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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4867410..4868318- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006157-T1 ID=KJC3_006157-T1|Name=KJC3_006157-T1|organism=Aspergillus niger KJC3|type=mRNA|length=909bp|location=Sequence derived from alignment at ch4:4867410..4868318- (Aspergillus niger KJC3)
CGCCAGTTGACTCACCCCTACAGCCACAGCCTGGGAGTATACGCCGAAAG
TAAAAAATGAAAAAGTAATCATATGCGATTCGACGTAGATATCTGCACGC
ACCCTCTAGCCACATTAAGAATTACTCCGTAACCCCTGTCCTCACAGACA
TCATCGATCCTGCACTGCACCCAAAGTGGTGCACTGGTTGGTCCCTCCGG
ACCCCTCGGTCCCCTTATCAGGGCGTGAGATCGACCCCCGCAGGTGCCTA
ACTCTCACCACTTACTAGTAGCCGCAGAGTATAAATAAACGGTCCCCTGT
CCCATCGGGCAACTCATCTTACACCTTTCGTCAACATTTTCAGATCCAAA
GTCTTCAGATTTCTTTCCCACTCAAGAACTACTTCTCTTCGTCAGAACAA
GAATTTCGCCAACATGCCTCACCAATACATCGTTCGTTTGTCGGATGTTG
TTCCTGCCCCTGGGTAAATGCTAACGATTTTCATTTTTAGGTCAGCCTCA
ACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAGTGAGTCTTACCACGCTTC
ACTCATGCAAAGATTAGCTCTAATATTTGTATGTGATCAGGGCCAAGAAG
ACTGCCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAA
GGGATTCGTGTATGTACCCTCTCCGCTGTCACGCAGCTTTTCGTATTCCT
CAACTAATTCTTGATAATTTAGTGTCCAATACGATGATGAGCAAGTCTCT
ACCCTCGAGTCCTCCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTC
AATCCAGTAAACAGTGAACCAAAGGTATCAGAGTGGACTGGTCCGGCCAT
ATGAATACTTTGCGGGAGCTTAGATAACTTCTATCTTATTTTTTATATTC
CATGTATGA back to topCoding sequence (CDS) from alignment at ch4:4867410..4868318- >KJC3_006157-T1 ID=KJC3_006157-T1|Name=KJC3_006157-T1|organism=Aspergillus niger KJC3|type=CDS|length=864bp|location=Sequence derived from alignment at ch4:4867410..4868318- (Aspergillus niger KJC3)
TGTCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACA
TCCACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGAC
TGCCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGG
GATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAAT
GCCTCACCAATACATCTGTCCAATACGATGATGAGCAAGTCTCTACCCTC
GAGTCCTCCGACCACATCCACGTCGAGAAAGACAGCGAAGTCTCAATCCA
GTAAGGCCAAGAAGACTGCCACCGACAACGGAGGCAAGATCGTGAAGGAA
TTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAACAAGGAGTCTCCCCCT
GAGGAGCTTGAGAAATGCCTCACCAATACATCTGTCCAATACGATGATGA
GCAAGTCTCTACCCTCGAGTCCTCCGACCACATCCACGTCGAGAAAGACA
GCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTGCCACCGACAACGGAGG
CAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGATTCGTGTCAGCCTCAA
CAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGCCTCACCAATACATCTG
TCCAATACGATGATGAGCAAGTCTCTACCCTCGAGTCCTCCGACCACATC
CACGTCGAGAAAGACAGCGAAGTCTCAATCCAGTAAGGCCAAGAAGACTG
CCACCGACAACGGAGGCAAGATCGTGAAGGAATTTGCGCTGGTCAAGGGA
TTCGTGTCAGCCTCAACAAGGAGTCTCCCCCTGAGGAGCTTGAGAAATGC
CTCACCAATACATC back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006157-T1.utr3p1 | KJC3_006157-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR010259 |
| DBxref | InterPro:IPR037045 |
| DBxref | PFAM:PF05922 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4867410..4868318 - |
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