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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4870665..4873045- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006159-T1 ID=KJC3_006159-T1|Name=KJC3_006159-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2381bp|location=Sequence derived from alignment at ch4:4870665..4873045- (Aspergillus niger KJC3) GATTGCTAACCGGTAGCCCCCAAATACGTCATCTCGTAGACAGGCAGCCA
TCCCTTTTATATTAATATTAATAGTCATGGTCGCGCCAGTGGCCTGGGGT
CCCGCCAGCGAATCCACTTGGATGCCCCTTTTTAAACTCGCCAGCGCCGT
GTTTTCCTTGAGTTTGGCTTCGTTGATTTTTTGGTATCTTCGTCAGCCAA
AAAGTGCCAATCAAGTGCGAACCACCATGCTCTCCGACACTGTATATGAG
CTCTGTCATGACGAAAAGACCGTCACCTCGGAGCTTTTGCAGGATCCGTC
GCAGTCGCCCACCAAGCTATTCCAAAAGCTGTATCATGATCGGAAGACAA
AGTCGCACAAATCCAACTCGAATGAGTCGTTAGACATAGGTGAGAATGAA
CTGCGCAAAGTTCTGCAGTGTGGAAACTGGGGCAGTTCCCAGCCCAGCGA
CCTTTTCTTGAAGGTAATTAACCGGCCAATCCTATCATGTTTCTTTCCTG
AAGGACATATCTGACAATCATCAGATCTACCATGATGCGCTTTGCGCATT
AGAAAAGAATCCCATGTCCGGGGTAGTCTCCCCGCCACTCATGGGCAGCC
ACGGCGTAGTTCCTCTGACTATCATCGCCCCATTGCCTGATCTCTGTCGT
CATATGGCAAACTGCATTGTGCGAGCTGAGAAGGAAGTGTTCCTGGCGAC
GAATTTCTGGATTCACTCCGATGCATCGACGCTGGTAACTAATGCATTTC
GTGAGCTATCCCGACGAGCCGGCGAGCGTGGAACGAAAGTGATTGTCAAG
ATGGTCTATGATCGTGGAGATCCGCAGCAACTGTTCGAGAACCACCTACC
AGTGCCGGAGAAAAAGTATACCAGCGAAAAGGTGCAGCTGCCTGCGGCTC
ATGAGATTCCCAACATCGATCTGCAGGTAGTCAACTACCATCGGCCCATC
TTCGGAACCTTTCATGCCAAGTTCATGGTCATTGATCGGCGTATTGGACT
GCTGCAGAGCAGTAATGTGCAGGATAACGATAACTTAGAGATGATGATCC
ATGTCGAGGGACCCATTGTGGATGGGTTGTATGACACGGCGTTGATTTCG
TGGGGTCGTTCGCTCGACCCTCCACTGCCCATGCTGGACTCTCCCGCCAC
GGAGGCTCCCATTCCTTGTCACGCCTCGCAGCAGCCAGATTATGATGCTC
CCGACCCGGGGCCTCTACCGGAGCTTACCGTCGATGAGCATCACTATGAC
TCGGATATTCGCGCTGAGGCCCAGCGCATGAACGGCCTGCTGTTACCACG
TGAAGGAGAGACCAGAACGCAGGCCGTAACTCGTCGCTTAAGTATGCACC
ACCACCTTTAGTGATTAATACATGATTAGGAGCTAATTCTCATAAATAGA
TACCACAATTCAAACCGACATGTCCGCCGACGCCCCCGAAAGCGACCAAG
ACCCCATCATGCAGCCTTACGTCGTTCTCCCACCGCACGACCCCTTCCCC
ATGGCTGTTATCAACCGTGAACCCTGGGGTGCCCCCAACCACAGCAGCAT
TCACACGCCGCAAAACAGCAGCTTCCTCGCGGCAATCAACAACGCGCAAG
AATCCATCTTCATCCAGACGCCCAACATGAACGCCGAGCCCATCATCCAG
GCCCTCATCGAGGCCATCAAGACCCGCGAGGTCACCGTCACATGCTACTT
GTGTCTGGGGTACAACGACGCTGGCGAATTACTACCGTTCCAGAACGGGA
CGAACGAGATGGTGGCGCATCGGATGTACAAGGCGTTGGACACGGACGAG
CAGCGGTTCCGTCTGCGGATCTTCAACTATGTGGCGAAGGATCAGGTGCG
GCCGATTCATAACAAGTTTAAGCGGAGAAGTTGTCATATTAAATTGATGA
TCGTTGATGAGAGGGTTGCTATTCAAGGTATTTCCAACTCCATACTTCAA
TTCGTATCTCAAGGTGATAAGAAATCTGACGAATACACAGGTAATGGAAA
CCTCGACACCCAATCCTTCTACCACAGCCAGGAGGTAAACCTTCTGCTCG
ACTCCCCATTCGTCTGCCGCGCCTGGCGTGAAGCCATCGACCGGAACCAG
AACACGGCGTACTACGGCGGTGTCAGTCCCGATGACGGCTGCTGGCACGA
TCCAACGACGAATGATATCCCCGTGGGGTCGATTGGCGTTGACCCGGGGC
ACTTTAGCTGGGCACGGGGTGCAGTAGGAGCGGTGCAGAGAGTGAGAGGG
GCGGGTGGTTTCTAGTATAGTATTCTTGCATGGTCTTTTGGATGAGTTTT
ATCATTGTTTAGTAGCGATGTGTTAGACATGTACGAGTTTGGCATATTTT
ATAGCATGTTTCAATAGTCATGCAGTTGGAT back to topCoding sequence (CDS) from alignment at ch4:4870665..4873045- >KJC3_006159-T1 ID=KJC3_006159-T1|Name=KJC3_006159-T1|organism=Aspergillus niger KJC3|type=CDS|length=8028bp|location=Sequence derived from alignment at ch4:4870665..4873045- (Aspergillus niger KJC3) GTAATGGAAACCTCGACACCCAATCCTTCTACCACAGCCAGGAGGTAAAC CTTCTGCTCGACTCCCCATTCGTCTGCCGCGCCTGGCGTGAAGCCATCGA CCGGAACCAGAACACGGCGTACTACGGCGGTGTCAGTCCCGATGACGGCT GCTGGCACGATCCAACGACGAATGATATCCCCGTGGGGTCGATTGGCGTT GACCCGGGGCACTTTAGCTGGGCACGGGGTGCAGTAGGAGCGGTGCAGAG AGTGAGAGGGGCGGGTGGTTTCTAGATACCACAATTCAAACCGACATGTC CGCCGACGCCCCCGAAAGCGACCAAGACCCCATCATGCAGCCTTACGTCG TTCTCCCACCGCACGACCCCTTCCCCATGGCTGTTATCAACCGTGAACCC TGGGGTGCCCCCAACCACAGCAGCATTCACACGCCGCAAAACAGCAGCTT CCTCGCGGCAATCAACAACGCGCAAGAATCCATCTTCATCCAGACGCCCA ACATGAACGCCGAGCCCATCATCCAGGCCCTCATCGAGGCCATCAAGACC CGCGAGGTCACCGTCACATGCTACTTGTGTCTGGGGTACAACGACGCTGG CGAATTACTACCGTTCCAGAACGGGACGAACGAGATGGTGGCGCATCGGA TGTACAAGGCGTTGGACACGGACGAGCAGCGGTTCCGTCTGCGGATCTTC AACTATGTGGCGAAGGATCAGGTGCGGCCGATTCATAACAAGTTTAAGCG GAGAAGTTGTCATATTAAATTGATGATCGTTGATGAGAGGGTTGCTATTC AAGATCTACCATGATGCGCTTTGCGCATTAGAAAAGAATCCCATGTCCGG GGTAGTCTCCCCGCCACTCATGGGCAGCCACGGCGTAGTTCCTCTGACTA TCATCGCCCCATTGCCTGATCTCTGTCGTCATATGGCAAACTGCATTGTG CGAGCTGAGAAGGAAGTGTTCCTGGCGACGAATTTCTGGATTCACTCCGA TGCATCGACGCTGGTAACTAATGCATTTCGTGAGCTATCCCGACGAGCCG GCGAGCGTGGAACGAAAGTGATTGTCAAGATGGTCTATGATCGTGGAGAT CCGCAGCAACTGTTCGAGAACCACCTACCAGTGCCGGAGAAAAAGTATAC CAGCGAAAAGGTGCAGCTGCCTGCGGCTCATGAGATTCCCAACATCGATC TGCAGGTAGTCAACTACCATCGGCCCATCTTCGGAACCTTTCATGCCAAG TTCATGGTCATTGATCGGCGTATTGGACTGCTGCAGAGCAGTAATGTGCA GGATAACGATAACTTAGAGATGATGATCCATGTCGAGGGACCCATTGTGG ATGGGTTGTATGACACGGCGTTGATTTCGTGGGGTCGTTCGCTCGACCCT CCACTGCCCATGCTGGACTCTCCCGCCACGGAGGCTCCCATTCCTTGTCA CGCCTCGCAGCAGCCAGATTATGATGCTCCCGACCCGGGGCCTCTACCGG AGCTTACCGTCGATGAGCATCACTATGACTCGGATATTCGCGCTGAGGCC CAGCGCATGAACGGCCTGCTGTTACCACGTGAAGGAGAGACCAGAACGCA GGCCGTAACTCGTCGCTTAAATGGTCGCGCCAGTGGCCTGGGGTCCCGCC AGCGAATCCACTTGGATGCCCCTTTTTAAACTCGCCAGCGCCGTGTTTTC CTTGAGTTTGGCTTCGTTGATTTTTTGGTATCTTCGTCAGCCAAAAAGTG CCAATCAAGTGCGAACCACCATGCTCTCCGACACTGTATATGAGCTCTGT CATGACGAAAAGACCGTCACCTCGGAGCTTTTGCAGGATCCGTCGCAGTC GCCCACCAAGCTATTCCAAAAGCTGTATCATGATCGGAAGACAAAGTCGC ACAAATCCAACTCGAATGAGTCGTTAGACATAGGTGAGAATGAACTGCGC AAAGTTCTGCAGTGTGGAAACTGGGGCAGTTCCCAGCCCAGCGACCTTTT CTTGAAGGTAATGGAAACCTCGACACCCAATCCTTCTACCACAGCCAGGA GGTAAACCTTCTGCTCGACTCCCCATTCGTCTGCCGCGCCTGGCGTGAAG CCATCGACCGGAACCAGAACACGGCGTACTACGGCGGTGTCAGTCCCGAT GACGGCTGCTGGCACGATCCAACGACGAATGATATCCCCGTGGGGTCGAT TGGCGTTGACCCGGGGCACTTTAGCTGGGCACGGGGTGCAGTAGGAGCGG TGCAGAGAGTGAGAGGGGCGGGTGGTTTCTAGATACCACAATTCAAACCG ACATGTCCGCCGACGCCCCCGAAAGCGACCAAGACCCCATCATGCAGCCT TACGTCGTTCTCCCACCGCACGACCCCTTCCCCATGGCTGTTATCAACCG TGAACCCTGGGGTGCCCCCAACCACAGCAGCATTCACACGCCGCAAAACA GCAGCTTCCTCGCGGCAATCAACAACGCGCAAGAATCCATCTTCATCCAG ACGCCCAACATGAACGCCGAGCCCATCATCCAGGCCCTCATCGAGGCCAT CAAGACCCGCGAGGTCACCGTCACATGCTACTTGTGTCTGGGGTACAACG ACGCTGGCGAATTACTACCGTTCCAGAACGGGACGAACGAGATGGTGGCG CATCGGATGTACAAGGCGTTGGACACGGACGAGCAGCGGTTCCGTCTGCG GATCTTCAACTATGTGGCGAAGGATCAGGTGCGGCCGATTCATAACAAGT TTAAGCGGAGAAGTTGTCATATTAAATTGATGATCGTTGATGAGAGGGTT GCTATTCAAGATCTACCATGATGCGCTTTGCGCATTAGAAAAGAATCCCA TGTCCGGGGTAGTCTCCCCGCCACTCATGGGCAGCCACGGCGTAGTTCCT CTGACTATCATCGCCCCATTGCCTGATCTCTGTCGTCATATGGCAAACTG CATTGTGCGAGCTGAGAAGGAAGTGTTCCTGGCGACGAATTTCTGGATTC ACTCCGATGCATCGACGCTGGTAACTAATGCATTTCGTGAGCTATCCCGA CGAGCCGGCGAGCGTGGAACGAAAGTGATTGTCAAGATGGTCTATGATCG TGGAGATCCGCAGCAACTGTTCGAGAACCACCTACCAGTGCCGGAGAAAA AGTATACCAGCGAAAAGGTGCAGCTGCCTGCGGCTCATGAGATTCCCAAC ATCGATCTGCAGGTAGTCAACTACCATCGGCCCATCTTCGGAACCTTTCA TGCCAAGTTCATGGTCATTGATCGGCGTATTGGACTGCTGCAGAGCAGTA ATGTGCAGGATAACGATAACTTAGAGATGATGATCCATGTCGAGGGACCC ATTGTGGATGGGTTGTATGACACGGCGTTGATTTCGTGGGGTCGTTCGCT CGACCCTCCACTGCCCATGCTGGACTCTCCCGCCACGGAGGCTCCCATTC CTTGTCACGCCTCGCAGCAGCCAGATTATGATGCTCCCGACCCGGGGCCT CTACCGGAGCTTACCGTCGATGAGCATCACTATGACTCGGATATTCGCGC TGAGGCCCAGCGCATGAACGGCCTGCTGTTACCACGTGAAGGAGAGACCA GAACGCAGGCCGTAACTCGTCGCTTAAATGGTCGCGCCAGTGGCCTGGGG TCCCGCCAGCGAATCCACTTGGATGCCCCTTTTTAAACTCGCCAGCGCCG TGTTTTCCTTGAGTTTGGCTTCGTTGATTTTTTGGTATCTTCGTCAGCCA AAAAGTGCCAATCAAGTGCGAACCACCATGCTCTCCGACACTGTATATGA GCTCTGTCATGACGAAAAGACCGTCACCTCGGAGCTTTTGCAGGATCCGT CGCAGTCGCCCACCAAGCTATTCCAAAAGCTGTATCATGATCGGAAGACA AAGTCGCACAAATCCAACTCGAATGAGTCGTTAGACATAGGTGAGAATGA ACTGCGCAAAGTTCTGCAGTGTGGAAACTGGGGCAGTTCCCAGCCCAGCG ACCTTTTCTTGAAGGTAATGGAAACCTCGACACCCAATCCTTCTACCACA GCCAGGAGGTAAACCTTCTGCTCGACTCCCCATTCGTCTGCCGCGCCTGG CGTGAAGCCATCGACCGGAACCAGAACACGGCGTACTACGGCGGTGTCAG TCCCGATGACGGCTGCTGGCACGATCCAACGACGAATGATATCCCCGTGG GGTCGATTGGCGTTGACCCGGGGCACTTTAGCTGGGCACGGGGTGCAGTA GGAGCGGTGCAGAGAGTGAGAGGGGCGGGTGGTTTCTAGATACCACAATT CAAACCGACATGTCCGCCGACGCCCCCGAAAGCGACCAAGACCCCATCAT GCAGCCTTACGTCGTTCTCCCACCGCACGACCCCTTCCCCATGGCTGTTA TCAACCGTGAACCCTGGGGTGCCCCCAACCACAGCAGCATTCACACGCCG CAAAACAGCAGCTTCCTCGCGGCAATCAACAACGCGCAAGAATCCATCTT CATCCAGACGCCCAACATGAACGCCGAGCCCATCATCCAGGCCCTCATCG AGGCCATCAAGACCCGCGAGGTCACCGTCACATGCTACTTGTGTCTGGGG TACAACGACGCTGGCGAATTACTACCGTTCCAGAACGGGACGAACGAGAT GGTGGCGCATCGGATGTACAAGGCGTTGGACACGGACGAGCAGCGGTTCC GTCTGCGGATCTTCAACTATGTGGCGAAGGATCAGGTGCGGCCGATTCAT AACAAGTTTAAGCGGAGAAGTTGTCATATTAAATTGATGATCGTTGATGA GAGGGTTGCTATTCAAGATCTACCATGATGCGCTTTGCGCATTAGAAAAG AATCCCATGTCCGGGGTAGTCTCCCCGCCACTCATGGGCAGCCACGGCGT AGTTCCTCTGACTATCATCGCCCCATTGCCTGATCTCTGTCGTCATATGG CAAACTGCATTGTGCGAGCTGAGAAGGAAGTGTTCCTGGCGACGAATTTC TGGATTCACTCCGATGCATCGACGCTGGTAACTAATGCATTTCGTGAGCT ATCCCGACGAGCCGGCGAGCGTGGAACGAAAGTGATTGTCAAGATGGTCT ATGATCGTGGAGATCCGCAGCAACTGTTCGAGAACCACCTACCAGTGCCG GAGAAAAAGTATACCAGCGAAAAGGTGCAGCTGCCTGCGGCTCATGAGAT TCCCAACATCGATCTGCAGGTAGTCAACTACCATCGGCCCATCTTCGGAA CCTTTCATGCCAAGTTCATGGTCATTGATCGGCGTATTGGACTGCTGCAG AGCAGTAATGTGCAGGATAACGATAACTTAGAGATGATGATCCATGTCGA GGGACCCATTGTGGATGGGTTGTATGACACGGCGTTGATTTCGTGGGGTC GTTCGCTCGACCCTCCACTGCCCATGCTGGACTCTCCCGCCACGGAGGCT CCCATTCCTTGTCACGCCTCGCAGCAGCCAGATTATGATGCTCCCGACCC GGGGCCTCTACCGGAGCTTACCGTCGATGAGCATCACTATGACTCGGATA TTCGCGCTGAGGCCCAGCGCATGAACGGCCTGCTGTTACCACGTGAAGGA GAGACCAGAACGCAGGCCGTAACTCGTCGCTTAAATGGTCGCGCCAGTGG CCTGGGGTCCCGCCAGCGAATCCACTTGGATGCCCCTTTTTAAACTCGCC AGCGCCGTGTTTTCCTTGAGTTTGGCTTCGTTGATTTTTTGGTATCTTCG TCAGCCAAAAAGTGCCAATCAAGTGCGAACCACCATGCTCTCCGACACTG TATATGAGCTCTGTCATGACGAAAAGACCGTCACCTCGGAGCTTTTGCAG GATCCGTCGCAGTCGCCCACCAAGCTATTCCAAAAGCTGTATCATGATCG GAAGACAAAGTCGCACAAATCCAACTCGAATGAGTCGTTAGACATAGGTG AGAATGAACTGCGCAAAGTTCTGCAGTGTGGAAACTGGGGCAGTTCCCAG CCCAGCGACCTTTTCTTGAAGGTAATGGAAACCTCGACACCCAATCCTTC TACCACAGCCAGGAGGTAAACCTTCTGCTCGACTCCCCATTCGTCTGCCG CGCCTGGCGTGAAGCCATCGACCGGAACCAGAACACGGCGTACTACGGCG GTGTCAGTCCCGATGACGGCTGCTGGCACGATCCAACGACGAATGATATC CCCGTGGGGTCGATTGGCGTTGACCCGGGGCACTTTAGCTGGGCACGGGG TGCAGTAGGAGCGGTGCAGAGAGTGAGAGGGGCGGGTGGTTTCTAGATAC CACAATTCAAACCGACATGTCCGCCGACGCCCCCGAAAGCGACCAAGACC CCATCATGCAGCCTTACGTCGTTCTCCCACCGCACGACCCCTTCCCCATG GCTGTTATCAACCGTGAACCCTGGGGTGCCCCCAACCACAGCAGCATTCA CACGCCGCAAAACAGCAGCTTCCTCGCGGCAATCAACAACGCGCAAGAAT CCATCTTCATCCAGACGCCCAACATGAACGCCGAGCCCATCATCCAGGCC CTCATCGAGGCCATCAAGACCCGCGAGGTCACCGTCACATGCTACTTGTG TCTGGGGTACAACGACGCTGGCGAATTACTACCGTTCCAGAACGGGACGA ACGAGATGGTGGCGCATCGGATGTACAAGGCGTTGGACACGGACGAGCAG CGGTTCCGTCTGCGGATCTTCAACTATGTGGCGAAGGATCAGGTGCGGCC GATTCATAACAAGTTTAAGCGGAGAAGTTGTCATATTAAATTGATGATCG TTGATGAGAGGGTTGCTATTCAAGATCTACCATGATGCGCTTTGCGCATT AGAAAAGAATCCCATGTCCGGGGTAGTCTCCCCGCCACTCATGGGCAGCC ACGGCGTAGTTCCTCTGACTATCATCGCCCCATTGCCTGATCTCTGTCGT CATATGGCAAACTGCATTGTGCGAGCTGAGAAGGAAGTGTTCCTGGCGAC GAATTTCTGGATTCACTCCGATGCATCGACGCTGGTAACTAATGCATTTC GTGAGCTATCCCGACGAGCCGGCGAGCGTGGAACGAAAGTGATTGTCAAG ATGGTCTATGATCGTGGAGATCCGCAGCAACTGTTCGAGAACCACCTACC AGTGCCGGAGAAAAAGTATACCAGCGAAAAGGTGCAGCTGCCTGCGGCTC ATGAGATTCCCAACATCGATCTGCAGGTAGTCAACTACCATCGGCCCATC TTCGGAACCTTTCATGCCAAGTTCATGGTCATTGATCGGCGTATTGGACT GCTGCAGAGCAGTAATGTGCAGGATAACGATAACTTAGAGATGATGATCC ATGTCGAGGGACCCATTGTGGATGGGTTGTATGACACGGCGTTGATTTCG TGGGGTCGTTCGCTCGACCCTCCACTGCCCATGCTGGACTCTCCCGCCAC GGAGGCTCCCATTCCTTGTCACGCCTCGCAGCAGCCAGATTATGATGCTC CCGACCCGGGGCCTCTACCGGAGCTTACCGTCGATGAGCATCACTATGAC TCGGATATTCGCGCTGAGGCCCAGCGCATGAACGGCCTGCTGTTACCACG TGAAGGAGAGACCAGAACGCAGGCCGTAACTCGTCGCTTAAATGGTCGCG CCAGTGGCCTGGGGTCCCGCCAGCGAATCCACTTGGATGCCCCTTTTTAA ACTCGCCAGCGCCGTGTTTTCCTTGAGTTTGGCTTCGTTGATTTTTTGGT ATCTTCGTCAGCCAAAAAGTGCCAATCAAGTGCGAACCACCATGCTCTCC GACACTGTATATGAGCTCTGTCATGACGAAAAGACCGTCACCTCGGAGCT TTTGCAGGATCCGTCGCAGTCGCCCACCAAGCTATTCCAAAAGCTGTATC ATGATCGGAAGACAAAGTCGCACAAATCCAACTCGAATGAGTCGTTAGAC ATAGGTGAGAATGAACTGCGCAAAGTTCTGCAGTGTGGAAACTGGGGCAG TTCCCAGCCCAGCGACCTTTTCTTGAAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
Term | Definition |
GO:0003824 | catalytic activity |
GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006159-T1.utr3p1 | KJC3_006159-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Feature Name | Unique Name | Species | Type |
KJC3_006159-T1.utr5p1 | KJC3_006159-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
Properties
Property Name | Value |
DBxref | InterPro:IPR001736 |
DBxref | InterPro:IPR001202 |
DBxref | InterPro:IPR025202 |
DBxref | PFAM:PF13091 |
Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
Aligned Feature | Feature Type | Alignment Location |
ch4 | supercontig | ch4:4870665..4873045 - |
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