTCCCTTTGCGCAAGCCAGCCGGCTTCCACTGGGACCTCTG
GCTGCTCGGAATCACCACCTTCGTGGCCGGTCTCCTGGGTATTCCCTTCC
CCAACGGTCTCATCCCCCAAGCACCGTTCCACACAGCCGCTCTCTGCGTC
ACCCGCGACGTCGCCGACGAAGACGACACCAACAAAGGCAAAGCCATTCG
CGTCACCGACCACGTCGTCGAGCAACGCGTCAGCAACTTCGCCCAAGGCC
TCATGACCCTGGGCACCATGACCGGCCCTCTGCTTATTGTCCTGCACCTA
ATTCCCCAGGCCGTCCTGGCCGGCCTCTTCTTCATCATGGGCGTTCAAGC
TCTTCAAGGCAACGGCATCACCCAGAAACTCATCTTCCTCGCCCAAGACA
GCGGCCTCACGCCAGCCTCTAACCCGCTCAAGCGCATCAAACGCCGTCTC
TCCATCTGGGTGTTTGTTATCCTGGAGTTGATCGGCTTCGGTGCCACCTT
TGCCATTACCCAGACTATTGCTGCCATCGGCTTCCCGGTTATTATTCTGC
TGCTTATCCCCGTCCGCTCGTTCTTGTTTCCCTGGTGGTTTACGCAGGAG
GAACTGTCCGTTCTGGATGCCCCGACTGCTAGTCCATTCACTATGGAGAG
CGTGGGCGGGACCCACGGGCTGAGTGATGCTGCTACTGCTGCTGCTTCTG
GTCGGGATGAGGATCATCGTGATTCGAAGAATGGGGGTGGAGGTAATGGG
GTTATGATGCGTCGGGATGAGAGCTCGTCCGAGTCGGCGGTTGAGGATGA
TTTGGAGAGAGGCGAGGCGTATGAGATGCAGAGGTTGGGTGTGCGGCGGA
GGAGCACGACTGGTGGGGTGGAGTAAATGCATTGGCTGCTTGCCATCACC
AATGCCTGTAATGGTCTCACCTATGTCACCCGCTTCTCCTGCGACATCTT
TGGTTTCTACGTCGCCTTCATCTACCTCCAAAAGGGTATTCAGGTCCTCA
CTAGGCAGTGGGGAACCGCTGGCGAGACTTCCGCGTATCTCAGTATCATG
GTCGCCTTGCTGGTGCTTATGAGTGGTTGGATTTGCGGTGAGCTTGGTAA
CAGCAGTCTCTTCAAGCGGTGGGTTCGCAAGTTTCTGGAGGATTATGGCA
CTCCTTTGACTATTGTATTCTTTACCGGGTTCGTCCATATCGGCCATATG
AGGGATGTCGAGGTGGCGAGGCTGCCCACGAGCAAAGCATTTTTCCCGAC
GGAGGAGCGCCCGTGGCTGGTTCATTTCTGGGATATCAATGTCGGCGATG
TGTTTCTTGCCATTCCGTTTGCGGTGCTGTTGACTATTTTGTTTTATTTT
GACCACAATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0006820anion transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006086KJC3_006086Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006086-T3KJC3_006086-T3-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006086-T3.cdsKJC3_006086-T3.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006086-T3.utr3p1KJC3_006086-T3.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006086-T3.exon4KJC3_006086-T3.exon4Aspergillus niger KJC3exon
KJC3_006086-T3.exon3KJC3_006086-T3.exon3Aspergillus niger KJC3exon
KJC3_006086-T3.exon2KJC3_006086-T3.exon2Aspergillus niger KJC3exon
KJC3_006086-T3.exon1KJC3_006086-T3.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006086-T3.utr5p3KJC3_006086-T3.utr5p3Aspergillus niger KJC3five_prime_UTR
KJC3_006086-T3.utr5p2KJC3_006086-T3.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006086-T3.utr5p1KJC3_006086-T3.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR011531
DBxrefPFAM:PF00955
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4636278..4639009 -
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