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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4778443..4780484+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006130-T2 ID=KJC3_006130-T2|Name=KJC3_006130-T2|organism=Aspergillus niger KJC3|type=mRNA|length=2042bp|location=Sequence derived from alignment at ch4:4778443..4780484+ (Aspergillus niger KJC3)
AAAGAATGACAGCCAGACTACCAAGAAACAACCCCAAACGTAGATGGAAG
TATCGGACATGTGACTGCCCAGACGTCATCCACTCGACATGAATCTCGCA
ACTCAACAAACAATGAATCCCCAGACTCAAGATGGTCTCTATGCCATAAT
TGCAGGAATGTCGGGATCTGCTAATATTCTGAATAAAGCATATCCCGTTT
AAACCCTCGACTGGCCTCCAATTGCTCTGCTACGGCCCTGTCCGACACCG
CGGGACCAACCAGTTGTCCAAAGGTTCAGCAATGAGAGCTATCCGACTCA
ATCGTGCTGAAACCAGGACACCAAGTCGACAGACCTCGACATACCATGTG
GTTTACAACTGAATCCAGAGAGCGCCCACCATGGCTTCTCAAGTACCGTT
CCTCCACAGCCTTCATCATCGCGACAGTTTGGACCTCTTCGTTCACGGTA
TGCAGACGTTCTACACCAGAAACACAATAGCTGACACCGGCAGGACTACT
TCCTCTATGCTATGGTGAGCACCATCCATACCCACATCTACAACACCATC
TGACATCCTAGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCG
AAGATACCCTATGAAGACCGTACGTCTCACCCTCCACCACAATCAAGCGA
ATCTATACCATCTAACACCCAACCAGGCGAACGCTGGGTCAGCATTCTCC
TCATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCGGATAC
CTGATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGCCTCAT
CCTGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCACCATCGGCT
TCTTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGGTCGTT
GTCGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAACCTCGG
CCAGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAG
GACCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTA
TTCGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGATTTGC
AGTGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATG
ATGCCGACAGCAACAACGAAACCAACCACGACAATCCATCCGATGATAAC
CCACCTCAACCCGACACCACAGACAACGATGCAACCATCATACCCAAGCA
CTCTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCATCCTCA
TATCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAGCCTTTGAC
GCCGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAATCCCCTAA
CAATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAATCCCACTTC
AACTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCCATGAC
CGCTCTCTTCGAGCCCTACTTCGGTATCTCCCCTCCCATCCTTACCCCCG
ACCAACCCACCCACTAACCCATTCCAATAACCACAGGAAAACTAACCGAC
ACTCTTACCCCCCACCCCATAGCAACAGCCACCTTCCTCCTCCTCCCCAT
CCCACTAACTCTCCTGGCGCTCTCCAGCCAACCAACAACAACCCATATCA
CCCTCCTAATGATAAACCTCACCCTCACCGGCCTCCTCGTCAACATAGCA
ACGCCCGCCCTATACCTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCG
CCGACAGCCGGGGATCTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCG
GGATTCAGACAATGGCGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCG
GGGTTCGTAGAGGGGAGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGG
AATGGTTTGTTTGGGGACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTG
ATTGTTGTGGGTATGGGGGTGAGGGTGGAGGTGAGGGGGATG back to topCoding sequence (CDS) from alignment at ch4:4778443..4780484+ >KJC3_006130-T2 ID=KJC3_006130-T2|Name=KJC3_006130-T2|organism=Aspergillus niger KJC3|type=CDS|length=5292bp|location=Sequence derived from alignment at ch4:4778443..4780484+ (Aspergillus niger KJC3)
ATGATCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCGAAGATACC
CTATGAAGACCGCGAACGCTGGGTCAGCATTCTCCTCATCTGCGAAGCCA
CCGTCGCATTCGTCTGCTGCCCGATATTCGGATACCTGATCGATGTGGCA
CCCACGCGCAAACTTCCCTACCTTCTCGGCCTCATCCTGCTCGGCGCATC
GATGCTCATTCTCTGTCTCGCACGCACCATCGGCTTCTTCGTCATCGCAC
GGCTCCTACAAGGCGGTGCAACCGCCATGGTCGTTGTCGCCGGACTCGCC
CTTCTCACCGACTCTGTCCCATTCGAAAACCTCGGCCAGACCGTCGGATA
CCTAGGGTCAGCGGTTACGCTAGGGTTCCTTCTAGGACCGCTACTGGGGG
GTCTCGTGTATCGGGTTGCGGGGTATCAGCCCGTATTCGCAATGGCGTTT
GCCATTGTAGGAATAGACCTGGTAATGCGATTTGCAGTGATCGAAAAGAG
AGTCGCGAAGCGGTGGATGGCGCTGTCGCAAGATGATGCCGACAGCAACA
ACGAAACCAACCACGACAATCCATCCGATGATAACCCACCTCAACCCGAC
ACCACAGACAACGATGCAACCATCATACCCAAGCACTCTCGTAAACCCAC
CCTCCTACTTCTCCTCCAACAGCCCCGCATCCTCATATCATCCTGGGGCC
TCCTCGTCCACGGCATGATATACGCAGCCTTTGACGCCGTACGTCCCTTC
CCCGTGCACCTCCCAACTATAACCAAATCCCCTAACAATCCACCAAATAA
ACCAGACAATCCCCATCTTCGTAGAATCCCACTTCAACTGGACCCCCCTA
GGCGCCGGCCTAACCTTCCTCCCCTCCTCCATGACCGCTCTCTTCGAGCC
CTACTTCGGAAAACTAACCGACACTCTTACCCCCCACCCCATAGCAACAG
CCACCTTCCTCCTCCTCCCCATCCCACTAACTCTCCTGGCGCTCTCCAGC
CAACCAACAACAACCCATATCACCCTCCTAATGATAAACCTCACCCTCAC
CGGCCTCCTCGTCAACATAGCAACGCCCGCCCTATACCTCGAGACGCAGC
GCGTCCTGGACACCGTGGAGCGCCGACAGCCGGGGATCTTCGGGCCAAGG
GGCGCAGTCGCCCAGGCGTTCGGGATTCAGACAATGGCGCAGTTTCTGGG
ACTGAGTTTGGGGCCGTTGGCGGGGTTCGTAGAGGGGAGGTTTGGGTGGG
GGAGTGTGGTTGTGGGGTTGGGAATGGTTTGTTTGGGGACGGGGATGGTG
GTTGGGGTTGGGTTGAAAGGTGAATGATCGTTCCCGTCATGCCAACAGCC
TTAGTCGACCGCGCGAAGATACCCTATGAAGACCGCGAACGCTGGGTCAG
CATTCTCCTCATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATAT
TCGGATACCTGATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTC
GGCCTCATCCTGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCAC
CATCGGCTTCTTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCA
TGGTCGTTGTCGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAA
AACCTCGGCCAGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTT
CCTTCTAGGACCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATC
AGCCCGTATTCGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATG
CGATTTGCAGTGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTC
GCAAGATGATGCCGACAGCAACAACGAAACCAACCACGACAATCCATCCG
ATGATAACCCACCTCAACCCGACACCACAGACAACGATGCAACCATCATA
CCCAAGCACTCTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCG
CATCCTCATATCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAG
CCTTTGACGCCGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAA
TCCCCTAACAATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAAT
CCCACTTCAACTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCC
TCCATGACCGCTCTCTTCGAGCCCTACTTCGGAAAACTAACCGACACTCT
TACCCCCCACCCCATAGCAACAGCCACCTTCCTCCTCCTCCCCATCCCAC
TAACTCTCCTGGCGCTCTCCAGCCAACCAACAACAACCCATATCACCCTC
CTAATGATAAACCTCACCCTCACCGGCCTCCTCGTCAACATAGCAACGCC
CGCCCTATACCTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCGCCGAC
AGCCGGGGATCTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCGGGATT
CAGACAATGGCGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCGGGGTT
CGTAGAGGGGAGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGGAATGG
TTTGTTTGGGGACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTGAATGA
TCGTTCCCGTCATGCCAACAGCCTTAGTCGACCGCGCGAAGATACCCTAT
GAAGACCGCGAACGCTGGGTCAGCATTCTCCTCATCTGCGAAGCCACCGT
CGCATTCGTCTGCTGCCCGATATTCGGATACCTGATCGATGTGGCACCCA
CGCGCAAACTTCCCTACCTTCTCGGCCTCATCCTGCTCGGCGCATCGATG
CTCATTCTCTGTCTCGCACGCACCATCGGCTTCTTCGTCATCGCACGGCT
CCTACAAGGCGGTGCAACCGCCATGGTCGTTGTCGCCGGACTCGCCCTTC
TCACCGACTCTGTCCCATTCGAAAACCTCGGCCAGACCGTCGGATACCTA
GGGTCAGCGGTTACGCTAGGGTTCCTTCTAGGACCGCTACTGGGGGGTCT
CGTGTATCGGGTTGCGGGGTATCAGCCCGTATTCGCAATGGCGTTTGCCA
TTGTAGGAATAGACCTGGTAATGCGATTTGCAGTGATCGAAAAGAGAGTC
GCGAAGCGGTGGATGGCGCTGTCGCAAGATGATGCCGACAGCAACAACGA
AACCAACCACGACAATCCATCCGATGATAACCCACCTCAACCCGACACCA
CAGACAACGATGCAACCATCATACCCAAGCACTCTCGTAAACCCACCCTC
CTACTTCTCCTCCAACAGCCCCGCATCCTCATATCATCCTGGGGCCTCCT
CGTCCACGGCATGATATACGCAGCCTTTGACGCCGTACGTCCCTTCCCCG
TGCACCTCCCAACTATAACCAAATCCCCTAACAATCCACCAAATAAACCA
GACAATCCCCATCTTCGTAGAATCCCACTTCAACTGGACCCCCCTAGGCG
CCGGCCTAACCTTCCTCCCCTCCTCCATGACCGCTCTCTTCGAGCCCTAC
TTCGGAAAACTAACCGACACTCTTACCCCCCACCCCATAGCAACAGCCAC
CTTCCTCCTCCTCCCCATCCCACTAACTCTCCTGGCGCTCTCCAGCCAAC
CAACAACAACCCATATCACCCTCCTAATGATAAACCTCACCCTCACCGGC
CTCCTCGTCAACATAGCAACGCCCGCCCTATACCTCGAGACGCAGCGCGT
CCTGGACACCGTGGAGCGCCGACAGCCGGGGATCTTCGGGCCAAGGGGCG
CAGTCGCCCAGGCGTTCGGGATTCAGACAATGGCGCAGTTTCTGGGACTG
AGTTTGGGGCCGTTGGCGGGGTTCGTAGAGGGGAGGTTTGGGTGGGGGAG
TGTGGTTGTGGGGTTGGGAATGGTTTGTTTGGGGACGGGGATGGTGGTTG
GGGTTGGGTTGAAAGGTGAATGATCGTTCCCGTCATGCCAACAGCCTTAG
TCGACCGCGCGAAGATACCCTATGAAGACCGCGAACGCTGGGTCAGCATT
CTCCTCATCTGCGAAGCCACCGTCGCATTCGTCTGCTGCCCGATATTCGG
ATACCTGATCGATGTGGCACCCACGCGCAAACTTCCCTACCTTCTCGGCC
TCATCCTGCTCGGCGCATCGATGCTCATTCTCTGTCTCGCACGCACCATC
GGCTTCTTCGTCATCGCACGGCTCCTACAAGGCGGTGCAACCGCCATGGT
CGTTGTCGCCGGACTCGCCCTTCTCACCGACTCTGTCCCATTCGAAAACC
TCGGCCAGACCGTCGGATACCTAGGGTCAGCGGTTACGCTAGGGTTCCTT
CTAGGACCGCTACTGGGGGGTCTCGTGTATCGGGTTGCGGGGTATCAGCC
CGTATTCGCAATGGCGTTTGCCATTGTAGGAATAGACCTGGTAATGCGAT
TTGCAGTGATCGAAAAGAGAGTCGCGAAGCGGTGGATGGCGCTGTCGCAA
GATGATGCCGACAGCAACAACGAAACCAACCACGACAATCCATCCGATGA
TAACCCACCTCAACCCGACACCACAGACAACGATGCAACCATCATACCCA
AGCACTCTCGTAAACCCACCCTCCTACTTCTCCTCCAACAGCCCCGCATC
CTCATATCATCCTGGGGCCTCCTCGTCCACGGCATGATATACGCAGCCTT
TGACGCCGTACGTCCCTTCCCCGTGCACCTCCCAACTATAACCAAATCCC
CTAACAATCCACCAAATAAACCAGACAATCCCCATCTTCGTAGAATCCCA
CTTCAACTGGACCCCCCTAGGCGCCGGCCTAACCTTCCTCCCCTCCTCCA
TGACCGCTCTCTTCGAGCCCTACTTCGGAAAACTAACCGACACTCTTACC
CCCCACCCCATAGCAACAGCCACCTTCCTCCTCCTCCCCATCCCACTAAC
TCTCCTGGCGCTCTCCAGCCAACCAACAACAACCCATATCACCCTCCTAA
TGATAAACCTCACCCTCACCGGCCTCCTCGTCAACATAGCAACGCCCGCC
CTATACCTCGAGACGCAGCGCGTCCTGGACACCGTGGAGCGCCGACAGCC
GGGGATCTTCGGGCCAAGGGGCGCAGTCGCCCAGGCGTTCGGGATTCAGA
CAATGGCGCAGTTTCTGGGACTGAGTTTGGGGCCGTTGGCGGGGTTCGTA
GAGGGGAGGTTTGGGTGGGGGAGTGTGGTTGTGGGGTTGGGAATGGTTTG
TTTGGGGACGGGGATGGTGGTTGGGGTTGGGTTGAAAGGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006130-T2.utr5p1 | KJC3_006130-T2.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006130-T2.utr3p1 | KJC3_006130-T2.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR011701 |
| DBxref | InterPro:IPR001958 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4778443..4780484 + |
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