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KJC3_006107-T1, KJC3_006107-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006107-T1
Unique NameKJC3_006107-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4701266..4702462-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006107-T1 ID=KJC3_006107-T1|Name=KJC3_006107-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1197bp|location=Sequence derived from alignment at ch4:4701266..4702462- (Aspergillus niger KJC3)
CGCTCTCCGCCGCCACTTCACCCTCATCCATCACCACCATCTTCCCCAGG
AGCTCCTGATTCCTTCTGTCCTTTCCAGTCCACGCTGTCAATTCATCCCA
GCAAACTACAGCAAGACTGTACCCATATATCTCGCTAGGAACACCACACC
CATCCCCTCCTAGCCACCCACCGCATCTCTCTGCCTTACCACCTCCGTCA
TCTCCTTTCCCCGCGGACACCTGGTAATGACGCTGCCTACCTCCTAGCTC
TAGCACCAAACAACCACAACCACTAACCAGGGATATTCACTACCAGATCC
AGATTTCCTCAATTGACAACACAACAAACCCTTCCACAACCCAACTCAAT
TTATACACCCACCCCTAAACTTCCAGCACAGCAACAGCAACAATGGCCCA
ACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGAGTCCTCGA
TCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAGCCCCGACG
ACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAGCTCCTCCG
CAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGACGGCGCCGC
TGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTGTCGTGGAG
GTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTGGAGGCTGT
GTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGATGAAGTATT
TGTATGGCTCCCTCTTCTTTGCTAGATGATGAGAAGTGGTTGTTTTGGTG
GTTGTGGATGTGCATGCTAATGACCTTTGTTGTATAGGTACAAGGGCATG
GCGGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTCGCATGTCGCCGCA
GAGCACGGGATTTTCGCAGATTCAGGCCCGCAATCTGGGTGAGGGAGGTG
GCGGACAGCAGATGAGTGTGTTGTTGAACTGGCATGAGAAGTTGGTGGAG
GTTGCGGGGACGGGGTCCATTGTTAGGGTCATGACGGATCGGAGGACTGT
TTAAATCTTTTGATTCTCTGTTGTTGTGGTTTGGTTCGTTGTATGTTGAA
GATGGAAGTGCGTTTTGTGTACTCATGTTCTTCGTCAGGATGATATCCTA
GATGTCCCTTTTATTTTCCCTTTTCTCGTCAATATTATACAAGCACC
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Coding sequence (CDS) from alignment at ch4:4701266..4702462-

>KJC3_006107-T1 ID=KJC3_006107-T1|Name=KJC3_006107-T1|organism=Aspergillus niger KJC3|type=CDS|length=1152bp|location=Sequence derived from alignment at ch4:4701266..4702462- (Aspergillus niger KJC3)
GTACAAGGGCATGGCGGCGCCGACTCCTAGTAACGCGGCACAGTCGCCTC
GCATGTCGCCGCAGAGCACGGGATTTTCGCAGATTCAGGCCCGCAATCTG
GGTGAGGGAGGTGGCGGACAGCAGATGAGTGTGTTGTTGAACTGGCATGA
GAAGTTGGTGGAGGTTGCGGGGACGGGGTCCATTGTTAGGGTCATGACGG
ATCGGAGGACTGTTTAAATGGCCCAACTCAACTACCGCACAATCAACATC
GATGTCCTGGACCCCGAGTCCTCGATCAACTTCCCCATGGACACTCTCCT
GCCGCCTACCCTCCCAGCCCCGACGACCTCCGGCGCTGCGGCCTCCGTCG
TTAACCAGGTGCGCCAGCTCCTCCGCAGCGGCGACAACGAGGGAGCTCTG
CGGTACGTGCTCGAGACGGCGCCGCTGGGCGGCGATGACCGCGCGAAGGA
GGTGCATCTGGCAGCTGTCGTGGAGGTCTTGCAGGGTATTCGTCAAGGGG
AGATGAGTCGCGTGTTGGAGGCTGTGTGTACCGGTGAGGGTGGGTCGGAG
AGAGCGGATTGTTTGATGAAGTATTTGTACAAGGGCATGGCGGCGCCGAC
TCCTAGTAACGCGGCACAGTCGCCTCGCATGTCGCCGCAGAGCACGGGAT
TTTCGCAGATTCAGGCCCGCAATCTGGGTGAGGGAGGTGGCGGACAGCAG
ATGAGTGTGTTGTTGAACTGGCATGAGAAGTTGGTGGAGGTTGCGGGGAC
GGGGTCCATTGTTAGGGTCATGACGGATCGGAGGACTGTTTAAATGGCCC
AACTCAACTACCGCACAATCAACATCGATGTCCTGGACCCCGAGTCCTCG
ATCAACTTCCCCATGGACACTCTCCTGCCGCCTACCCTCCCAGCCCCGAC
GACCTCCGGCGCTGCGGCCTCCGTCGTTAACCAGGTGCGCCAGCTCCTCC
GCAGCGGCGACAACGAGGGAGCTCTGCGGTACGTGCTCGAGACGGCGCCG
CTGGGCGGCGATGACCGCGCGAAGGAGGTGCATCTGGCAGCTGTCGTGGA
GGTCTTGCAGGGTATTCGTCAAGGGGAGATGAGTCGCGTGTTGGAGGCTG
TGTGTACCGGTGAGGGTGGGTCGGAGAGAGCGGATTGTTTGATGAAGTAT
TT
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0015629actin cytoskeleton
GO:0005885Arp2/3 protein complex
Vocabulary: Biological Process
TermDefinition
GO:0030833regulation of actin filament polymerization
GO:0034314Arp2/3 complex-mediated actin nucleation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006107KJC3_006107Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006107-T1KJC3_006107-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006107-T1.cdsKJC3_006107-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006107-T1.utr3p1KJC3_006107-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006107-T1.exon3KJC3_006107-T1.exon3Aspergillus niger KJC3exon
KJC3_006107-T1.exon2KJC3_006107-T1.exon2Aspergillus niger KJC3exon
KJC3_006107-T1.exon1KJC3_006107-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006107-T1.utr5p2KJC3_006107-T1.utr5p2Aspergillus niger KJC3five_prime_UTR
KJC3_006107-T1.utr5p1KJC3_006107-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
NoteBUSCO:EOG09264V51
DBxrefInterPro:IPR036743
DBxrefInterPro:IPR006789
DBxrefPFAM:PF04699
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4701266..4702462 -
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