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Sequences
The following sequences are available for this feature:
mRNA from alignment at ch4:4873422..4875901+ Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >KJC3_006160-T1 ID=KJC3_006160-T1|Name=KJC3_006160-T1|organism=Aspergillus niger KJC3|type=mRNA|length=2480bp|location=Sequence derived from alignment at ch4:4873422..4875901+ (Aspergillus niger KJC3)
CCAGCATAGAGCCATGATTGCACCTTGCAGCTCAATTATGGGTACCACCT
CATCGTGCTAACTTTATTAACGAACTACTTACCTAGTTTGGTGATTACTC
AGTGAATCCCCGTTAACCTCGGTGTTAAGCAGCAGCTTCTCCTCACCAGT
TCGGACTTGCCCCCGAGCCTGTCTTTATTAAGCCGGCTTTATCAATCTAT
CCCCGAATTCCTGTATCCCCCTTCTTTTACTCCGCATTGCTCTCGTTCAT
CTCCGGACTTTCACCATTGCTTGCTCATTACATACCATTGTTGATCGATT
GCGACGATGTGAGTAATTGCCTTCTCTCAATACCGCTTTTTCTGCCTGTT
TCATAGTCACTGACAGTCCTCAGGGTCTACACAGCATCCTTTGCCTTCTT
CGAGGCACTCTGGGAGGTACGGCCCCCGTCGACAATGAAATGTGGGTCAA
GCTAACCTTCCAGGCTGGTGTCTCCCATGTCTTTGTCAATCTGGGCTCCG
ACCACCCCTCCATCCTCGAGGCTATGGTCAAGGGCCAGAAAGAAAAGCCC
AATGCTTTCCCTAAGATCATAACTTGTCCCAACGAGGTGAGCCGATCAAT
GCAATCTCGTTGTGGATCTCGCCCGACACTAACCCCGCATGCGTCCTTGG
CAGATGGTGGCCCTGTCTATGGCCGACGGTTATGCTCGCTTGACTGGGGA
ACCTCAATGCGTGATTGTTCATGTCGATGTCGGCACCCAGGGGCTCGCTG
CCGCTATCCACAACGCCTCTTGTGGCCGAGCCCCCGTCTTGATCTTCGCC
GGTCTCTCCCCCTATACGATTGAGGGGGAGATGCGTGGCTCGCGCACTGA
ATACATTCATTGGATCCAAGATGTTCCCGACCAGAAGCAGATCGTCTCGC
AATACTGCCGGTATGCCGCAGAAATTCGATCTGGCAAGAACATCAAGCAG
ATGGTCAACCGCGCTCTTCAATTCGCCACCAGTGATCCTAAGGGGCCCGT
CTACCTGGCCGGTGCACGAGAAGTTATGGAGGAGGAAATTACTCCTTACA
CTCTCAATCAGAGCCATTGGGTGTCTGTCTCCCCGTCTGCTCTCCCAACT
GAAGGTGTTGAGTTGATTGCATCAGAGCTCGCAGCTGCCAAAAATCCCTT
GGTCATTGTCGGCTACTCTGGCCGAGAAGCGCGAGGTGTCCACGAGTTGG
TCACCCTCGCCAACACCTTCCAGGGCATCCGCGTCCTCGACACTGGCGGC
TGCGATATGTGCTTTCCCGGAGACCATCCGGCATACCTAGGCATGCGCTT
TGGTGTTCATGATGCCATCAAATCCGCCGACTTCATTCTCGTTGCCGACT
GTGATGTACCCTGGATTCCGACGCTCTGCAAGCCGTCCGACTCTGCCCGC
ATCATTCACGTCGACGTCGACCCCCTCAAGCAGCAGATTCCCGTCGCCTA
CATCCCCACAATTGCCACCTTCCGCGCTGAGTCGGCAACCGCTTTCAAGC
AGCTCAATGAATACATTGCATCCAACCCCTCCATTCAGCAGACAATCCAG
TCGGATGAGAACCGTGCTCGGGGCAAGCGCCGCGCAGAGGCTTTCAAGAA
GACCCGCCAGGCTATCTACAACCTCGCCCGCTTACCTCCCGGCGGGGATG
TCGCCCCCCTCAATGCCAACTATCTCATCAGCCAACTACGCCAGTCCTGC
CCTTCCGATACCATTTGGGCCATTGAATCCGTGACCCTCACCGCCAACGT
GGCCGACCAGATTGCGCCTACACTGCCGAAATCCTGGATCAACTGCGGCG
GTGGTGGTCTCGGCTGGTCCGGCGGCGGTGCCCTGGGCATCAAGCTCGCC
ACTGACGCTAAACACGGCGGGTCAAACAAAGGCAAATTTGTCTGCCAGAT
CGTCGGGGATGGCACCTATCTCTTTTCCGTTCCAGGGTCTGTTTACTGGG
TTGCTCGTCGCTATAACATTCCTATTCTTACGATCGTGCTCAACAACAAG
GGCTGGAATGCCCCTCGTCGCAGTATGCTTCTCGTCCATCCGAATGGCGA
TGGATCTCGTGCTACGAACGAAGACCTCAACATCTCTTTCGCCCCGACTC
CCGACTATCCGGGTATTGCGACAGCTGCATCCGGTGGTACCTTTTGGGGC
GCTCAGGCTGCTAATGTTGCTCAGCTGAGAAAGCTATTACCTGAGGCGAT
CAAGAGTGTGCAGAATGGTACCACGGCTGTTTTGGAGGCGCAGCTCGATG
GAACGCAGGGGAAGTACGTCGCCGCGAAGCCTTCGCTGTGATGTTTTTTT
ATCTTATTATTACGCTTGTCACGTCTATATGAGGATTATGTTTATGATAC
AGTCTTATGCGTAAGACTGATGCCGCCTCCGACCAGGACACATACTAGCA
GAAACAGAAATCATTATGCTCAATATAAATACTACATTTAACAGGGCTCC
TATAACCAGTATACAGACAATGACCTGCTC back to topCoding sequence (CDS) from alignment at ch4:4873422..4875901+ >KJC3_006160-T1 ID=KJC3_006160-T1|Name=KJC3_006160-T1|organism=Aspergillus niger KJC3|type=CDS|length=7224bp|location=Sequence derived from alignment at ch4:4873422..4875901+ (Aspergillus niger KJC3)
ATGGTCTACACAGCATCCTTTGCCTTCTTCGAGGCACTCTGGGAGGCTGG
TGTCTCCCATGTCTTTGTCAATCTGGGCTCCGACCACCCCTCCATCCTCG
AGGCTATGGTCAAGGGCCAGAAAGAAAAGCCCAATGCTTTCCCTAAGATC
ATAACTTGTCCCAACGAGATGGTGGCCCTGTCTATGGCCGACGGTTATGC
TCGCTTGACTGGGGAACCTCAATGCGTGATTGTTCATGTCGATGTCGGCA
CCCAGGGGCTCGCTGCCGCTATCCACAACGCCTCTTGTGGCCGAGCCCCC
GTCTTGATCTTCGCCGGTCTCTCCCCCTATACGATTGAGGGGGAGATGCG
TGGCTCGCGCACTGAATACATTCATTGGATCCAAGATGTTCCCGACCAGA
AGCAGATCGTCTCGCAATACTGCCGGTATGCCGCAGAAATTCGATCTGGC
AAGAACATCAAGCAGATGGTCAACCGCGCTCTTCAATTCGCCACCAGTGA
TCCTAAGGGGCCCGTCTACCTGGCCGGTGCACGAGAAGTTATGGAGGAGG
AAATTACTCCTTACACTCTCAATCAGAGCCATTGGGTGTCTGTCTCCCCG
TCTGCTCTCCCAACTGAAGGTGTTGAGTTGATTGCATCAGAGCTCGCAGC
TGCCAAAAATCCCTTGGTCATTGTCGGCTACTCTGGCCGAGAAGCGCGAG
GTGTCCACGAGTTGGTCACCCTCGCCAACACCTTCCAGGGCATCCGCGTC
CTCGACACTGGCGGCTGCGATATGTGCTTTCCCGGAGACCATCCGGCATA
CCTAGGCATGCGCTTTGGTGTTCATGATGCCATCAAATCCGCCGACTTCA
TTCTCGTTGCCGACTGTGATGTACCCTGGATTCCGACGCTCTGCAAGCCG
TCCGACTCTGCCCGCATCATTCACGTCGACGTCGACCCCCTCAAGCAGCA
GATTCCCGTCGCCTACATCCCCACAATTGCCACCTTCCGCGCTGAGTCGG
CAACCGCTTTCAAGCAGCTCAATGAATACATTGCATCCAACCCCTCCATT
CAGCAGACAATCCAGTCGGATGAGAACCGTGCTCGGGGCAAGCGCCGCGC
AGAGGCTTTCAAGAAGACCCGCCAGGCTATCTACAACCTCGCCCGCTTAC
CTCCCGGCGGGGATGTCGCCCCCCTCAATGCCAACTATCTCATCAGCCAA
CTACGCCAGTCCTGCCCTTCCGATACCATTTGGGCCATTGAATCCGTGAC
CCTCACCGCCAACGTGGCCGACCAGATTGCGCCTACACTGCCGAAATCCT
GGATCAACTGCGGCGGTGGTGGTCTCGGCTGGTCCGGCGGCGGTGCCCTG
GGCATCAAGCTCGCCACTGACGCTAAACACGGCGGGTCAAACAAAGGCAA
ATTTGTCTGCCAGATCGTCGGGGATGGCACCTATCTCTTTTCCGTTCCAG
GGTCTGTTTACTGGGTTGCTCGTCGCTATAACATTCCTATTCTTACGATC
GTGCTCAACAACAAGGGCTGGAATGCCCCTCGTCGCAGTATGCTTCTCGT
CCATCCGAATGGCGATGGATCTCGTGCTACGAACGAAGACCTCAACATCT
CTTTCGCCCCGACTCCCGACTATCCGGGTATTGCGACAGCTGCATCCGGT
GGTACCTTTTGGGGCGCTCAGGCTGCTAATGTTGCTCAGCTGAGAAAGCT
ATTACCTGAGGCGATCAAGAGTGTGCAGAATGGTACCACGGCTGTTTTGG
AGGCGCAGCTCGATGGAACGCAGGGGAAGTACGTCGCCGCGAAGCCTTCG
CTGTGAATGGTCTACACAGCATCCTTTGCCTTCTTCGAGGCACTCTGGGA
GGCTGGTGTCTCCCATGTCTTTGTCAATCTGGGCTCCGACCACCCCTCCA
TCCTCGAGGCTATGGTCAAGGGCCAGAAAGAAAAGCCCAATGCTTTCCCT
AAGATCATAACTTGTCCCAACGAGATGGTGGCCCTGTCTATGGCCGACGG
TTATGCTCGCTTGACTGGGGAACCTCAATGCGTGATTGTTCATGTCGATG
TCGGCACCCAGGGGCTCGCTGCCGCTATCCACAACGCCTCTTGTGGCCGA
GCCCCCGTCTTGATCTTCGCCGGTCTCTCCCCCTATACGATTGAGGGGGA
GATGCGTGGCTCGCGCACTGAATACATTCATTGGATCCAAGATGTTCCCG
ACCAGAAGCAGATCGTCTCGCAATACTGCCGGTATGCCGCAGAAATTCGA
TCTGGCAAGAACATCAAGCAGATGGTCAACCGCGCTCTTCAATTCGCCAC
CAGTGATCCTAAGGGGCCCGTCTACCTGGCCGGTGCACGAGAAGTTATGG
AGGAGGAAATTACTCCTTACACTCTCAATCAGAGCCATTGGGTGTCTGTC
TCCCCGTCTGCTCTCCCAACTGAAGGTGTTGAGTTGATTGCATCAGAGCT
CGCAGCTGCCAAAAATCCCTTGGTCATTGTCGGCTACTCTGGCCGAGAAG
CGCGAGGTGTCCACGAGTTGGTCACCCTCGCCAACACCTTCCAGGGCATC
CGCGTCCTCGACACTGGCGGCTGCGATATGTGCTTTCCCGGAGACCATCC
GGCATACCTAGGCATGCGCTTTGGTGTTCATGATGCCATCAAATCCGCCG
ACTTCATTCTCGTTGCCGACTGTGATGTACCCTGGATTCCGACGCTCTGC
AAGCCGTCCGACTCTGCCCGCATCATTCACGTCGACGTCGACCCCCTCAA
GCAGCAGATTCCCGTCGCCTACATCCCCACAATTGCCACCTTCCGCGCTG
AGTCGGCAACCGCTTTCAAGCAGCTCAATGAATACATTGCATCCAACCCC
TCCATTCAGCAGACAATCCAGTCGGATGAGAACCGTGCTCGGGGCAAGCG
CCGCGCAGAGGCTTTCAAGAAGACCCGCCAGGCTATCTACAACCTCGCCC
GCTTACCTCCCGGCGGGGATGTCGCCCCCCTCAATGCCAACTATCTCATC
AGCCAACTACGCCAGTCCTGCCCTTCCGATACCATTTGGGCCATTGAATC
CGTGACCCTCACCGCCAACGTGGCCGACCAGATTGCGCCTACACTGCCGA
AATCCTGGATCAACTGCGGCGGTGGTGGTCTCGGCTGGTCCGGCGGCGGT
GCCCTGGGCATCAAGCTCGCCACTGACGCTAAACACGGCGGGTCAAACAA
AGGCAAATTTGTCTGCCAGATCGTCGGGGATGGCACCTATCTCTTTTCCG
TTCCAGGGTCTGTTTACTGGGTTGCTCGTCGCTATAACATTCCTATTCTT
ACGATCGTGCTCAACAACAAGGGCTGGAATGCCCCTCGTCGCAGTATGCT
TCTCGTCCATCCGAATGGCGATGGATCTCGTGCTACGAACGAAGACCTCA
ACATCTCTTTCGCCCCGACTCCCGACTATCCGGGTATTGCGACAGCTGCA
TCCGGTGGTACCTTTTGGGGCGCTCAGGCTGCTAATGTTGCTCAGCTGAG
AAAGCTATTACCTGAGGCGATCAAGAGTGTGCAGAATGGTACCACGGCTG
TTTTGGAGGCGCAGCTCGATGGAACGCAGGGGAAGTACGTCGCCGCGAAG
CCTTCGCTGTGAATGGTCTACACAGCATCCTTTGCCTTCTTCGAGGCACT
CTGGGAGGCTGGTGTCTCCCATGTCTTTGTCAATCTGGGCTCCGACCACC
CCTCCATCCTCGAGGCTATGGTCAAGGGCCAGAAAGAAAAGCCCAATGCT
TTCCCTAAGATCATAACTTGTCCCAACGAGATGGTGGCCCTGTCTATGGC
CGACGGTTATGCTCGCTTGACTGGGGAACCTCAATGCGTGATTGTTCATG
TCGATGTCGGCACCCAGGGGCTCGCTGCCGCTATCCACAACGCCTCTTGT
GGCCGAGCCCCCGTCTTGATCTTCGCCGGTCTCTCCCCCTATACGATTGA
GGGGGAGATGCGTGGCTCGCGCACTGAATACATTCATTGGATCCAAGATG
TTCCCGACCAGAAGCAGATCGTCTCGCAATACTGCCGGTATGCCGCAGAA
ATTCGATCTGGCAAGAACATCAAGCAGATGGTCAACCGCGCTCTTCAATT
CGCCACCAGTGATCCTAAGGGGCCCGTCTACCTGGCCGGTGCACGAGAAG
TTATGGAGGAGGAAATTACTCCTTACACTCTCAATCAGAGCCATTGGGTG
TCTGTCTCCCCGTCTGCTCTCCCAACTGAAGGTGTTGAGTTGATTGCATC
AGAGCTCGCAGCTGCCAAAAATCCCTTGGTCATTGTCGGCTACTCTGGCC
GAGAAGCGCGAGGTGTCCACGAGTTGGTCACCCTCGCCAACACCTTCCAG
GGCATCCGCGTCCTCGACACTGGCGGCTGCGATATGTGCTTTCCCGGAGA
CCATCCGGCATACCTAGGCATGCGCTTTGGTGTTCATGATGCCATCAAAT
CCGCCGACTTCATTCTCGTTGCCGACTGTGATGTACCCTGGATTCCGACG
CTCTGCAAGCCGTCCGACTCTGCCCGCATCATTCACGTCGACGTCGACCC
CCTCAAGCAGCAGATTCCCGTCGCCTACATCCCCACAATTGCCACCTTCC
GCGCTGAGTCGGCAACCGCTTTCAAGCAGCTCAATGAATACATTGCATCC
AACCCCTCCATTCAGCAGACAATCCAGTCGGATGAGAACCGTGCTCGGGG
CAAGCGCCGCGCAGAGGCTTTCAAGAAGACCCGCCAGGCTATCTACAACC
TCGCCCGCTTACCTCCCGGCGGGGATGTCGCCCCCCTCAATGCCAACTAT
CTCATCAGCCAACTACGCCAGTCCTGCCCTTCCGATACCATTTGGGCCAT
TGAATCCGTGACCCTCACCGCCAACGTGGCCGACCAGATTGCGCCTACAC
TGCCGAAATCCTGGATCAACTGCGGCGGTGGTGGTCTCGGCTGGTCCGGC
GGCGGTGCCCTGGGCATCAAGCTCGCCACTGACGCTAAACACGGCGGGTC
AAACAAAGGCAAATTTGTCTGCCAGATCGTCGGGGATGGCACCTATCTCT
TTTCCGTTCCAGGGTCTGTTTACTGGGTTGCTCGTCGCTATAACATTCCT
ATTCTTACGATCGTGCTCAACAACAAGGGCTGGAATGCCCCTCGTCGCAG
TATGCTTCTCGTCCATCCGAATGGCGATGGATCTCGTGCTACGAACGAAG
ACCTCAACATCTCTTTCGCCCCGACTCCCGACTATCCGGGTATTGCGACA
GCTGCATCCGGTGGTACCTTTTGGGGCGCTCAGGCTGCTAATGTTGCTCA
GCTGAGAAAGCTATTACCTGAGGCGATCAAGAGTGTGCAGAATGGTACCA
CGGCTGTTTTGGAGGCGCAGCTCGATGGAACGCAGGGGAAGTACGTCGCC
GCGAAGCCTTCGCTGTGAATGGTCTACACAGCATCCTTTGCCTTCTTCGA
GGCACTCTGGGAGGCTGGTGTCTCCCATGTCTTTGTCAATCTGGGCTCCG
ACCACCCCTCCATCCTCGAGGCTATGGTCAAGGGCCAGAAAGAAAAGCCC
AATGCTTTCCCTAAGATCATAACTTGTCCCAACGAGATGGTGGCCCTGTC
TATGGCCGACGGTTATGCTCGCTTGACTGGGGAACCTCAATGCGTGATTG
TTCATGTCGATGTCGGCACCCAGGGGCTCGCTGCCGCTATCCACAACGCC
TCTTGTGGCCGAGCCCCCGTCTTGATCTTCGCCGGTCTCTCCCCCTATAC
GATTGAGGGGGAGATGCGTGGCTCGCGCACTGAATACATTCATTGGATCC
AAGATGTTCCCGACCAGAAGCAGATCGTCTCGCAATACTGCCGGTATGCC
GCAGAAATTCGATCTGGCAAGAACATCAAGCAGATGGTCAACCGCGCTCT
TCAATTCGCCACCAGTGATCCTAAGGGGCCCGTCTACCTGGCCGGTGCAC
GAGAAGTTATGGAGGAGGAAATTACTCCTTACACTCTCAATCAGAGCCAT
TGGGTGTCTGTCTCCCCGTCTGCTCTCCCAACTGAAGGTGTTGAGTTGAT
TGCATCAGAGCTCGCAGCTGCCAAAAATCCCTTGGTCATTGTCGGCTACT
CTGGCCGAGAAGCGCGAGGTGTCCACGAGTTGGTCACCCTCGCCAACACC
TTCCAGGGCATCCGCGTCCTCGACACTGGCGGCTGCGATATGTGCTTTCC
CGGAGACCATCCGGCATACCTAGGCATGCGCTTTGGTGTTCATGATGCCA
TCAAATCCGCCGACTTCATTCTCGTTGCCGACTGTGATGTACCCTGGATT
CCGACGCTCTGCAAGCCGTCCGACTCTGCCCGCATCATTCACGTCGACGT
CGACCCCCTCAAGCAGCAGATTCCCGTCGCCTACATCCCCACAATTGCCA
CCTTCCGCGCTGAGTCGGCAACCGCTTTCAAGCAGCTCAATGAATACATT
GCATCCAACCCCTCCATTCAGCAGACAATCCAGTCGGATGAGAACCGTGC
TCGGGGCAAGCGCCGCGCAGAGGCTTTCAAGAAGACCCGCCAGGCTATCT
ACAACCTCGCCCGCTTACCTCCCGGCGGGGATGTCGCCCCCCTCAATGCC
AACTATCTCATCAGCCAACTACGCCAGTCCTGCCCTTCCGATACCATTTG
GGCCATTGAATCCGTGACCCTCACCGCCAACGTGGCCGACCAGATTGCGC
CTACACTGCCGAAATCCTGGATCAACTGCGGCGGTGGTGGTCTCGGCTGG
TCCGGCGGCGGTGCCCTGGGCATCAAGCTCGCCACTGACGCTAAACACGG
CGGGTCAAACAAAGGCAAATTTGTCTGCCAGATCGTCGGGGATGGCACCT
ATCTCTTTTCCGTTCCAGGGTCTGTTTACTGGGTTGCTCGTCGCTATAAC
ATTCCTATTCTTACGATCGTGCTCAACAACAAGGGCTGGAATGCCCCTCG
TCGCAGTATGCTTCTCGTCCATCCGAATGGCGATGGATCTCGTGCTACGA
ACGAAGACCTCAACATCTCTTTCGCCCCGACTCCCGACTATCCGGGTATT
GCGACAGCTGCATCCGGTGGTACCTTTTGGGGCGCTCAGGCTGCTAATGT
TGCTCAGCTGAGAAAGCTATTACCTGAGGCGATCAAGAGTGTGCAGAATG
GTACCACGGCTGTTTTGGAGGCGCAGCTCGATGGAACGCAGGGGAAGTAC
GTCGCCGCGAAGCCTTCGCTGTGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003824 | catalytic activity |
| GO:0000287 | magnesium ion binding |
| GO:0030976 | thiamine pyrophosphate binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006160-T1.utr5p1 | KJC3_006160-T1.utr5p1 | Aspergillus niger KJC3 | five_prime_UTR |
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type |
|---|
| KJC3_006160-T1.utr3p1 | KJC3_006160-T1.utr3p1 | Aspergillus niger KJC3 | three_prime_UTR |
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR029035 |
| DBxref | InterPro:IPR029061 |
| DBxref | InterPro:IPR011766 |
| DBxref | InterPro:IPR012001 |
| DBxref | InterPro:IPR012000 |
| DBxref | PFAM:PF02776 |
| DBxref | PFAM:PF00205 |
| DBxref | PFAM:PF02775 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| ch4 | supercontig | ch4:4873422..4875901 + |
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