|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4735300..4738209- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006116-T1 ID=KJC3_006116-T1|Name=KJC3_006116-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2910bp|location=Sequence derived from alignment at ch4:4735300..4738209- (Aspergillus niger KJC3)
ATGTCGAGTCAAACAGCCCCAGTCATCCCTCCCCGACCGTCAAGATCCCC
TCAACAAGGCCTTGCACCTCCCTCAGCAGACATGCCCAGGATCCCTCCTC
GTCCTACTCACCGCATTGAGCGCTCTGTGTCTCCCTACCGCGATAGCTAT
GCACCATCTCCCTTGAATGACCTGCCCAATGGTTCGGGTATGAAGCGTAC
CCCCTCGACCGATCTGCCTCCTCGCCCCCCAAGTGTCACAATTCCCTCTT
TGGGTGAAGAGGGTATCGAGTACGAAGATTTGGATGTTGGCAACGTCTCC
GACACCCACCAGTCGACCCCCGCGGAAACACGCAACGTGGGAAGCGATCT
CAAGCTCCATGCGCCAAGGCCATCTTTACCCTCCTCCAGTGCCAAGGCCA
AGGTGCAGGCTGTCACACGTACAGATTCCCGTCAAGCTGCTGCAGCCGGT
CTGGGCCGTGCCGGGTCTCCTCTTCATGATGATCATGCCGAGAGGCCCAC
TCGCTCATCGCATTCGCGGGCTAGTGGCTCACGCGCTGAATCTTCCACCG
CGTCCGCAGATCGCCGACAGTCACTCCACGGTGACGAACACGGGATCCCG
GAGATTGGGCAGAGAGTTCCCATGTACCCCAACGCGGGCGATGTCCAGGC
TCCGTCACCAAGTCCATACGTCGTGGAGCACCAGCAGCAACGTCCAGGTC
GGAGTCACAACAGAAGCCGTAGTGGTCGTGAGGCCTCTCTGCCACCCGGA
AGTTATGGCCTGCATGGGCACGGTGTACCCGCGAACGACAAGTTCGAAAA
GGCGTGGTACGAGAAGCACCCTGAAGAATATGTCAAGGAAGAACAAGGCC
AATATGGCCCCGGTGTTGGCACGCCTAGACCAGATTGGGCTTTGAGCAGT
GACGACCTGAACAAGATTGTTCGAGGTTCTGCCGTCACTGGCTCTGGACT
CGGTACGTTATCCAATAATACACATTTATAGACAGAACGATAGTGCTGAT
GATGATATCCAGGCACCTCGCCTGCTGTGGTGGGAACTCCAGAAGAGGAA
GTCGGTTATATTGCCTCTGACGAGTATACGCATCGCCTGTCATCGCCGCC
TCCCGAGTCGCGCCGCGATTCTCGTCCGGCGTTTGAGTCCCCGCTCCGCA
AGTCAAGCTTACCAGCCACAGAGTCTCAGGCACAACGGGAAGATGTGGTG
GAGAAGGATGCAGGCGAGAAGTCAGAAGCACCTCGAGTGATCCATGTTGA
CGAGCCGTATCACCACTTGCACCACCCCGATGGCTTTGCTCAAATTCCGG
ACCCGGAAGAGCTCAACCGCGGCGTCACTGATGGCAATGAAGACGACGAG
CCCATATTGGCTGCTGACGAAGTGCGTCCCGAGTCGGCCTACCAGCATCC
CGCTGTCTCGCCTTCGTTCGAAAGGAGTGGTAGTGTCGATTATGAAAGCA
GAAGTCACACACCTAGTGTCACGCACAGCAGGTCTAACAGCCGGGCTGCT
AGTGTACAGAATAGCATGCCTGCTTTGACACGATATGACTCGCGCGAAGA
GCACGGAGGCGTCTACACCCCTCTTGAAGATGTTGAAGAATATGAGCCCC
TGTTCCCTGAGGATGATGCGAAGGACAAGAAGACTGTCTCAACTGCAGAG
CGCTTTAAGCAGCGTCCGGAGCTCAAGCACCGGTTCCCTAGCCAGGATAT
CTGGGAAGATTCGCCTAACAGTCTGCAGCTGCACGCCACGGTGTCTACCC
CAGAGGGCCCCAAGCAGGAGGCGTTTGAGACTCCTGAACAAGAGTCGTTC
CGTAGGAGCCACGCGAGTCATTTGGATCCCCATCAGGTCGCGACGCAGAT
CTTGGAATCCGAAGAGCATGACGAGAAGCCTCCAGCTCGACCGGAAGTGG
CCAAGCAAAGATTTCCCAGCCGTGACATCTGGGAGGATGCGCCTGAAAGC
CATACACTAGTGACGACCATAGAGCCGTCAGAGGAAGAGGTCAAGAGCCC
AGAAGTTCCCTCCAAGCCAAGCATTCCACTACGCCCTCAGAAACGTCCGC
AGCAAGCCCCAGCAGTGGATGCGTCAACGAAGCCGGTCACTTCCCCTACT
GAAAAGCGTCAACCACCAGTCATCCCGGATAGACCCAAGCCTCAAATTCC
AGCCCGTCCAGCCAAGCCTATCTCTCGTGCAAGTCCCGAAGAGTCAAAGG
ATGCAGCCCCCAAACCCAAACCGGCCGTGCCAGCGCGTCCTGGCGGTAGC
AAGATTGCTGCTTTGAAGGCAGGATTCCTGTCGGATCTGAACTCACGGCT
GCAGCTTGGCCCGCAGGCCCCTCCCAAGCCTCAGGAGAAAAAGAAAGAGG
AAGAGGCCGCCCCAGTAGAGAAGCAACCTTTGAGTGATGCTCGGAAGGGT
CGTGCTCGTGGACCTGCGCGGAGAAAGCCTGCCGTTGAGAAAGCCAGCAC
GAGGTTACCCACCATTCCTGAGGTCAAGATCACCACAACGTGGAATGTCT
GGCAAGTTGGTGAAGATGGTAACTTGGTCGTTGGATCTGAAGCCAACCCT
GCTGCTCCTGATACCAAGCCCGATACCATGGCCCCAGCGATTGCAAAGAA
CACCGCCGGTGAATCTGTTGATCCGCAGCCATTACCGGCGAAGGAAGACC
AAGCCCCAGCTTCACCAGAGAACACGACAGTCACCGAGTCCAAGGAACCT
ACATTCACCGAGGCTGCCCACTCAATCCCAACAACCACTGACAGTGCGGC
TGAACCAAGCCCCGCTGTAGAACCCGTGGTCAAGGAGGATGTTCCCATTG
CTAAAGAAACCTCATCCCCTGAGGAAGACGTCGAAAATGTCGCCGAAACC
CTAGCCGCCTCTGCGGACGGCAAACGGCCTTCGGAAGGTGACATTGGCGA
GATCCAGTGA back to topCoding sequence (CDS) from alignment at ch4:4735300..4738209- >KJC3_006116-T1 ID=KJC3_006116-T1|Name=KJC3_006116-T1|organism=Aspergillus niger KJC3|type=CDS|length=5700bp|location=Sequence derived from alignment at ch4:4735300..4738209- (Aspergillus niger KJC3)
GCACCTCGCCTGCTGTGGTGGGAACTCCAGAAGAGGAAGTCGGTTATATT
GCCTCTGACGAGTATACGCATCGCCTGTCATCGCCGCCTCCCGAGTCGCG
CCGCGATTCTCGTCCGGCGTTTGAGTCCCCGCTCCGCAAGTCAAGCTTAC
CAGCCACAGAGTCTCAGGCACAACGGGAAGATGTGGTGGAGAAGGATGCA
GGCGAGAAGTCAGAAGCACCTCGAGTGATCCATGTTGACGAGCCGTATCA
CCACTTGCACCACCCCGATGGCTTTGCTCAAATTCCGGACCCGGAAGAGC
TCAACCGCGGCGTCACTGATGGCAATGAAGACGACGAGCCCATATTGGCT
GCTGACGAAGTGCGTCCCGAGTCGGCCTACCAGCATCCCGCTGTCTCGCC
TTCGTTCGAAAGGAGTGGTAGTGTCGATTATGAAAGCAGAAGTCACACAC
CTAGTGTCACGCACAGCAGGTCTAACAGCCGGGCTGCTAGTGTACAGAAT
AGCATGCCTGCTTTGACACGATATGACTCGCGCGAAGAGCACGGAGGCGT
CTACACCCCTCTTGAAGATGTTGAAGAATATGAGCCCCTGTTCCCTGAGG
ATGATGCGAAGGACAAGAAGACTGTCTCAACTGCAGAGCGCTTTAAGCAG
CGTCCGGAGCTCAAGCACCGGTTCCCTAGCCAGGATATCTGGGAAGATTC
GCCTAACAGTCTGCAGCTGCACGCCACGGTGTCTACCCCAGAGGGCCCCA
AGCAGGAGGCGTTTGAGACTCCTGAACAAGAGTCGTTCCGTAGGAGCCAC
GCGAGTCATTTGGATCCCCATCAGGTCGCGACGCAGATCTTGGAATCCGA
AGAGCATGACGAGAAGCCTCCAGCTCGACCGGAAGTGGCCAAGCAAAGAT
TTCCCAGCCGTGACATCTGGGAGGATGCGCCTGAAAGCCATACACTAGTG
ACGACCATAGAGCCGTCAGAGGAAGAGGTCAAGAGCCCAGAAGTTCCCTC
CAAGCCAAGCATTCCACTACGCCCTCAGAAACGTCCGCAGCAAGCCCCAG
CAGTGGATGCGTCAACGAAGCCGGTCACTTCCCCTACTGAAAAGCGTCAA
CCACCAGTCATCCCGGATAGACCCAAGCCTCAAATTCCAGCCCGTCCAGC
CAAGCCTATCTCTCGTGCAAGTCCCGAAGAGTCAAAGGATGCAGCCCCCA
AACCCAAACCGGCCGTGCCAGCGCGTCCTGGCGGTAGCAAGATTGCTGCT
TTGAAGGCAGGATTCCTGTCGGATCTGAACTCACGGCTGCAGCTTGGCCC
GCAGGCCCCTCCCAAGCCTCAGGAGAAAAAGAAAGAGGAAGAGGCCGCCC
CAGTAGAGAAGCAACCTTTGAGTGATGCTCGGAAGGGTCGTGCTCGTGGA
CCTGCGCGGAGAAAGCCTGCCGTTGAGAAAGCCAGCACGAGGTTACCCAC
CATTCCTGAGGTCAAGATCACCACAACGTGGAATGTCTGGCAAGTTGGTG
AAGATGGTAACTTGGTCGTTGGATCTGAAGCCAACCCTGCTGCTCCTGAT
ACCAAGCCCGATACCATGGCCCCAGCGATTGCAAAGAACACCGCCGGTGA
ATCTGTTGATCCGCAGCCATTACCGGCGAAGGAAGACCAAGCCCCAGCTT
CACCAGAGAACACGACAGTCACCGAGTCCAAGGAACCTACATTCACCGAG
GCTGCCCACTCAATCCCAACAACCACTGACAGTGCGGCTGAACCAAGCCC
CGCTGTAGAACCCGTGGTCAAGGAGGATGTTCCCATTGCTAAAGAAACCT
CATCCCCTGAGGAAGACGTCGAAAATGTCGCCGAAACCCTAGCCGCCTCT
GCGGACGGCAAACGGCCTTCGGAAGGTGACATTGGCGAGATCCAGTGAAT
GTCGAGTCAAACAGCCCCAGTCATCCCTCCCCGACCGTCAAGATCCCCTC
AACAAGGCCTTGCACCTCCCTCAGCAGACATGCCCAGGATCCCTCCTCGT
CCTACTCACCGCATTGAGCGCTCTGTGTCTCCCTACCGCGATAGCTATGC
ACCATCTCCCTTGAATGACCTGCCCAATGGTTCGGGTATGAAGCGTACCC
CCTCGACCGATCTGCCTCCTCGCCCCCCAAGTGTCACAATTCCCTCTTTG
GGTGAAGAGGGTATCGAGTACGAAGATTTGGATGTTGGCAACGTCTCCGA
CACCCACCAGTCGACCCCCGCGGAAACACGCAACGTGGGAAGCGATCTCA
AGCTCCATGCGCCAAGGCCATCTTTACCCTCCTCCAGTGCCAAGGCCAAG
GTGCAGGCTGTCACACGTACAGATTCCCGTCAAGCTGCTGCAGCCGGTCT
GGGCCGTGCCGGGTCTCCTCTTCATGATGATCATGCCGAGAGGCCCACTC
GCTCATCGCATTCGCGGGCTAGTGGCTCACGCGCTGAATCTTCCACCGCG
TCCGCAGATCGCCGACAGTCACTCCACGGTGACGAACACGGGATCCCGGA
GATTGGGCAGAGAGTTCCCATGTACCCCAACGCGGGCGATGTCCAGGCTC
CGTCACCAAGTCCATACGTCGTGGAGCACCAGCAGCAACGTCCAGGTCGG
AGTCACAACAGAAGCCGTAGTGGTCGTGAGGCCTCTCTGCCACCCGGAAG
TTATGGCCTGCATGGGCACGGTGTACCCGCGAACGACAAGTTCGAAAAGG
CGTGGTACGAGAAGCACCCTGAAGAATATGTCAAGGAAGAACAAGGCCAA
TATGGCCCCGGTGTTGGCACGCCTAGACCAGATTGGGCTTTGAGCAGTGA
CGACCTGAACAAGATTGTTCGAGGTTCTGCCGTCACTGGCTCTGGACTCG
GCACCTCGCCTGCTGTGGTGGGAACTCCAGAAGAGGAAGTCGGTTATATT
GCCTCTGACGAGTATACGCATCGCCTGTCATCGCCGCCTCCCGAGTCGCG
CCGCGATTCTCGTCCGGCGTTTGAGTCCCCGCTCCGCAAGTCAAGCTTAC
CAGCCACAGAGTCTCAGGCACAACGGGAAGATGTGGTGGAGAAGGATGCA
GGCGAGAAGTCAGAAGCACCTCGAGTGATCCATGTTGACGAGCCGTATCA
CCACTTGCACCACCCCGATGGCTTTGCTCAAATTCCGGACCCGGAAGAGC
TCAACCGCGGCGTCACTGATGGCAATGAAGACGACGAGCCCATATTGGCT
GCTGACGAAGTGCGTCCCGAGTCGGCCTACCAGCATCCCGCTGTCTCGCC
TTCGTTCGAAAGGAGTGGTAGTGTCGATTATGAAAGCAGAAGTCACACAC
CTAGTGTCACGCACAGCAGGTCTAACAGCCGGGCTGCTAGTGTACAGAAT
AGCATGCCTGCTTTGACACGATATGACTCGCGCGAAGAGCACGGAGGCGT
CTACACCCCTCTTGAAGATGTTGAAGAATATGAGCCCCTGTTCCCTGAGG
ATGATGCGAAGGACAAGAAGACTGTCTCAACTGCAGAGCGCTTTAAGCAG
CGTCCGGAGCTCAAGCACCGGTTCCCTAGCCAGGATATCTGGGAAGATTC
GCCTAACAGTCTGCAGCTGCACGCCACGGTGTCTACCCCAGAGGGCCCCA
AGCAGGAGGCGTTTGAGACTCCTGAACAAGAGTCGTTCCGTAGGAGCCAC
GCGAGTCATTTGGATCCCCATCAGGTCGCGACGCAGATCTTGGAATCCGA
AGAGCATGACGAGAAGCCTCCAGCTCGACCGGAAGTGGCCAAGCAAAGAT
TTCCCAGCCGTGACATCTGGGAGGATGCGCCTGAAAGCCATACACTAGTG
ACGACCATAGAGCCGTCAGAGGAAGAGGTCAAGAGCCCAGAAGTTCCCTC
CAAGCCAAGCATTCCACTACGCCCTCAGAAACGTCCGCAGCAAGCCCCAG
CAGTGGATGCGTCAACGAAGCCGGTCACTTCCCCTACTGAAAAGCGTCAA
CCACCAGTCATCCCGGATAGACCCAAGCCTCAAATTCCAGCCCGTCCAGC
CAAGCCTATCTCTCGTGCAAGTCCCGAAGAGTCAAAGGATGCAGCCCCCA
AACCCAAACCGGCCGTGCCAGCGCGTCCTGGCGGTAGCAAGATTGCTGCT
TTGAAGGCAGGATTCCTGTCGGATCTGAACTCACGGCTGCAGCTTGGCCC
GCAGGCCCCTCCCAAGCCTCAGGAGAAAAAGAAAGAGGAAGAGGCCGCCC
CAGTAGAGAAGCAACCTTTGAGTGATGCTCGGAAGGGTCGTGCTCGTGGA
CCTGCGCGGAGAAAGCCTGCCGTTGAGAAAGCCAGCACGAGGTTACCCAC
CATTCCTGAGGTCAAGATCACCACAACGTGGAATGTCTGGCAAGTTGGTG
AAGATGGTAACTTGGTCGTTGGATCTGAAGCCAACCCTGCTGCTCCTGAT
ACCAAGCCCGATACCATGGCCCCAGCGATTGCAAAGAACACCGCCGGTGA
ATCTGTTGATCCGCAGCCATTACCGGCGAAGGAAGACCAAGCCCCAGCTT
CACCAGAGAACACGACAGTCACCGAGTCCAAGGAACCTACATTCACCGAG
GCTGCCCACTCAATCCCAACAACCACTGACAGTGCGGCTGAACCAAGCCC
CGCTGTAGAACCCGTGGTCAAGGAGGATGTTCCCATTGCTAAAGAAACCT
CATCCCCTGAGGAAGACGTCGAAAATGTCGCCGAAACCCTAGCCGCCTCT
GCGGACGGCAAACGGCCTTCGGAAGGTGACATTGGCGAGATCCAGTGAAT
GTCGAGTCAAACAGCCCCAGTCATCCCTCCCCGACCGTCAAGATCCCCTC
AACAAGGCCTTGCACCTCCCTCAGCAGACATGCCCAGGATCCCTCCTCGT
CCTACTCACCGCATTGAGCGCTCTGTGTCTCCCTACCGCGATAGCTATGC
ACCATCTCCCTTGAATGACCTGCCCAATGGTTCGGGTATGAAGCGTACCC
CCTCGACCGATCTGCCTCCTCGCCCCCCAAGTGTCACAATTCCCTCTTTG
GGTGAAGAGGGTATCGAGTACGAAGATTTGGATGTTGGCAACGTCTCCGA
CACCCACCAGTCGACCCCCGCGGAAACACGCAACGTGGGAAGCGATCTCA
AGCTCCATGCGCCAAGGCCATCTTTACCCTCCTCCAGTGCCAAGGCCAAG
GTGCAGGCTGTCACACGTACAGATTCCCGTCAAGCTGCTGCAGCCGGTCT
GGGCCGTGCCGGGTCTCCTCTTCATGATGATCATGCCGAGAGGCCCACTC
GCTCATCGCATTCGCGGGCTAGTGGCTCACGCGCTGAATCTTCCACCGCG
TCCGCAGATCGCCGACAGTCACTCCACGGTGACGAACACGGGATCCCGGA
GATTGGGCAGAGAGTTCCCATGTACCCCAACGCGGGCGATGTCCAGGCTC
CGTCACCAAGTCCATACGTCGTGGAGCACCAGCAGCAACGTCCAGGTCGG
AGTCACAACAGAAGCCGTAGTGGTCGTGAGGCCTCTCTGCCACCCGGAAG
TTATGGCCTGCATGGGCACGGTGTACCCGCGAACGACAAGTTCGAAAAGG
CGTGGTACGAGAAGCACCCTGAAGAATATGTCAAGGAAGAACAAGGCCAA
TATGGCCCCGGTGTTGGCACGCCTAGACCAGATTGGGCTTTGAGCAGTGA
CGACCTGAACAAGATTGTTCGAGGTTCTGCCGTCACTGGCTCTGGACTCG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR021582 |
| DBxref | PFAM:PF11489 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4735300..4738209 - |
|
