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KJC3_006133-T1, KJC3_006133-T1 (mRNA) Aspergillus niger KJC3

Overview
NameKJC3_006133-T1
Unique NameKJC3_006133-T1
TypemRNA
OrganismAspergillus niger KJC3
Sequences
The following sequences are available for this feature:

mRNA from alignment at ch4:4795780..4797314-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>KJC3_006133-T1 ID=KJC3_006133-T1|Name=KJC3_006133-T1|organism=Aspergillus niger KJC3|type=mRNA|length=1535bp|location=Sequence derived from alignment at ch4:4795780..4797314- (Aspergillus niger KJC3)
CTGGCTATAAGCCTCATTCATCATGGCATTTCGAGACACCCGCTTCTAGC
GTATTTCTTCACTGTCTAGAGACGCACCATGTCACACTTCCTGCTATTCA
TATTTCGCAAACTCCTCAACACCTTCATCTACTCTGCAAGACACGATCCA
CTACTCGCAAACGCCCATGGACTCTTCCAAAAGAGCCTTCCTACCCAGCC
CACCCACAATGTGCTGGTACTAACCTCAACCATTCTAGGATTAATCCTCG
AGCTCGCAGTAAGCAACCAAATTCCCCCCAGAACGAGCACAAACTAACAA
GTATCCATCATCACCTCAGATCCGCCACATCATCGGCAACGTTGTAATGC
CCCTCCTAATCCTCGAGACCATCGAGAACCAGAGCCCCAATCCAAACAAG
GATGACAACAAGAAATCAAAACCAAAACCCACCATCACTCGCAGCCTCCT
CCAAACCATCACCACCTTCCACCGCAAAAAAGGACTCATTTTTCTCCTCA
ACGGCTTCCAGTACGCCATCTACTACAATGTGAAGTACTTTATAGTTACA
GGTTTACTCTCATCACCTATCGCACGCTTCCCTGAACCTCTCGCTCATAT
CATTGCCTCCGTCGCACTCGCTGAATACCATTTCTTCCGGACAGCAGGCG
CTGTCCTCCCTCCGGCTGAGCAGATGCGCTACGTGCCTCTTGATCTTGAT
TTTAATCGGTGGGATGCGCTTCTCTTACCCACGCTGCTTTATGCTGTAGC
CGAAGCTATCATGATGTATGTGCCGGGGCTATTGCTTTCCCCTCTTGATT
TGGATGAGGTGCTGCTGCTGCCGTCGGACTTGTCAGGCATCACTGCCCTC
GTAAGATCCGATATTCTTGTTGCGGGACTTATGCTCGTTGCTCAAGTCTT
ACTATTGTTTCCGGCGTATATTGTGCTTGTTCTGGTTGAGGGGAGCTTGG
TGCCGGGGGATTGTGAGACATTGATAGCTTTGCCGGAGAAGGAAGAGCAG
GATGAGAAGAAAGAGGATGACAATAGCAATGATGAAATGATGAAGTGGGG
CTGGGATGATGAGGAAGAGGAGGAAGAGGAGGAATGTCCAAAGCAGCAAG
GCAAGCTCATCAAAGACATCTTCAGGTTACCAACACCGTTGCATGTGCTT
GATGTGGTGGAGATGATTAGTGTGAGACAGTTGCTGTATTGTTTGGAGTT
GCATGGGCAGATGTGTTTGTGTTTGGTTGGGGTTGCTGCGATGGTGCAGT
CGGTGGTGTATTTGGTGTCGTAAGGAGGAGGTAAGGTTCTTCAGTTCAGA
TCGTCTGTCCACGATTTAGTTATGTGGGTAGGTTATTATGGGTATGTGTT
CAATTCTGATATTGAAATCGCGCACAGAACACTCGTCTTTCATCCTATGA
GGGATGTCAAGTCACACAAGCGTTATCATCCAAGAAGAGGGACTTGTGGG
TGCACAGAATGAGAGAGAGATTGAGAGTATAGACAAGCATTGCTGATGAA
TGGCATTGCGCATGAAAGAGAGAAAGCAGCAAGGG
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Coding sequence (CDS) from alignment at ch4:4795780..4797314-

>KJC3_006133-T1 ID=KJC3_006133-T1|Name=KJC3_006133-T1|organism=Aspergillus niger KJC3|type=CDS|length=2268bp|location=Sequence derived from alignment at ch4:4795780..4797314- (Aspergillus niger KJC3)
ATCCGCCACATCATCGGCAACGTTGTAATGCCCCTCCTAATCCTCGAGAC
CATCGAGAACCAGAGCCCCAATCCAAACAAGGATGACAACAAGAAATCAA
AACCAAAACCCACCATCACTCGCAGCCTCCTCCAAACCATCACCACCTTC
CACCGCAAAAAAGGACTCATTTTTCTCCTCAACGGCTTCCAGTACGCCAT
CTACTACAATGTGAAGTACTTTATAGTTACAGGTTTACTCTCATCACCTA
TCGCACGCTTCCCTGAACCTCTCGCTCATATCATTGCCTCCGTCGCACTC
GCTGAATACCATTTCTTCCGGACAGCAGGCGCTGTCCTCCCTCCGGCTGA
GCAGATGCGCTACGTGCCTCTTGATCTTGATTTTAATCGGTGGGATGCGC
TTCTCTTACCCACGCTGCTTTATGCTGTAGCCGAAGCTATCATGATGTAT
GTGCCGGGGCTATTGCTTTCCCCTCTTGATTTGGATGAGGTGCTGCTGCT
GCCGTCGGACTTGTCAGGCATCACTGCCCTCGTAAGATCCGATATTCTTG
TTGCGGGACTTATGCTCGTTGCTCAAGTCTTACTATTGTTTCCGGCGTAT
ATTGTGCTTGTTCTGGTTGAGGGGAGCTTGGTGCCGGGGGATTGTGAGAC
ATTGATAGCTTTGCCGGAGAAGGAAGAGCAGGATGAGAAGAAAGAGGATG
ACAATAGCAATGATGAAATGATGAAGTGGGGCTGGGATGATGAGGAAGAG
GAGGAAGAGGAGGAATGTCCAAAGCAGCAAGGCAAGCTCATCAAAGACAT
CTTCAGGTTACCAACACCGTTGCATGTGCTTGATGTGGTGGAGATGATTA
GTGTGAGACAGTTGCTGTATTGTTTGGAGTTGCATGGGCAGATGTGTTTG
TGTTTGGTTGGGGTTGCTGCGATGGTGCAGTCGGTGGTGTATTTGGTGTC
GTAAATGTCACACTTCCTGCTATTCATATTTCGCAAACTCCTCAACACCT
TCATCTACTCTGCAAGACACGATCCACTACTCGCAAACGCCCATGGACTC
TTCCAAAAGAGCCTTCCTACCCAGCCCACCCACAATGTGCTGGTACTAAC
CTCAACCATTCTAGGATTAATCCTCGAGCTCGCAATCCGCCACATCATCG
GCAACGTTGTAATGCCCCTCCTAATCCTCGAGACCATCGAGAACCAGAGC
CCCAATCCAAACAAGGATGACAACAAGAAATCAAAACCAAAACCCACCAT
CACTCGCAGCCTCCTCCAAACCATCACCACCTTCCACCGCAAAAAAGGAC
TCATTTTTCTCCTCAACGGCTTCCAGTACGCCATCTACTACAATGTGAAG
TACTTTATAGTTACAGGTTTACTCTCATCACCTATCGCACGCTTCCCTGA
ACCTCTCGCTCATATCATTGCCTCCGTCGCACTCGCTGAATACCATTTCT
TCCGGACAGCAGGCGCTGTCCTCCCTCCGGCTGAGCAGATGCGCTACGTG
CCTCTTGATCTTGATTTTAATCGGTGGGATGCGCTTCTCTTACCCACGCT
GCTTTATGCTGTAGCCGAAGCTATCATGATGTATGTGCCGGGGCTATTGC
TTTCCCCTCTTGATTTGGATGAGGTGCTGCTGCTGCCGTCGGACTTGTCA
GGCATCACTGCCCTCGTAAGATCCGATATTCTTGTTGCGGGACTTATGCT
CGTTGCTCAAGTCTTACTATTGTTTCCGGCGTATATTGTGCTTGTTCTGG
TTGAGGGGAGCTTGGTGCCGGGGGATTGTGAGACATTGATAGCTTTGCCG
GAGAAGGAAGAGCAGGATGAGAAGAAAGAGGATGACAATAGCAATGATGA
AATGATGAAGTGGGGCTGGGATGATGAGGAAGAGGAGGAAGAGGAGGAAT
GTCCAAAGCAGCAAGGCAAGCTCATCAAAGACATCTTCAGGTTACCAACA
CCGTTGCATGTGCTTGATGTGGTGGAGATGATTAGTGTGAGACAGTTGCT
GTATTGTTTGGAGTTGCATGGGCAGATGTGTTTGTGTTTGGTTGGGGTTG
CTGCGATGGTGCAGTCGGTGGTGTATTTGGTGTCGTAAATGTCACACTTC
CTGCTATTCATATTTCGCAAACTCCTCAACACCTTCATCTACTCTGCAAG
ACACGATCCACTACTCGCAAACGCCCATGGACTCTTCCAAAAGAGCCTTC
CTACCCAGCCCACCCACAATGTGCTGGTACTAACCTCAACCATTCTAGGA
TTAATCCTCGAGCTCGCA
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Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
KJC3_006133KJC3_006133Aspergillus niger KJC3gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006133-T1KJC3_006133-T1-proteinAspergillus niger KJC3polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006133-T1.cdsKJC3_006133-T1.cdsAspergillus niger KJC3CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006133-T1.utr3p2KJC3_006133-T1.utr3p2Aspergillus niger KJC3three_prime_UTR
KJC3_006133-T1.utr3p1KJC3_006133-T1.utr3p1Aspergillus niger KJC3three_prime_UTR


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006133-T1.exon3KJC3_006133-T1.exon3Aspergillus niger KJC3exon
KJC3_006133-T1.exon2KJC3_006133-T1.exon2Aspergillus niger KJC3exon
KJC3_006133-T1.exon1KJC3_006133-T1.exon1Aspergillus niger KJC3exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
KJC3_006133-T1.utr5p1KJC3_006133-T1.utr5p1Aspergillus niger KJC3five_prime_UTR


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Whole Genome Assembly and Annotation of Aspergillus Aspergillus niger KJC32021-10-31
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
ch4supercontigch4:4795780..4797314 -
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