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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4778443..4780484+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006130-T1 ID=KJC3_006130-T1|Name=KJC3_006130-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2042bp|location=Sequence derived from alignment at ch4:4778443..4780484+ (Aspergillus niger KJC3)
AAAGAATGACAGCCAGACTACCAAGAAACAACCCCAAACGTAGATGGAAG
TATCGGACATGTGACTGCCCAGACGTCATCCACTCGACATGAATCTCGCA
ACTCAACAAACAATGAATCCCCAGACTCAAGATGGTCTCTATGCCATAAT
TGCAGGAATGTCGGGATCTGCTAATATTCTGAATAAAGCATATCCCGTTT
AAACCCTCGACTGGCCTCCAATTGCTCTGCTACGGCCCTGTCCGACACCG
CGGGACCAACCAGTTGTCCAAAGGTTCAGCAATGAGAGCTATCCGACTCA
ATCGTGCTGAAACCAGGACACCAAGTCGACAGACCTCGACATACCATGTG
GTTTACAACTGAATCCAGAGAGCGCCCACCATGGCTTCTCAAGTACCGTT
CCTCCACAGCCTTCATCATCGCGACAGTTTGGACCTCTTCGTTCACGGTA
TGCAGACGTTCTACACCAGAAACACAATAGCTGACACCGGCAGGACTACT
TCCTCTATGCTATGGTGAGCACCATCCATACCCACATCTACAACACCATC
TGACATCCTAGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCG
AAGATACCCTATGAAGACCGTACGTCTCACCCTCCACCACAATCAAGCGA
ATCTATACCATCTAACACCCAACCAGGCGAACGCTGGGTCAGCATTCTCC
TCATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCGGATAC
CTGATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGCCTCAT
CCTGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCACCATCGGCT
TCTTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGGTCGTT
GTCGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAACCTCGG
CCAGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAG
GACCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTA
TTCGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGATTTGC
AGTGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATG
ATGCCGACAGCAACAACGAAACCAACCACGACAATCCATCCGATGATAAC
CCACCTCAACCCGACACCACAGACAACGATGCAACCATCATACCCAAGCA
CTCTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCATCCTCA
TATCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAGCCTTTGAC
GCCGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAATCCCCTAA
CAATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAATCCCACTTC
AACTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCCATGAC
CGCTCTCTTCGAGCCCTACTTCGGTATCTCCCCTCCCATCCTTACCCCCG
ACCAACCCACCCACTAACCCATTCCAATAACCACAGGAAAACTAACCGAC
ACTCTTACCCCCCACCCCATAGCAACAGCCACCTTCCTCCTCCTCCCCAT
CCCACTAACTCTCCTGGCGCTCTCCAGCCAACCAACAACAACCCATATCA
CCCTCCTAATGATAAACCTCACCCTCACCGGCCTCCTCGTCAACATAGCA
ACGCCCGCCCTATACCTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCG
CCGACAGCCGGGGATCTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCG
GGATTCAGACAATGGCGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCG
GGGTTCGTAGAGGGGAGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGG
AATGGTTTGTTTGGGGACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTG
ATTGTTGTGGGTATGGGGGTGAGGGTGGAGGTGAGGGGGATG back to topCoding sequence (CDS) from alignment at ch4:4778443..4780484+ >KJC3_006130-T1 ID=KJC3_006130-T1|Name=KJC3_006130-T1|organism=Aspergillus niger KJC3|type=CDS|length=7215bp|location=Sequence derived from alignment at ch4:4778443..4780484+ (Aspergillus niger KJC3)
ATGTGGTTTACAACTGAATCCAGAGAGCGCCCACCATGGCTTCTCAAGTA
CCGTTCCTCCACAGCCTTCATCATCGCGACAGTTTGGACCTCTTCGTTCA
CGGACTACTTCCTCTATGCTATGATCGTTCCCGTCATGCCAACAGCCTTA
GTCGACCGCGCGAAGATACCCTATGAAGACCGCGAACGCTGGGTCAGCAT
TCTCCTCATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCG
GATACCTGATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGC
CTCATCCTGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCACCAT
CGGCTTCTTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGG
TCGTTGTCGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAAC
CTCGGCCAGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCT
TCTAGGACCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGC
CCGTATTCGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGA
TTTGCAGTGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCA
AGATGATGCCGACAGCAACAACGAAACCAACCACGACAATCCATCCGATG
ATAACCCACCTCAACCCGACACCACAGACAACGATGCAACCATCATACCC
AAGCACTCTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCAT
CCTCATATCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAGCCT
TTGACGCCGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAATCC
CCTAACAATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAATCCC
ACTTCAACTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCC
ATGACCGCTCTCTTCGAGCCCTACTTCGGAAAACTAACCGACACTCTTAC
CCCCCACCCCATAGCAACAGCCACCTTCCTCCTCCTCCCCATCCCACTAA
CTCTCCTGGCGCTCTCCAGCCAACCAACAACAACCCATATCACCCTCCTA
ATGATAAACCTCACCCTCACCGGCCTCCTCGTCAACATAGCAACGCCCGC
CCTATACCTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCGCCGACAGC
CGGGGATCTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCGGGATTCAG
ACAATGGCGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCGGGGTTCGT
AGAGGGGAGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGGAATGGTTT
GTTTGGGGACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTGAATGTGGT
TTACAACTGAATCCAGAGAGCGCCCACCATGGCTTCTCAAGTACCGTTCC
TCCACAGCCTTCATCATCGCGACAGTTTGGACCTCTTCGTTCACGGACTA
CTTCCTCTATGCTATGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACC
GCGCGAAGATACCCTATGAAGACCGCGAACGCTGGGTCAGCATTCTCCTC
ATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCGGATACCT
GATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGCCTCATCC
TGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCACCATCGGCTTC
TTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGGTCGTTGT
CGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAACCTCGGCC
AGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAGGA
CCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTATT
CGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGATTTGCAG
TGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATGAT
GCCGACAGCAACAACGAAACCAACCACGACAATCCATCCGATGATAACCC
ACCTCAACCCGACACCACAGACAACGATGCAACCATCATACCCAAGCACT
CTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCATCCTCATA
TCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAGCCTTTGACGC
CGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAATCCCCTAACA
ATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAATCCCACTTCAA
CTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCCATGACCG
CTCTCTTCGAGCCCTACTTCGGAAAACTAACCGACACTCTTACCCCCCAC
CCCATAGCAACAGCCACCTTCCTCCTCCTCCCCATCCCACTAACTCTCCT
GGCGCTCTCCAGCCAACCAACAACAACCCATATCACCCTCCTAATGATAA
ACCTCACCCTCACCGGCCTCCTCGTCAACATAGCAACGCCCGCCCTATAC
CTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCGCCGACAGCCGGGGAT
CTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCGGGATTCAGACAATGG
CGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCGGGGTTCGTAGAGGGG
AGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGGAATGGTTTGTTTGGG
GACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTGAATGTGGTTTACAAC
TGAATCCAGAGAGCGCCCACCATGGCTTCTCAAGTACCGTTCCTCCACAG
CCTTCATCATCGCGACAGTTTGGACCTCTTCGTTCACGGACTACTTCCTC
TATGCTATGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCGAA
GATACCCTATGAAGACCGCGAACGCTGGGTCAGCATTCTCCTCATCTGCG
AAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCGGATACCTGATCGAT
GTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGCCTCATCCTGCTCGG
CGCATCGATGCTCATTCTCTGTCTCGCACGCACCATCGGCTTCTTCGTCA
TCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGGTCGTTGTCGCCGGA
CTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAACCTCGGCCAGACCGT
CGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAGGACCGCTAC
TGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTATTCGCAATG
GCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGATTTGCAGTGATCGA
AAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATGATGCCGACA
GCAACAACGAAACCAACCACGACAATCCATCCGATGATAACCCACCTCAA
CCCGACACCACAGACAACGATGCAACCATCATACCCAAGCACTCTCGTAA
ACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCATCCTCATATCATCCT
GGGGCCTCCTCGTCCACGGCATGATATACGCAGCCTTTGACGCCGTACGT
CCCTTCCCCGTGCACCTCCCAACTATAACCAAATCCCCTAACAATCCACC
AAATAAACCAGACAATCCCCATCTTCGTAGAATCCCACTTCAACTGGACC
CCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCCATGACCGCTCTCTT
CGAGCCCTACTTCGGAAAACTAACCGACACTCTTACCCCCCACCCCATAG
CAACAGCCACCTTCCTCCTCCTCCCCATCCCACTAACTCTCCTGGCGCTC
TCCAGCCAACCAACAACAACCCATATCACCCTCCTAATGATAAACCTCAC
CCTCACCGGCCTCCTCGTCAACATAGCAACGCCCGCCCTATACCTCGAGA
CGCAGCGCGTCCTGGACACCGTGGAGCGCCGACAGCCGGGGATCTTCGGG
CCAAGGGGCGCAGTCGCCCAGGCGTTCGGGATTCAGACAATGGCGCAGTT
TCTGGGACTGAGTTTGGGGCCGTTGGCGGGGTTCGTAGAGGGGAGGTTTG
GGTGGGGGAGTGTGGTTGTGGGGTTGGGAATGGTTTGTTTGGGGACGGGG
ATGGTGGTTGGGGTTGGGTTGAAAGGTGAATGTGGTTTACAACTGAATCC
AGAGAGCGCCCACCATGGCTTCTCAAGTACCGTTCCTCCACAGCCTTCAT
CATCGCGACAGTTTGGACCTCTTCGTTCACGGACTACTTCCTCTATGCTA
TGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCGAAGATACCC
TATGAAGACCGCGAACGCTGGGTCAGCATTCTCCTCATCTGCGAAGCCAC
CGTCGCATTCGTCTGCTGCCCGATATTCGGATACCTGATCGATGTGGCAC
CCACGCGCAAACTTCCCTACCTTCTCGGCCTCATCCTGCTCGGCGCATCG
ATGCTCATTCTCTGTCTCGCACGCACCATCGGCTTCTTCGTCATCGCACG
GCTCCTACAAGGCGGTGCAACCGCCATGGTCGTTGTCGCCGGACTCGCCC
TTCTCACCGACTCTGTCCCATTCGAAAACCTCGGCCAGACCGTCGGATAC
CTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAGGACCGCTACTGGGGGG
TCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTATTCGCAATGGCGTTTG
CCATTGTAGGAATAGACCTGGTAATGCGATTTGCAGTGATCGAAAAGAGA
GTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATGATGCCGACAGCAACAA
CGAAACCAACCACGACAATCCATCCGATGATAACCCACCTCAACCCGACA
CCACAGACAACGATGCAACCATCATACCCAAGCACTCTCGTAAACCCACC
CTCCTACTTCTCCTCCAACAGCCCCGCATCCTCATATCATCCTGGGGCCT
CCTCGTCCACGGCATGATATACGCAGCCTTTGACGCCGTACGTCCCTTCC
CCGTGCACCTCCCAACTATAACCAAATCCCCTAACAATCCACCAAATAAA
CCAGACAATCCCCATCTTCGTAGAATCCCACTTCAACTGGACCCCCCTAG
GCGCCGGCCTAACCTTCCTCCCCTCCTCCATGACCGCTCTCTTCGAGCCC
TACTTCGGAAAACTAACCGACACTCTTACCCCCCACCCCATAGCAACAGC
CACCTTCCTCCTCCTCCCCATCCCACTAACTCTCCTGGCGCTCTCCAGCC
AACCAACAACAACCCATATCACCCTCCTAATGATAAACCTCACCCTCACC
GGCCTCCTCGTCAACATAGCAACGCCCGCCCTATACCTCGAGACGCAGCG
CGTCCTGGACACCGTGGAGCGCCGACAGCCGGGGATCTTCGGGCCAAGGG
GCGCAGTCGCCCAGGCGTTCGGGATTCAGACAATGGCGCAGTTTCTGGGA
CTGAGTTTGGGGCCGTTGGCGGGGTTCGTAGAGGGGAGGTTTGGGTGGGG
GAGTGTGGTTGTGGGGTTGGGAATGGTTTGTTTGGGGACGGGGATGGTGG
TTGGGGTTGGGTTGAAAGGTGAATGTGGTTTACAACTGAATCCAGAGAGC
GCCCACCATGGCTTCTCAAGTACCGTTCCTCCACAGCCTTCATCATCGCG
ACAGTTTGGACCTCTTCGTTCACGGACTACTTCCTCTATGCTATGATCGT
TCCCGTCATGCCAACAGCCTTAGTCGACCGCGCGAAGATACCCTATGAAG
ACCGCGAACGCTGGGTCAGCATTCTCCTCATCTGCGAAGCCACCGTCGCA
TTCGTCTGCTGCCCGATATTCGGATACCTGATCGATGTGGCACCCACGCG
CAAACTTCCCTACCTTCTCGGCCTCATCCTGCTCGGCGCATCGATGCTCA
TTCTCTGTCTCGCACGCACCATCGGCTTCTTCGTCATCGCACGGCTCCTA
CAAGGCGGTGCAACCGCCATGGTCGTTGTCGCCGGACTCGCCCTTCTCAC
CGACTCTGTCCCATTCGAAAACCTCGGCCAGACCGTCGGATACCTAGGGT
CAGCGGTTACGCTAGGGTTCCTTCTAGGACCGCTACTGGGGGGTCTCGTG
TATCGGGTTGCGGGGTATCAGCCCGTATTCGCAATGGCGTTTGCCATTGT
AGGAATAGACCTGGTAATGCGATTTGCAGTGATCGAAAAGAGAGTCGCGA
AGCGGTGGATGGCGCTGTCGCAAGATGATGCCGACAGCAACAACGAAACC
AACCACGACAATCCATCCGATGATAACCCACCTCAACCCGACACCACAGA
CAACGATGCAACCATCATACCCAAGCACTCTCGTAAACCCACCCTCCTAC
TTCTCCTCCAACAGCCCCGCATCCTCATATCATCCTGGGGCCTCCTCGTC
CACGGCATGATATACGCAGCCTTTGACGCCGTACGTCCCTTCCCCGTGCA
CCTCCCAACTATAACCAAATCCCCTAACAATCCACCAAATAAACCAGACA
ATCCCCATCTTCGTAGAATCCCACTTCAACTGGACCCCCCTAGGCGCCGG
CCTAACCTTCCTCCCCTCCTCCATGACCGCTCTCTTCGAGCCCTACTTCG
GAAAACTAACCGACACTCTTACCCCCCACCCCATAGCAACAGCCACCTTC
CTCCTCCTCCCCATCCCACTAACTCTCCTGGCGCTCTCCAGCCAACCAAC
AACAACCCATATCACCCTCCTAATGATAAACCTCACCCTCACCGGCCTCC
TCGTCAACATAGCAACGCCCGCCCTATACCTCGAGACGCAGCGCGTCCTG
GACACCGTGGAGCGCCGACAGCCGGGGATCTTCGGGCCAAGGGGCGCAGT
CGCCCAGGCGTTCGGGATTCAGACAATGGCGCAGTTTCTGGGACTGAGTT
TGGGGCCGTTGGCGGGGTTCGTAGAGGGGAGGTTTGGGTGGGGGAGTGTG
GTTGTGGGGTTGGGAATGGTTTGTTTGGGGACGGGGATGGTGGTTGGGGT
TGGGTTGAAAGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006130-T1.utr5p1 | KJC3_006130-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006130-T1.utr3p1 | KJC3_006130-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | InterPro:IPR001958 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4778443..4780484 + |
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