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KJC3_006100-T1, KJC3_006100-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006100-T1
Unique NameKJC3_006100-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4673256..4675504-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006100-T1 ID=KJC3_006100-T1|Name=KJC3_006100-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2249bp|location=Sequence derived from alignment at ch4:4673256..4675504- (Aspergillus niger KJC3)
GCTCTCCCTGCCTGGAGTTGATGGTGGTGATGGTGATGATGATGATGACG
ACCATTTCCCACCCCATCGTGTCTGTTTGAGGCCTAGCTTCAGGTTCCCA
TTGATGTTCAGCACCTAACATCGGGCCTAATTATAGTTCCGATCCCGTCC
CAGAACTTATCACGGTTCCTTATTGCTGGTGGACGGACGGACTCCCGGGA
TCATGTTTCCCGATCGGTCTTGGCCATGCATCACTGCCTGGGCTGCATGG
CATATATTGATTCGAGTCCAGCAATGACACGGCATAACGGTCCTAAACGC
AATCCTTGACAGTTAAGGGTCCTATCAGATGAGCTGTCTTATGGCGACAA
CAGGATGATCGTCTTAGGGAGGTGTCTGTTCAAAATTCTATCGCGAAACC
GACTGATGGAGAAAGGCCGGAGTTACCGGCTTCATGCGAGACGCACTAAA
CCTCTTTGAGCGAACCTTGCGAGGAATCATCTCGTCCCCCAACTCTTTTT
TGGGTCTCGCCAGTCTATTAGCCGAATGAAGTGCTTGCTTTTGCAAGGCA
GGCCCTGAGTACCCCCATGAGGTTCAATCAGATTGCTCCCTGCAACGGGT
GTCTCCGCTGTTCCAGGTGGCGCCCAGAGACGGGCAGTCAGGAGGATGGG
GATCACTATTGAACGGACGAGAATAGAGTAATGGGGCAGAGTTTGGAAGA
ATCTCTTATCACAGTTCTTCCTTTTTTTCTTCTTCTTTATAGGCACAGCC
TCTTCCTTCCTGGTGCCCTGTTTTCCCTTTTCTTTTCGCCGATTGGTACC
CCGTGCATATTCATGAGCATATATCTATGTCCAACAGCAAATAGCTCAAC
CCCTCTTTAAGCTCGATTAGCGCTCAGCCTGCCTCTTCGGTGTCATTCGT
TCTCTAATTCCTAATCGTACATTATATCTGCAGCGTGCTTCTCTGCCTCA
AAATCGCCTTCTCTCCTTACTCTATCCACAGACGCACTTGACCTCCTCAT
ATATTCCTCGACATACTGGGTCTCGACCACCCCGGCCTTCCATTTGCGCC
AATATGTCGGGCCTTAATACTACTGCAGAATATGAATTCAAGAAACAATT
GACCTATGGCTGCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCT
ACGTCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTG
TCGATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTG
CTCTGTCTTCGTTCTTGGATGTATCAGTATGTGAACCCCTCCTGCAAGAG
TCCTTTCCAACCATACGCTAACACAACCATTACAGCGGAGGTCCTGGGCT
GGGCAGCACGTACCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTT
CTCATGCAAATCTCTACCTTGATCATCGGTACGCGAGCAGGACCACGCAT
ATCAAATTCATGAAACAGATACTAATTTTCTCTCTTTAGCCCCCACTTTC
TTTACCGCCGGGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGG
GCCCGAGACCTCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCA
CCTGCGATATCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCG
TCGATGGAAGTCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACAC
CATGGTCGCCGGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTT
TCCTCGCCGCTGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAA
ACCATGACCGGCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGT
CCTCTGCATCTACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGG
GGTGGTCTGGCTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGAC
GGCATTATGATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGG
ATGGCTGCTACCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACT
CTCCTGACGGGGTAGCCAGTGGAATGGAGATGCGGTAACTTCGTCGCTTC
TCATTATTCCTACTTTCAAACTCCAGACATTTATACTTCAATCTGACCCC
ATTTCTCCATGAGAAAGCAAGTCCACGTGCCTTGCCTCTGGTCTCTAATA
TGCCAACGCAGCGTTTTTTAAAAGTCGATAGATGGATTGGAGTGTGGCA
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Coding sequence (CDS) from alignment at ch4:4673256..4675504-

>KJC3_006100-T1 ID=KJC3_006100-T1|Name=KJC3_006100-T1|organism=Aspergillus niger KJC3|type=CDS|length=2745bp|location=Sequence derived from alignment at ch4:4673256..4675504- (Aspergillus niger KJC3)
CCCCCACTTTCTTTACCGCCGGGATCTACGTGCTCCTGGGCCGTTTCATC
CACCTGTTGGGGCCCGAGACCTCAATTTTGAGTCCGAAACTCTATCTCTG
GATTTTCGTCACCTGCGATATCATCTCATTGGTTGTCCAGGCTGTGGGTG
GTGGCATGGCGTCGATGGAAGTCAACAAGGTCAACGGCGATACTGCTCCA
GGCACGCACACCATGGTCGCCGGTATCGTGTTCCAGCTGGCGTCTATCAC
GGTCTTTGTTTTCCTCGCCGCTGATTTCGTCCGTCGCACTCTCCGTATGC
GGATCTTGCAAACCATGACCGGCACGATCATCCCTCTTCTCGGTGCGATG
ATCTTCTCTGTCCTCTGCATCTACATCCGGAGTATCTATCGAACCATTGA
GCTGTCGCAGGGGTGGTCTGGCTACTTGATCACGCACGAACGGTACTTCA
TTGTCCTGGACGGCATTATGATGGTCTTAGCTGTGGGTGTGTTTAACATC
TTCCATCCAGGATGGCTGCTACCTAAGAATGAGGTCAAGCCATTCCACCG
CGAGATCTACTCTCCTGACGGGGTAGCCAGTGGAATGGAGATGCGGTAAC
GGAGGTCCTGGGCTGGGCAGCACGTACCTGGTCTGCTGAATGTCCATACA
ATGGAACCGCCTTTCTCATGCAAATCTCTACCTTGATCATCGATGTCGGG
CCTTAATACTACTGCAGAATATGAATTCAAGAAACAATTGACCTATGGCT
GCCATGCAAAGATCGATGGCTACGGCACCTCATATGGCTACGTCCCCTCG
CTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGGTCTGTCGATGTTGCT
CCATACATTGCAGCTGGTGTGGAAGAGGACCTGGTGGTGCTCTGTCTTCG
TTCTTGGATGTATCACCCCCACTTTCTTTACCGCCGGGATCTACGTGCTC
CTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGACCTCAATTTTGAGTCC
GAAACTCTATCTCTGGATTTTCGTCACCTGCGATATCATCTCATTGGTTG
TCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAAGTCAACAAGGTCAAC
GGCGATACTGCTCCAGGCACGCACACCATGGTCGCCGGTATCGTGTTCCA
GCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCGCTGATTTCGTCCGTC
GCACTCTCCGTATGCGGATCTTGCAAACCATGACCGGCACGATCATCCCT
CTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCATCTACATCCGGAGTAT
CTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTGGCTACTTGATCACGC
ACGAACGGTACTTCATTGTCCTGGACGGCATTATGATGGTCTTAGCTGTG
GGTGTGTTTAACATCTTCCATCCAGGATGGCTGCTACCTAAGAATGAGGT
CAAGCCATTCCACCGCGAGATCTACTCTCCTGACGGGGTAGCCAGTGGAA
TGGAGATGCGGTAACGGAGGTCCTGGGCTGGGCAGCACGTACCTGGTCTG
CTGAATGTCCATACAATGGAACCGCCTTTCTCATGCAAATCTCTACCTTG
ATCATCGATGTCGGGCCTTAATACTACTGCAGAATATGAATTCAAGAAAC
AATTGACCTATGGCTGCCATGCAAAGATCGATGGCTACGGCACCTCATAT
GGCTACGTCCCCTCGCTGGCTGCGGGCATTGTATTTTGTGTCCTCTTCGG
TCTGTCGATGTTGCTCCATACATTGCAGCTGGTGTGGAAGAGGACCTGGT
GGTGCTCTGTCTTCGTTCTTGGATGTATCACCCCCACTTTCTTTACCGCC
GGGATCTACGTGCTCCTGGGCCGTTTCATCCACCTGTTGGGGCCCGAGAC
CTCAATTTTGAGTCCGAAACTCTATCTCTGGATTTTCGTCACCTGCGATA
TCATCTCATTGGTTGTCCAGGCTGTGGGTGGTGGCATGGCGTCGATGGAA
GTCAACAAGGTCAACGGCGATACTGCTCCAGGCACGCACACCATGGTCGC
CGGTATCGTGTTCCAGCTGGCGTCTATCACGGTCTTTGTTTTCCTCGCCG
CTGATTTCGTCCGTCGCACTCTCCGTATGCGGATCTTGCAAACCATGACC
GGCACGATCATCCCTCTTCTCGGTGCGATGATCTTCTCTGTCCTCTGCAT
CTACATCCGGAGTATCTATCGAACCATTGAGCTGTCGCAGGGGTGGTCTG
GCTACTTGATCACGCACGAACGGTACTTCATTGTCCTGGACGGCATTATG
ATGGTCTTAGCTGTGGGTGTGTTTAACATCTTCCATCCAGGATGGCTGCT
ACCTAAGAATGAGGTCAAGCCATTCCACCGCGAGATCTACTCTCCTGACG
GGGTAGCCAGTGGAATGGAGATGCGGTAACGGAGGTCCTGGGCTGGGCAG
CACGTACCTGGTCTGCTGAATGTCCATACAATGGAACCGCCTTTCTCATG
CAAATCTCTACCTTGATCATCGATGTCGGGCCTTAATACTACTGCAGAAT
ATGAATTCAAGAAACAATTGACCTATGGCTGCCATGCAAAGATCGATGGC
TACGGCACCTCATATGGCTACGTCCCCTCGCTGGCTGCGGGCATTGTATT
TTGTGTCCTCTTCGGTCTGTCGATGTTGCTCCATACATTGCAGCTGGTGT
GGAAGAGGACCTGGTGGTGCTCTGTCTTCGTTCTTGGATGTATCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006100KJC3_006100Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006100-T1KJC3_006100-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006100-T1.cdsKJC3_006100-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006100-T1.utr3p1KJC3_006100-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006100-T1.exon4KJC3_006100-T1.exon4Aspergillus niger KJC3exon
KJC3_006100-T1.exon3KJC3_006100-T1.exon3Aspergillus niger KJC3exon
KJC3_006100-T1.exon2KJC3_006100-T1.exon2Aspergillus niger KJC3exon
KJC3_006100-T1.exon1KJC3_006100-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006100-T1.utr5p2KJC3_006100-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006100-T1.utr5p1KJC3_006100-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR007568
DBxrefPFAM:PF04479
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4673256..4675504 -
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