You are here

Home

KJC3_006122-T1, KJC3_006122-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006122-T1
Unique NameKJC3_006122-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4754450..4756870+

Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006122-T1 ID=KJC3_006122-T1|Name=KJC3_006122-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2421bp|location=Sequence derived from alignment at ch4:4754450..4756870+ (Aspergillus niger KJC3)
GGCAGACAGTCGGACTCAGTGGCTTTGTCTGCTAGCTTGTTTATTGGCTC
AATTGAGCGTGTCGCGCAGCCTAGTTTCTCAACAAACAAGACTGAACGAG
GACTAATCCAACCAGCAATCATGGGCTTCACCAAGGAATCAGCCACGATC
GGCATCATTGGCATGGGAGACATGGGCAAGATGTACGCCCAGCGTCTGAG
CGCTGCCGGATGGAGGTAATATTTAAACAAGTGTCCTTTCCAGTCAGTTG
TTTCCGATTGTCTCAATCACCCTGGTGGTGTACCATTTGTAATAGGTGAG
CTTCCCCTTCTGTTATTATCTCTCGCTTTTCCCGTTGCTTCTCTCCCCCT
CTTTGGATGATGACTTGAGTGCATTTGGCTCGAGTATGGCCTGGTGGTAA
GCTTTCCTACCTTGGTAGGTTTGCGACTCTGCTAGACCGTCAATGATGTA
ACATCTCAGCTACCTATATTTCTTTGTCTGAAACCCAAAGCTATCAACAT
ATGTTTATGATGATTTCTTCACACACTTGTGCATTATGGCCTCGTGCTAA
CCATTCTGCCAAACTAGGTTTTCGCGTTGTATATTCTTAGAGAAAAGCAG
AAACCGGACTGAATTAGCTATACTAACTATTTACTCTTTTTTATCTATCA
AGGATTAATGCATGTGACAAACCCGACTCGTATGAGCGTCTTATAAAGGA
ATTCGAATCTACAGTACGTCCATGATACTTCGCAGCTCGCGCTGTCCAGA
CATAAACTCATCCAATAAAACCAAAAAGCAAAATGTCACTATCTTTCCCA
ATGGCCACCTGGTTTCCAGAATAAGCGATTACATTATTTACAGTGTAGAG
GCCGGTGTCATCGACAAGGTAGTGGAAATGTATGGCCCGTGTATGTATTT
CAGTGCAAAGGCTTGCTTGCTGCGCCCTTATTTGTGCATCATGAGAGAAT
ATGCCTGTCTGACTTGTGGAATATCACAAAAGCTACCAAGGTCGGCGCAA
TTGTCGGTGGTCAAACGTCCTGCAAGGCTCCTGAGCTCGCGGCTTTCGAC
AAACACCTTCCCAAGGACGTAGAGATCGTATCATGCCATTCGCTACATGG
CCCTCAAGTCAACCCTAAGGGTCAACCTCTGGTACGCTGCTGTCTGCCTG
CGCCTGCCTCTTTCTGGTTTGGCTTGAGCCTATTGTCGTTCAAGCCAAGA
TCATGCACAGTACAAAGTATAATAACATTTACGCCCATTTTTGCTTTGTC
TAGGTCTTGATCCAGCACCGTGCCTCCGACGAAAGCCTCAACTTCGTCAG
GGAAGTCCTGTCATGCTTCGAATCCACGTTCGTTTACCTCTCCGGAGAGA
TGCATGACCGCATCACGGCAGATACCCAGGCCGTCACCCATGCGGCCTTC
CTGAGCATGGGAACCGCGTGGCAGGCCAACCAGCAATTCCCATGGGAAAT
CTCCCGCTGGGTGGGAGGCATCGAGAACGTGAAGATCAACATTACCCTCC
GCATCTACTCCAACAAGTGGCACGTGTATGCCGGTCTTGCTATCCTGAAC
CCAGCGGCGAAGAAGCAGATCCGGCAGTATGCAGAGTCCGTGACGGACCT
GTACAAGCTCATGATCGAGGGCCGCCGAGACGAACTCAAACGCCGTGTCA
GAGCTGCAGGGGAGGCCGTTTTCAAAGCGGGTACCAACGGCCAGGATCTG
CTATTGAAGGATGAAGTTCTCGACCGTTTCTCCCTGTCAAACCGGGAACG
TGAGCAAGCTCCTCCAAACAGCCATCTCAGTCTGCTTGCCATCGTTGATT
GCTGGTCCAAACTTGGAATTGTTCCCTATGATCATATGATCTGCTCGACA
CCCGTGAGTGCTTGTCCCTTGCTTTCCATGGCGTTCCGGCCTCCTTTCTC
TTTCTTCCCCGCGCAATATATGCAATGTAACGTTGCTTTAAAGCCAGAGT
CTAATCACGGCGCGCGCGTGCAATTGATATAGCTTTTCCGTCTGTGGCTG
GGCGTCACGGAATACCTCTTCCGCAATCCCGAACTCCTCGATGCGGCCCT
AGACACTGCAGTCGACGACAAGACGTTCCGCTCGGATGACCTGGAATTTA
CCTTTGCAGCTCGCGTGAGTACCAACCTGTTTAGCTCCAAAAAAGACCCT
GGCCGCGCTTGCGCGGTTTTATTCCACTCCAATGGATATGGATGGGCATT
AGAAGAACCCAACCCCTCCTCCCAAGCACATTCATGGTGATTTGTACACA
ACACCACCACTGACGTCATTCACTATAATCGTGCAGGCATGGTCGGACTG
CGTATCGTTCGGTGATTTCGAGTCATACCGCGACCGGTTCGAGCGGATCC
AGCAGTACTTTGCTCCCCGATTCCCCGAAGCCGTCAAGCTGGGCAACGAA
ATGATGAAGACCATTCTGGAG
back to top

Coding sequence (CDS) from alignment at ch4:4754450..4756870+

>KJC3_006122-T1 ID=KJC3_006122-T1|Name=KJC3_006122-T1|organism=Aspergillus niger KJC3|type=CDS|length=3141bp|location=Sequence derived from alignment at ch4:4754450..4756870+ (Aspergillus niger KJC3)
ATGATACTTCGCAGCTCGCGCTGTCCAGACATAAACTCATCCAATAAAAC
CAAAAAGCAAAATGTCACTATCTTTCCCAATGGCCACCTGGTTTCCAGAA
TAAGCGATTACATTATTTACAGTGTAGAGGCCGGTGTCATCGACAAGGTA
GTGGAAATGTATGGCCCGTCTACCAAGGTCGGCGCAATTGTCGGTGGTCA
AACGTCCTGCAAGGCTCCTGAGCTCGCGGCTTTCGACAAACACCTTCCCA
AGGACGTAGAGATCGTATCATGCCATTCGCTACATGGCCCTCAAGTCAAC
CCTAAGGGTCAACCTCTGGTCTTGATCCAGCACCGTGCCTCCGACGAAAG
CCTCAACTTCGTCAGGGAAGTCCTGTCATGCTTCGAATCCACGTTCGTTT
ACCTCTCCGGAGAGATGCATGACCGCATCACGGCAGATACCCAGGCCGTC
ACCCATGCGGCCTTCCTGAGCATGGGAACCGCGTGGCAGGCCAACCAGCA
ATTCCCATGGGAAATCTCCCGCTGGGTGGGAGGCATCGAGAACGTGAAGA
TCAACATTACCCTCCGCATCTACTCCAACAAGTGGCACGTGTATGCCGGT
CTTGCTATCCTGAACCCAGCGGCGAAGAAGCAGATCCGGCAGTATGCAGA
GTCCGTGACGGACCTGTACAAGCTCATGATCGAGGGCCGCCGAGACGAAC
TCAAACGCCGTGTCAGAGCTGCAGGGGAGGCCGTTTTCAAAGCGGGTACC
AACGGCCAGGATCTGCTATTGAAGGATGAAGTTCTCGACCGTTTCTCCCT
GTCAAACCGGGAACGTGAGCAAGCTCCTCCAAACAGCCATCTCAGTCTGC
TTGCCATCGTTGATTGCTGGTCCAAACTTGGAATTGTTCCCTATGATCAT
ATGATCTGCTCGACACCCGTGAGTGCTTGTCCCTTGCTTTCCATGGCGTT
CCGGCCTCCTTTCTCTTTCTTCCCCGCGCAATATATGCAATGTAACGTTG
CTTTAAAGCCAGAGTCTAATCACGGCGCGCGCGTGCAATTGATATAGATG
ATACTTCGCAGCTCGCGCTGTCCAGACATAAACTCATCCAATAAAACCAA
AAAGCAAAATGTCACTATCTTTCCCAATGGCCACCTGGTTTCCAGAATAA
GCGATTACATTATTTACAGTGTAGAGGCCGGTGTCATCGACAAGGTAGTG
GAAATGTATGGCCCGTCTACCAAGGTCGGCGCAATTGTCGGTGGTCAAAC
GTCCTGCAAGGCTCCTGAGCTCGCGGCTTTCGACAAACACCTTCCCAAGG
ACGTAGAGATCGTATCATGCCATTCGCTACATGGCCCTCAAGTCAACCCT
AAGGGTCAACCTCTGGTCTTGATCCAGCACCGTGCCTCCGACGAAAGCCT
CAACTTCGTCAGGGAAGTCCTGTCATGCTTCGAATCCACGTTCGTTTACC
TCTCCGGAGAGATGCATGACCGCATCACGGCAGATACCCAGGCCGTCACC
CATGCGGCCTTCCTGAGCATGGGAACCGCGTGGCAGGCCAACCAGCAATT
CCCATGGGAAATCTCCCGCTGGGTGGGAGGCATCGAGAACGTGAAGATCA
ACATTACCCTCCGCATCTACTCCAACAAGTGGCACGTGTATGCCGGTCTT
GCTATCCTGAACCCAGCGGCGAAGAAGCAGATCCGGCAGTATGCAGAGTC
CGTGACGGACCTGTACAAGCTCATGATCGAGGGCCGCCGAGACGAACTCA
AACGCCGTGTCAGAGCTGCAGGGGAGGCCGTTTTCAAAGCGGGTACCAAC
GGCCAGGATCTGCTATTGAAGGATGAAGTTCTCGACCGTTTCTCCCTGTC
AAACCGGGAACGTGAGCAAGCTCCTCCAAACAGCCATCTCAGTCTGCTTG
CCATCGTTGATTGCTGGTCCAAACTTGGAATTGTTCCCTATGATCATATG
ATCTGCTCGACACCCGTGAGTGCTTGTCCCTTGCTTTCCATGGCGTTCCG
GCCTCCTTTCTCTTTCTTCCCCGCGCAATATATGCAATGTAACGTTGCTT
TAAAGCCAGAGTCTAATCACGGCGCGCGCGTGCAATTGATATAGATGATA
CTTCGCAGCTCGCGCTGTCCAGACATAAACTCATCCAATAAAACCAAAAA
GCAAAATGTCACTATCTTTCCCAATGGCCACCTGGTTTCCAGAATAAGCG
ATTACATTATTTACAGTGTAGAGGCCGGTGTCATCGACAAGGTAGTGGAA
ATGTATGGCCCGTCTACCAAGGTCGGCGCAATTGTCGGTGGTCAAACGTC
CTGCAAGGCTCCTGAGCTCGCGGCTTTCGACAAACACCTTCCCAAGGACG
TAGAGATCGTATCATGCCATTCGCTACATGGCCCTCAAGTCAACCCTAAG
GGTCAACCTCTGGTCTTGATCCAGCACCGTGCCTCCGACGAAAGCCTCAA
CTTCGTCAGGGAAGTCCTGTCATGCTTCGAATCCACGTTCGTTTACCTCT
CCGGAGAGATGCATGACCGCATCACGGCAGATACCCAGGCCGTCACCCAT
GCGGCCTTCCTGAGCATGGGAACCGCGTGGCAGGCCAACCAGCAATTCCC
ATGGGAAATCTCCCGCTGGGTGGGAGGCATCGAGAACGTGAAGATCAACA
TTACCCTCCGCATCTACTCCAACAAGTGGCACGTGTATGCCGGTCTTGCT
ATCCTGAACCCAGCGGCGAAGAAGCAGATCCGGCAGTATGCAGAGTCCGT
GACGGACCTGTACAAGCTCATGATCGAGGGCCGCCGAGACGAACTCAAAC
GCCGTGTCAGAGCTGCAGGGGAGGCCGTTTTCAAAGCGGGTACCAACGGC
CAGGATCTGCTATTGAAGGATGAAGTTCTCGACCGTTTCTCCCTGTCAAA
CCGGGAACGTGAGCAAGCTCCTCCAAACAGCCATCTCAGTCTGCTTGCCA
TCGTTGATTGCTGGTCCAAACTTGGAATTGTTCCCTATGATCATATGATC
TGCTCGACACCCGTGAGTGCTTGTCCCTTGCTTTCCATGGCGTTCCGGCC
TCCTTTCTCTTTCTTCCCCGCGCAATATATGCAATGTAACGTTGCTTTAA
AGCCAGAGTCTAATCACGGCGCGCGCGTGCAATTGATATAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055114oxidation-reduction process
GO:0006571tyrosine biosynthetic process
Vocabulary: Molecular Function
TermDefinition
GO:0004665prephenate dehydrogenase (NADP+) activity
GO:0008977prephenate dehydrogenase (NAD+) activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
TYR1KJC3_006122Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006122-T1KJC3_006122-T1-proteinAspergillus niger KJC3polypeptide


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006122-T1.utr5p1KJC3_006122-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006122-T1.exon1KJC3_006122-T1.exon1Aspergillus niger KJC3exon
KJC3_006122-T1.exon2KJC3_006122-T1.exon2Aspergillus niger KJC3exon
KJC3_006122-T1.exon3KJC3_006122-T1.exon3Aspergillus niger KJC3exon
KJC3_006122-T1.exon4KJC3_006122-T1.exon4Aspergillus niger KJC3exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006122-T1.cdsKJC3_006122-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006122-T1.utr3p1KJC3_006122-T1.utr3p1Aspergillus niger KJC3three_prime_UTR
KJC3_006122-T1.utr3p2KJC3_006122-T1.utr3p2Aspergillus niger KJC3three_prime_UTR


Properties
Property NameValue
DBxrefInterPro:IPR008927
DBxrefInterPro:IPR036291
DBxrefInterPro:IPR003099
DBxrefPFAM:PF02153
Productprephenate dehydrogenase (NADP( ))
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4754450..4756870 +
Powered by Drupal